Factsheet for HORVU5Hr1G000690.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

plastid 1
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome
Any Predictor:	peroxisome, plastid
iPSORT:	plastid
MultiLoc:	peroxisome
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G066630.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G34850.1	HORVU2Hr1G066630.1	AT1G62940.1	23632852

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G003100.1	Wheat	cytosol	85.78	93.56
TraesCS5D01G003600.1	Wheat	cytosol	86.0	93.35
TraesCS5A01G002900.1	Wheat	cytosol	86.0	93.13
Os07t0411300-00	Rice	cytosol	79.65	89.88
EER98407	Sorghum	cytosol	75.27	82.3
Zm00001d019478_P001	Maize	cytosol	74.62	81.77
KRH29108	Soybean	cytosol	60.18	71.06
VIT_03s0038g01460.t01	Wine grape	cytosol	60.39	70.41
CDX75466	Canola	cytosol	60.18	70.15
Bra011566.1-P	Field mustard	cytosol	59.96	69.9
CDX69091	Canola	cytosol	59.96	69.9
CDY34811	Canola	cytosol	59.74	69.64
PGSC0003DMT400004133	Potato	cytosol	57.77	69.47
CDY58814	Canola	cytosol	59.52	69.39
Bra034658.1-P	Field mustard	cytosol	59.52	69.39
CDY17490	Canola	cytosol	59.3	69.13
CDY40656	Canola	cytosol	59.08	68.88
Bra017681.1-P	Field mustard	cytosol	59.08	68.88
Solyc01g111070.2.1	Tomato	cytosol	57.55	68.67
CDX72506	Canola	cytosol	58.86	68.62
AT4G34850.1	Thale cress	cytosol	58.64	68.37
KRH24136	Soybean	cytosol	54.27	65.78
HORVU1Hr1G042510.2	Barley	cytosol	45.95	43.21
HORVU1Hr1G004830.1	Barley	cytosol	34.14	39.29
HORVU3Hr1G006040.1	Barley	cytosol	33.7	38.69
HORVU6Hr1G055000.1	Barley	cytosol, mitochondrion	33.48	38.64
HORVU2Hr1G003280.1	Barley	cytosol	33.04	38.04
HORVU2Hr1G005220.3	Barley	cytosol	32.82	37.97
HORVU6Hr1G074060.2	Barley	cytosol	33.48	37.97
HORVU1Hr1G089540.1	Barley	mitochondrion	33.04	37.84
HORVU2Hr1G116390.2	Barley	cytosol	32.6	37.44
HORVU6Hr1G003020.2	Barley	cytosol	33.26	36.8
HORVU4Hr1G003250.1	Barley	cytosol	33.7	36.75
GSMUA_Achr5P17860_001	Banana	cytosol, nucleus, peroxisome	59.08	35.9
HORVU7Hr1G024480.2	Barley	cytosol	30.85	35.79
HORVU2Hr1G002640.1	Barley	cytosol	30.85	35.79
HORVU1Hr1G064330.1	Barley	cytosol	30.63	35.44
HORVU7Hr1G009190.1	Barley	cytosol	29.76	35.23
HORVU5Hr1G093950.1	Barley	cytosol	30.63	34.74
HORVU2Hr1G004170.4	Barley	plastid	32.6	34.41
HORVU7Hr1G020920.2	Barley	cytosol, peroxisome	32.6	32.11

Protein Annotations

MapMan:21.8.1.4	Gene3D:3.40.47.10	UniProt:A0A287Q5R0	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009653	GO:GO:0009987
GO:GO:0010584	GO:GO:0016043	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	GO:GO:0019748
GO:GO:0030639	GO:GO:0080110	GO:GO:0090439	EnsemblPlantsGene:HORVU5Hr1G000690	EnsemblPlants:HORVU5Hr1G000690.2	InterPro:IPR016039
PFAM:PF00195	PFAM:PF02797	PANTHER:PTHR11877	PANTHER:PTHR11877:SF31	InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901
InterPro:Thiolase-like	UniParc:UPI000B478D3F	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:2550621..2552346

Molecular Weight (calculated)

49729.8 Da

IEP (calculated)

5.524

GRAVY (calculated)

-0.165

Length

457 amino acids

Sequence
(BLAST)

001: QQLINPPSCT EIPSFGINPI LLYTTMVSAR DVDTNKQQQQ QQATCLLAPN PGKATILALG HAFPQQLVMQ DYVVEGFMRN TNCNDPELKE KLTRLCKTTT
101: VKTRYVVMSE EILKSYPELA QEGLPTMKQR LDISNKAVTQ MATEASLACV EAWGGDLSAI THLVYVSSSE ARFPGGDLHL ARALGLSPDV RRVMLAFTGC
201: SGGVAGLRVA KGLAESCPGA RVLLATSETT VAGFRPPSPD RPYDLVGVAL FGDGAGAAVV GADPTAVERP LFELHSALQR FLPDTEKTID GRLTEEGIKF
301: QLGRELPHII EAHVESFCQK LIKEHPGAAA AEDVPLTYDK MFWAVHPGGP AILTKMEGRL GLDGGKLRAS RSALRDFGNA SSNTIVYVLE NMVEESRRQR
401: MTEAPVLENM VEESRRQRTT EPEMEPECEW GLILAFGPGI TFEGILARNL QARIAAN

Best Arabidopsis Sequence Match ( AT4G34850.1 )
(BLAST)

001: MGSIDAAVLG SEKKSNPGKA TILALGKAFP HQLVMQEYLV DGYFKTTKCD DPELKQKLTR LCKTTTVKTR YVVMSEEILK KYPELAIEGG STVTQRLDIC
101: NDAVTEMAVE ASRACIKNWG RSISDITHVV YVSSSEARLP GGDLYLAKGL GLSPDTHRVL LYFVGCSGGV AGLRVAKDIA ENNPGSRVLL ATSETTIIGF
201: KPPSVDRPYD LVGVALFGDG AGAMIIGSDP DPICEKPLFE LHTAIQNFLP ETEKTIDGRL TEQGINFKLS RELPQIIEDN VENFCKKLIG KAGLAHKNYN
301: QMFWAVHPGG PAILNRIEKR LNLSPEKLSP SRRALMDYGN ASSNSIVYVL EYMLEESKKV RNMNEEENEW GLILAFGPGV TFEGIIARNL DV

Arabidopsis Description

PKSBPSKB [Source:UniProtKB/TrEMBL;Acc:A0A178UTW2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.