Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G379600.1 | Wheat | cytosol | 74.69 | 87.25 |
| TraesCS5A01G379400.1 | Wheat | mitochondrion | 76.18 | 80.16 |
| TraesCS5A01G379500.1 | Wheat | cytosol, mitochondrion | 76.67 | 79.43 |
| TraesCS5B01G383300.1 | Wheat | cytosol, mitochondrion | 73.7 | 76.35 |
| TraesCS1D01G359600.1 | Wheat | cytosol | 66.25 | 67.77 |
| OQU85107 | Sorghum | cytosol | 64.02 | 64.66 |
| OQU85124 | Sorghum | cytosol | 63.77 | 64.41 |
| KXG36274 | Sorghum | cytosol | 62.03 | 62.97 |
| EER99418 | Sorghum | cytosol | 62.03 | 62.5 |
| EES08732 | Sorghum | cytosol | 61.04 | 60.89 |
| EES09995 | Sorghum | cytosol | 61.04 | 60.89 |
| EES15677 | Sorghum | cytosol | 59.31 | 59.01 |
| Os07t0501100-01 | Rice | cytosol | 56.58 | 56.3 |
| HORVU6Hr1G055000.1 | Barley | cytosol, mitochondrion | 49.88 | 50.76 |
| HORVU2Hr1G003280.1 | Barley | cytosol | 49.88 | 50.63 |
| HORVU7Hr1G024480.2 | Barley | cytosol | 49.13 | 50.25 |
| HORVU7Hr1G009190.1 | Barley | cytosol | 47.89 | 50.0 |
| HORVU6Hr1G003020.2 | Barley | cytosol | 50.87 | 49.64 |
| HORVU6Hr1G074060.2 | Barley | cytosol | 49.13 | 49.13 |
| HORVU4Hr1G003250.1 | Barley | cytosol | 50.37 | 48.45 |
| HORVU2Hr1G002640.1 | Barley | cytosol | 44.17 | 45.18 |
| HORVU2Hr1G005220.3 | Barley | cytosol | 42.68 | 43.54 |
| HORVU2Hr1G116390.2 | Barley | cytosol | 42.18 | 42.71 |
| HORVU1Hr1G089540.1 | Barley | mitochondrion | 41.19 | 41.6 |
| HORVU7Hr1G020920.2 | Barley | cytosol, peroxisome | 46.4 | 40.3 |
| HORVU1Hr1G004830.1 | Barley | cytosol | 39.45 | 40.05 |
| HORVU2Hr1G004170.4 | Barley | plastid | 42.43 | 39.49 |
| HORVU3Hr1G006040.1 | Barley | cytosol | 38.21 | 38.69 |
| HORVU1Hr1G064330.1 | Barley | cytosol | 37.22 | 37.97 |
| HORVU5Hr1G000690.2 | Barley | cytosol, peroxisome | 34.74 | 30.63 |
| HORVU1Hr1G042510.2 | Barley | cytosol | 34.74 | 28.81 |
| VIT_12s0059g01780.t01 | Wine grape | extracellular, mitochondrion, nucleus | 2.48 | 0.53 |
Protein Annotations
| Gene3D:3.40.47.10 | MapMan:50.2.3 | UniProt:A0A287SAW4 | InterPro:Chalcone/stilbene_synth_C | InterPro:Chalcone/stilbene_synthase_N | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016740 | GO:GO:0016746 |
| GO:GO:0016747 | EnsemblPlantsGene:HORVU5Hr1G093950 | EnsemblPlants:HORVU5Hr1G093950.1 | InterPro:IPR016039 | PFAM:PF00195 | PFAM:PF02797 |
| PIRSF:PIRSF000451 | PANTHER:PTHR11877 | PANTHER:PTHR11877:SF34 | InterPro:Polyketide_synthase_type-III | SUPFAM:SSF53901 | InterPro:Thiolase-like |
| UniParc:UPI000B47DD06 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:593426672..593428536
Molecular Weight (calculated)
43662.4 Da
IEP (calculated)
9.008
GRAVY (calculated)
-0.241
Length
403 amino acids
Sequence
(BLAST)
(BLAST)
001: HPYCERSGRR TYYGHGNRPA DPSRAACGRS GGRARHRHGE PGELHAPGRL RRVLLPRHQQ RAPCRAQGQA QKKSKKSGNE RRYVHLDEEL LGAHRDFSDR
101: ALSTLDARID MASAAVPELA ASAAAKAVVE WGRPAADVTH LVFSTYSGGK APSADLLLAS LLGLRPTVSR TILSLNGCSG GGRALQLAKE LAENNRGARV
201: LVACSELTLI AFYGPEEGRL DTILGQGIFG DGAGAVIVGA DPVNSVERPL FEMAFATQTT IPETEDEITM RLMKGGLDFH VSVRVPKLLK SNVERCLIDA
301: FESIGVSATW NDLFWAIHPG GRAILDHVEE LLGLDAEKLA ASRRVLREYG NMSGATVIFV LDELRRRRAR GQEVAEWGVM VAFGPGITIE TMVLHATGSL
401: KEK
101: ALSTLDARID MASAAVPELA ASAAAKAVVE WGRPAADVTH LVFSTYSGGK APSADLLLAS LLGLRPTVSR TILSLNGCSG GGRALQLAKE LAENNRGARV
201: LVACSELTLI AFYGPEEGRL DTILGQGIFG DGAGAVIVGA DPVNSVERPL FEMAFATQTT IPETEDEITM RLMKGGLDFH VSVRVPKLLK SNVERCLIDA
301: FESIGVSATW NDLFWAIHPG GRAILDHVEE LLGLDAEKLA ASRRVLREYG NMSGATVIFV LDELRRRRAR GQEVAEWGVM VAFGPGITIE TMVLHATGSL
401: KEK
001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
Arabidopsis Description
PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.