Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU6Hr1G056710.2 | |
| HORVU6Hr1G080360.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G51240.1 | HORVU6Hr1G056710.2 | AT5G08640.1 | 18467451 |
| AT3G51240.1 | HORVU6Hr1G080360.1 | AT5G08640.1 | 18467451 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G493500.1 | Wheat | golgi | 81.76 | 96.29 |
| TraesCS2D01G493400.1 | Wheat | golgi, nucleus | 81.76 | 96.03 |
| TraesCS2B01G521500.1 | Wheat | golgi | 81.53 | 95.77 |
| Zm00001d001960_P001 | Maize | plastid | 66.67 | 80.87 |
| EES13031 | Sorghum | cytosol | 67.57 | 80.21 |
| VIT_18s0001g14310.t01 | Wine grape | cytosol | 60.81 | 75.42 |
| AT3G51240.1 | Thale cress | cytosol | 59.91 | 74.3 |
| GSMUA_Achr2P02770_001 | Banana | cytosol | 61.94 | 73.92 |
| CDX77983 | Canola | cytosol | 59.23 | 73.46 |
| Solyc02g083860.2.1 | Tomato | cytosol | 59.68 | 73.2 |
| Bra036828.1-P | Field mustard | cytosol | 59.01 | 73.18 |
| PGSC0003DMT400009175 | Potato | cytosol | 59.23 | 73.06 |
| CDX73739 | Canola | cytosol | 58.78 | 72.91 |
| KXG27349 | Sorghum | plastid | 70.72 | 72.85 |
| VIT_04s0023g03370.t01 | Wine grape | cytosol | 59.46 | 72.73 |
| CDX90656 | Canola | cytosol | 56.98 | 72.29 |
| GSMUA_Achr7P16780_001 | Banana | cytosol | 60.59 | 72.12 |
| CDY29008 | Canola | cytosol | 55.86 | 70.86 |
| Bra012862.1-P | Field mustard | cytosol | 55.41 | 70.29 |
| KRH69784 | Soybean | cytosol | 58.33 | 69.07 |
| KRH69787 | Soybean | nucleus | 58.11 | 68.62 |
| KRH08080 | Soybean | cytosol | 57.21 | 68.28 |
| KRH76658 | Soybean | cytosol | 55.41 | 67.4 |
| CDX76765 | Canola | cytosol | 31.08 | 57.98 |
| Os04t0662600-00 | Rice | mitochondrion, peroxisome | 50.68 | 55.42 |
| CDX76159 | Canola | cytoskeleton, cytosol, peroxisome | 35.36 | 53.58 |
| Bra014831.1-P | Field mustard | cytosol | 38.74 | 53.42 |
| HORVU7Hr1G033360.11 | Barley | cytosol | 27.7 | 33.98 |
| HORVU4Hr1G084810.2 | Barley | cytosol, peroxisome, plastid | 25.68 | 33.93 |
| HORVU0Hr1G005300.1 | Barley | cytosol | 25.45 | 33.24 |
| HORVU2Hr1G093950.12 | Barley | peroxisome, plastid | 25.45 | 32.38 |
| HORVU7Hr1G025650.1 | Barley | cytosol | 24.77 | 31.7 |
| HORVU3Hr1G087570.4 | Barley | cytosol, peroxisome, plastid | 27.93 | 30.32 |
| HORVU1Hr1G015050.7 | Barley | cytosol, peroxisome | 24.77 | 30.3 |
| HORVU6Hr1G056710.2 | Barley | cytosol, peroxisome | 4.73 | 29.17 |
| HORVU2Hr1G117900.3 | Barley | cytosol, mitochondrion, peroxisome | 20.72 | 28.93 |
| HORVU4Hr1G056500.2 | Barley | cytosol, peroxisome, plastid | 24.1 | 28.84 |
| HORVU6Hr1G010980.1 | Barley | cytosol | 22.07 | 28.32 |
| Os08t0480200-01 | Rice | cytosol | 21.17 | 27.89 |
| HORVU2Hr1G108680.1 | Barley | cytosol | 12.61 | 27.86 |
| HORVU2Hr1G108800.1 | Barley | cytosol | 12.61 | 27.86 |
| HORVU4Hr1G081500.1 | Barley | cytosol, peroxisome | 13.51 | 27.65 |
| HORVU4Hr1G089480.1 | Barley | cytosol | 21.85 | 27.56 |
| HORVU2Hr1G117810.43 | Barley | cytosol, nucleus, peroxisome | 20.05 | 27.38 |
| HORVU4Hr1G081480.3 | Barley | plasma membrane | 20.95 | 27.19 |
| HORVU4Hr1G081550.2 | Barley | peroxisome, plastid | 17.34 | 27.11 |
| HORVU7Hr1G060070.9 | Barley | cytosol, peroxisome | 24.32 | 27.0 |
| HORVU6Hr1G080360.1 | Barley | plastid | 21.17 | 26.86 |
