Factsheet for HORVU3Hr1G006040.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 1
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G005220.3	Barley	cytosol	54.77	55.19
HORVU1Hr1G004830.1	Barley	cytosol	54.52	54.66
HORVU2Hr1G116390.2	Barley	cytosol	54.27	54.27
HORVU1Hr1G089540.1	Barley	mitochondrion	52.51	52.38
HORVU2Hr1G004170.4	Barley	plastid	54.52	50.12
HORVU6Hr1G055000.1	Barley	cytosol, mitochondrion	49.5	49.75
HORVU4Hr1G003250.1	Barley	cytosol	48.99	46.54
HORVU6Hr1G074060.2	Barley	cytosol	46.98	46.4
HORVU7Hr1G009190.1	Barley	cytosol	44.47	45.85
HORVU2Hr1G003280.1	Barley	cytosol	45.48	45.59
HORVU1Hr1G064330.1	Barley	cytosol	44.97	45.32
HORVU7Hr1G024480.2	Barley	cytosol	43.72	44.16
HORVU6Hr1G003020.2	Barley	cytosol	44.47	42.86
HORVU2Hr1G002640.1	Barley	cytosol	40.95	41.37
HORVU7Hr1G020920.2	Barley	cytosol, peroxisome	44.97	38.58
HORVU5Hr1G093950.1	Barley	cytosol	38.69	38.21
HORVU5Hr1G000690.2	Barley	cytosol, peroxisome	38.69	33.7
HORVU1Hr1G042510.2	Barley	cytosol	37.44	30.66

Protein Annotations

KEGG:00941+2.3.1.74	Gene3D:3.40.47.10	MapMan:9.2.2.1.1.1	EMBL:AK361904	EMBL:AK363350	InterPro:Chalcone/stilbene_synth_C
InterPro:Chalcone/stilbene_synthase_AS	InterPro:Chalcone/stilbene_synthase_N	UniProt:F2DDD7	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	EnsemblPlantsGene:HORVU3Hr1G006040
EnsemblPlants:HORVU3Hr1G006040.1	InterPro:IPR016039	PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	ScanProsite:PS00441
PANTHER:PTHR11877	PANTHER:PTHR11877:SF27	InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901	InterPro:Thiolase-like	UniParc:UPI0002005EA1
SEG:seg	:	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DDD7]

Coordinates

chrchr3H:-:15003545..15008744

Molecular Weight (calculated)

42474.0 Da

IEP (calculated)

6.236

GRAVY (calculated)

-0.008

Length

398 amino acids

Sequence
(BLAST)

001: MGSQGEVPRV HGQKKAMGTA SILAIGTANP SNVLEQSTFP DFYFRVTNSD HKQHLKDKFR RICEKSTIKK RHLYINEALL AANPEMATYM APSLDMRQAI
101: ISEKVPELGA AAATAALKEW GGRIEDITHL IVGSTSGGSD MPGADYHIMR LLGLSPSVRR VALYHQGCFV GAAALRLAKD LAENNGGARV LAVCVETNLM
201: YFRGVDDAHM DNLVCQALFG DGASAIVVGA DADPAAEKPL FDVVHATQHL IPETGSAIQG LIREVGLTFG LISEVPSLIA KNIEAGLQDT LDGAGVADGA
301: DRNSMFWAVH PGGRAILDKV EAALGLEPEK MRASRKVLAE YGNMGSACAW FVLDEIRRWS AAEGCGTTGE GCEWGVLFGF GPGLTMDTVL LRSRAAHT

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.