Factsheet for HORVU7Hr1G024480.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
peroxisome 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G016200.1	Wheat	cytosol	87.06	85.96
TraesCS2B01G019200.1	Wheat	cytosol	85.03	84.38
HORVU2Hr1G003280.1	Barley	cytosol	68.02	67.51
HORVU7Hr1G009190.1	Barley	cytosol	65.23	66.58
HORVU2Hr1G002640.1	Barley	cytosol	65.74	65.74
HORVU6Hr1G055000.1	Barley	cytosol, mitochondrion	58.38	58.08
HORVU6Hr1G074060.2	Barley	cytosol	59.14	57.82
HORVU4Hr1G003250.1	Barley	cytosol	56.85	53.46
HORVU7Hr1G020920.2	Barley	cytosol, peroxisome	61.17	51.94
HORVU5Hr1G093950.1	Barley	cytosol	50.25	49.13
HORVU6Hr1G003020.2	Barley	cytosol	51.02	48.67
HORVU2Hr1G005220.3	Barley	cytosol	46.95	46.84
HORVU2Hr1G116390.2	Barley	cytosol	46.19	45.73
HORVU1Hr1G089540.1	Barley	mitochondrion	46.19	45.61
HORVU1Hr1G004830.1	Barley	cytosol	45.43	45.09
HORVU3Hr1G006040.1	Barley	cytosol	44.16	43.72
HORVU2Hr1G004170.4	Barley	plastid	46.7	42.49
HORVU1Hr1G064330.1	Barley	cytosol	40.61	40.51
HORVU5Hr1G000690.2	Barley	cytosol, peroxisome	35.79	30.85
HORVU1Hr1G042510.2	Barley	cytosol	35.03	28.4
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.55	0.74

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747
EnsemblPlantsGene:HORVU7Hr1G024480	EnsemblPlants:HORVU7Hr1G024480.2	InterPro:IPR016039	UniProt:M0VC56	PFAM:PF00195	PFAM:PF02797
PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF34	InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901	InterPro:Thiolase-like
UniParc:UPI000295E430	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:39338000..39339588

Molecular Weight (calculated)

42859.6 Da

IEP (calculated)

6.322

GRAVY (calculated)

-0.018

Length

394 amino acids

Sequence
(BLAST)

001: MASRASSVHE IRRERRAEGP AVVLAIGTAN PVNCVSQDEY PDYYFRVTKT EHLTDLKDTF KKLCKITGMG KRYFYHTEEL LDAHPDFLHR TSASIDARLE
101: IAAPELAASA AAKAIAEWGR PATDITHLIV STNSAAHAPS VDFRLASLLG LRPSVCRTML HLNGYSGGCA ALRLAKDLAE NNRGARVLVA CVELTVTSFR
201: GPDEEDCFDT LISQGLFSDG AGAVIVGADA VRPVERPLFE MVSVSQAVVP ETEHLLNMRL GSGGVCGDVS TELPRMVGHN IGQCLLDAFA PLGIRVEWND
301: LFWVVHPGSR GVLDHIDMAL RLEPKKLAAS RTVMGEYGNM LGATVIFVLD EQRRLMEKDE VGAHGWGVMV GFGPGFTVET MVLRALANDQ KGKY

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.