| HORVU7Hr1G122350.2 | Barley | cytosol, peroxisome, plastid | 20.27 | 26.63 |
| HORVU5Hr1G011540.3 | Barley | cytosol | 22.52 | 26.11 |
| HORVU4Hr1G081490.1 | Barley | cytosol, peroxisome | 20.95 | 25.98 |
| HORVU1Hr1G071670.2 | Barley | cytosol | 23.65 | 25.42 |
| HORVU5Hr1G048180.23 | Barley | cytosol, nucleus, peroxisome | 22.07 | 25.32 |
| HORVU4Hr1G000050.3 | Barley | plastid | 22.97 | 25.25 |
| HORVU5Hr1G094280.1 | Barley | cytosol, peroxisome | 21.4 | 24.61 |
| HORVU3Hr1G077080.2 | Barley | cytosol, peroxisome, plastid | 19.37 | 23.96 |
| HORVU4Hr1G089330.2 | Barley | plastid | 17.57 | 17.93 |
| Os08t0480100-01 | Rice | cytosol, endoplasmic reticulum, plastid | 0.45 | 0.32 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:9.2.2.4.3 | UniProt:A0A287JET4 | ncoils:Coil | InterPro:DIOX_N | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009813 |
| GO:GO:0016491 | GO:GO:0030246 | GO:GO:0031418 | GO:GO:0045486 | GO:GO:0046872 | GO:GO:0051213 |
| GO:GO:0055114 | EnsemblPlantsGene:HORVU2Hr1G110130 | EnsemblPlants:HORVU2Hr1G110130.3 | InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 |
| InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF137 |
| SUPFAM:SSF51197 | UniParc:UPI000B47A3BD | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:718986400..718988288
Molecular Weight (calculated)
49331.8 Da
IEP (calculated)
6.952
GRAVY (calculated)
-0.394
Length
444 amino acids
Sequence
(BLAST)
(BLAST)
001: MRARDLQVAS ALAFQRIHSA LSQYISACVQ RPGNHNPIDR ALQETSHHTR QTPAATQARV GSPACGSMAP VSNETFLPTE AWGEATLRPS FVRDEDERPK
101: VAHDRFSDAV PLISLHGIDG ARRAQIRDRV AAACEDWGIF QVIDHGVDAD LIADMTRLAR EFFALPAEDK LRYDMSGGKK GGFIVSSHLQ GEAVQDWREI
201: VTYFSYPVKA RDYGRWPEKP AGWRAVVERY SERLMGLSCN LMGVLSEAMG LETEALAKAC VDMDQKVVVN FYPRCPQPDL TLGLKRHTDP GTITLLLQDL
301: VGGLQATRDG GKNWITVQPI SGAFVVNLGD HGHFMSNGRF KNADHQAVVN GESSRLSIAT FQNPAPDARV WPLAVREGEE PILEEPITFT EMYRRKMERD
401: LDLAKRKKQA KDQLMQQQLQ LQQQQAVAAA PMPTATKPLN EILA
101: VAHDRFSDAV PLISLHGIDG ARRAQIRDRV AAACEDWGIF QVIDHGVDAD LIADMTRLAR EFFALPAEDK LRYDMSGGKK GGFIVSSHLQ GEAVQDWREI
201: VTYFSYPVKA RDYGRWPEKP AGWRAVVERY SERLMGLSCN LMGVLSEAMG LETEALAKAC VDMDQKVVVN FYPRCPQPDL TLGLKRHTDP GTITLLLQDL
301: VGGLQATRDG GKNWITVQPI SGAFVVNLGD HGHFMSNGRF KNADHQAVVN GESSRLSIAT FQNPAPDARV WPLAVREGEE PILEEPITFT EMYRRKMERD
401: LDLAKRKKQA KDQLMQQQLQ LQQQQAVAAA PMPTATKPLN EILA
001: MAPGTLTELA GESKLNSKFV RDEDERPKVA YNVFSDEIPV ISLAGIDDVD GKRGEICRQI VEACENWGIF QVVDHGVDTN LVADMTRLAR DFFALPPEDK
101: LRFDMSGGKK GGFIVSSHLQ GEAVQDWREI VTYFSYPVRN RDYSRWPDKP EGWVKVTEEY SERLMSLACK LLEVLSEAMG LEKESLTNAC VDMDQKIVVN
201: YYPKCPQPDL TLGLKRHTDP GTITLLLQDQ VGGLQATRDN GKTWITVQPV EGAFVVNLGD HGHFLSNGRF KNADHQAVVN SNSSRLSIAT FQNPAPDATV
301: YPLKVREGEK AILEEPITFA EMYKRKMGRD LELARLKKLA KEERDHKEVD KPVDQIFA
101: LRFDMSGGKK GGFIVSSHLQ GEAVQDWREI VTYFSYPVRN RDYSRWPDKP EGWVKVTEEY SERLMSLACK LLEVLSEAMG LEKESLTNAC VDMDQKIVVN
201: YYPKCPQPDL TLGLKRHTDP GTITLLLQDQ VGGLQATRDN GKTWITVQPV EGAFVVNLGD HGHFLSNGRF KNADHQAVVN SNSSRLSIAT FQNPAPDATV
301: YPLKVREGEK AILEEPITFA EMYKRKMGRD LELARLKKLA KEERDHKEVD KPVDQIFA
Arabidopsis Description
F3HNaringenin,2-oxoglutarate 3-dioxygenase [Source:UniProtKB/Swiss-Prot;Acc:Q9S818]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.