Factsheet for HORVU2Hr1G116390.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G110130.3
HORVU3Hr1G056560.2
HORVU5Hr1G112670.1
HORVU6Hr1G047380.1
HORVU6Hr1G048650.1
HORVU6Hr1G056710.2
HORVU6Hr1G080360.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13930.1	HORVU2Hr1G110130.3	AT3G51240.1	10536025
AT5G13930.1	HORVU5Hr1G112670.1	AT3G55120.1	10536025
AT5G13930.1	HORVU6Hr1G056710.2	AT5G08640.1	18467451
AT5G13930.1	HORVU6Hr1G080360.1	AT5G08640.1	18467451
AT5G13930.1	HORVU6Hr1G056710.2	AT5G08640.1	21669202
AT5G13930.1	HORVU6Hr1G080360.1	AT5G08640.1	21669202
AT5G13930.1	HORVU3Hr1G056560.2	AT5G42800.1	10536025
AT5G13930.1	HORVU6Hr1G047380.1	AT5G42800.1	10536025
AT5G13930.1	HORVU6Hr1G048650.1	AT5G42800.1	10536025
AT5G13930.1	HORVU3Hr1G056560.2	AT5G42800.1	21669202
AT5G13930.1	HORVU6Hr1G047380.1	AT5G42800.1	21669202
AT5G13930.1	HORVU6Hr1G048650.1	AT5G42800.1	21669202
AT5G13930.1	HORVU6Hr1G056710.2	AT5G63590.1	18467451
AT5G13930.1	HORVU6Hr1G080360.1	AT5G63590.1	18467451

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G558400.1	Wheat	cytosol	98.74	98.74
TraesCS2A01G527700.2	Wheat	cytosol	98.74	98.74
HORVU2Hr1G005220.3	Barley	cytosol	96.23	96.96
HORVU2Hr1G004170.4	Barley	plastid	96.98	89.15
GSMUA_Achr6P16370_001	Banana	cytosol, mitochondrion, plastid	68.59	87.22
GSMUA_Achr6P10910_001	Banana	cytosol, mitochondrion	70.35	85.37
KRH42776	Soybean	cytosol	54.52	85.1
VIT_14s0068g00930.t01	Wine grape	cytosol	83.67	84.73
VIT_14s0068g00920.t01	Wine grape	cytosol	83.17	84.22
Solyc09g091510.2.1	Tomato	cytosol, extracellular	82.16	84.06
PGSC0003DMT400076178	Potato	cytosol	81.91	83.8
Solyc05g053550.2.1	Tomato	cytosol, mitochondrion	81.66	83.55
KRH42775	Soybean	cytosol	81.41	83.51
KRH42783	Soybean	cytosol	81.41	83.51
KRH42758	Soybean	cytosol	81.41	83.51
GSMUA_Achr10P...	Banana	cytosol	67.84	83.33
VIT_05s0136g00260.t01	Wine grape	cytosol	81.41	83.29
KRH42759	Soybean	cytosol	81.16	83.25
KRH58872	Soybean	cytosol	81.16	83.25
PGSC0003DMT400049165	Potato	cytosol, mitochondrion	81.16	83.03
CDX78547	Canola	cytosol	82.16	82.99
KRH42757	Soybean	cytosol	80.9	82.99
KRH42780	Soybean	cytosol	80.9	82.99
KRH42778	Soybean	cytosol	80.9	82.99
CDX69618	Canola	cytosol	82.16	82.78
KRH75544	Soybean	cytosol	80.65	82.73
CDX91090	Canola	cytosol	82.16	82.58
CDX70528	Canola	cytosol	82.16	82.58
KRH42760	Soybean	cytosol	80.4	82.47
KRH37579	Soybean	cytosol	80.4	82.47
TraesCS2D01G530600.1	Wheat	cytosol, plastid	99.0	82.43
KRG94730	Soybean	cytosol	80.9	82.35
CDY09836	Canola	cytosol	81.66	82.28
Bra008792.1-P	Field mustard	cytosol	81.66	82.28
KRH71115	Soybean	cytosol	80.15	82.22
AT5G13930.1	Thale cress	cytosol	81.41	82.03
Bra006224.1-P	Field mustard	cytosol	81.41	81.82
Bra023441.1-P	Field mustard	cytosol	80.65	81.47
KRH77699	Soybean	endoplasmic reticulum	78.64	80.46
KRH27737	Soybean	cytosol	78.14	79.95
HORVU1Hr1G089540.1	Barley	mitochondrion	78.89	78.7
HORVU1Hr1G004830.1	Barley	cytosol	78.39	78.59
CDY51056	Canola	cytosol	77.39	78.17
Bra036307.1-P	Field mustard	cytosol	77.14	78.12
Bra020688.1-P	Field mustard	cytosol	76.88	77.67
CDY05664	Canola	cytosol	76.63	77.41
PGSC0003DMT400076179	Potato	cytosol	73.62	77.31
CDY07114	Canola	cytosol	76.38	74.15
GSMUA_Achr10P...	Banana	mitochondrion	63.32	73.47
CDY05666	Canola	mitochondrion	68.59	65.31
HORVU3Hr1G006040.1	Barley	cytosol	54.27	54.27
HORVU6Hr1G055000.1	Barley	cytosol, mitochondrion	51.76	52.02
HORVU4Hr1G003250.1	Barley	cytosol	52.26	49.64
HORVU6Hr1G074060.2	Barley	cytosol	49.25	48.64
HORVU2Hr1G003280.1	Barley	cytosol	47.99	48.11
HORVU7Hr1G009190.1	Barley	cytosol	45.48	46.89
HORVU1Hr1G064330.1	Barley	cytosol	46.48	46.84
HORVU7Hr1G024480.2	Barley	cytosol	45.73	46.19
HORVU2Hr1G002640.1	Barley	cytosol	43.97	44.42
HORVU6Hr1G003020.2	Barley	cytosol	45.48	43.83
HORVU5Hr1G093950.1	Barley	cytosol	42.71	42.18
HORVU7Hr1G020920.2	Barley	cytosol, peroxisome	44.47	38.15
HORVU5Hr1G000690.2	Barley	cytosol, peroxisome	37.44	32.6
HORVU1Hr1G042510.2	Barley	cytosol	36.18	29.63

Protein Annotations

KEGG:00941+2.3.1.74	Gene3D:3.40.47.10	MapMan:9.2.2.1.1.1	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_AS	InterPro:Chalcone/stilbene_synthase_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009813
GO:GO:0016210	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	EnsemblPlantsGene:HORVU2Hr1G116390	EnsemblPlants:HORVU2Hr1G116390.2
InterPro:IPR016039	UniProt:M0YXJ8	PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	ScanProsite:PS00441
PANTHER:PTHR11877	PANTHER:PTHR11877:SF44	InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901	InterPro:Thiolase-like	UniParc:UPI000295CCA9
SEG:seg	:	:	:	:	:

Description

Chalcone synthase 1 [Source:UniProtKB/TrEMBL;Acc:M0YXJ8]

Coordinates

chrchr2H:-:737966163..737969220

Molecular Weight (calculated)

43481.6 Da

IEP (calculated)

6.293

GRAVY (calculated)

-0.090

Length

398 amino acids

Sequence
(BLAST)

001: MAATMTVEEV RNAQRAEGPA TVLAIGTATP ANCVYQADYP DYYFKITKSD HMADLKEKFK RMCDKSQIRK RYMHLTEEIL EENPNMCAYM APSLDARQDI
101: VVVEVPKLGK AAAQKAIKEW GQPRSKITHL VFCTTSGVDM PGADYQLTKM LGLRPSVKRL MMYQQGCFAG GTVLRLAKDL AENNRGARVL VVCSEITAVT
201: FRGPHESHLD SLVGQALFGD GAAAVIIGAD PDLSVERPLF QLVSASQTIL PDSEGAIDGH LREVGLTFHL LKDVPGLISK NIERALEEAF KPLGIDDWNS
301: VFWIAHPGGP AILDMVEAKV NLNKERMRAT RHVLSEYGNM SSACVLFIMD EMRKRSAEDG HATTGEGMDW GVLFGFGPGL TVETVVLHSV PISAGATA

Best Arabidopsis Sequence Match ( AT5G13930.1 )
(BLAST)

001: MVMAGASSLD EIRQAQRADG PAGILAIGTA NPENHVLQAE YPDYYFRITN SEHMTDLKEK FKRMCDKSTI RKRHMHLTEE FLKENPHMCA YMAPSLDTRQ
101: DIVVVEVPKL GKEAAVKAIK EWGQPKSKIT HVVFCTTSGV DMPGADYQLT KLLGLRPSVK RLMMYQQGCF AGGTVLRIAK DLAENNRGAR VLVVCSEITA
201: VTFRGPSDTH LDSLVGQALF SDGAAALIVG SDPDTSVGEK PIFEMVSAAQ TILPDSDGAI DGHLREVGLT FHLLKDVPGL ISKNIVKSLD EAFKPLGISD
301: WNSLFWIAHP GGPAILDQVE IKLGLKEEKM RATRHVLSEY GNMSSACVLF ILDEMRRKSA KDGVATTGEG LEWGVLFGFG PGLTVETVVL HSVPL

Arabidopsis Description

CHSTT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UKS9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.