Factsheet for Bra014831.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra009358.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G51240.1	Bra009358.1-P	AT5G08640.1	18467451

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76159	Canola	cytoskeleton, cytosol, peroxisome	86.96	95.56
AT3G51240.1	Thale cress	cytosol	68.63	61.73
Bra036828.1-P	Field mustard	cytosol	67.7	60.89
Bra012862.1-P	Field mustard	cytosol	63.98	58.86
VIT_04s0023g03370.t01	Wine grape	cytosol	63.04	55.92
VIT_18s0001g14310.t01	Wine grape	cytosol	61.18	55.03
PGSC0003DMT400009175	Potato	cytosol	59.94	53.61
Solyc02g083860.2.1	Tomato	cytosol	60.25	53.59
KRH08080	Soybean	cytosol	59.94	51.88
GSMUA_Achr2P02770_001	Banana	cytosol	59.94	51.88
KRH69784	Soybean	cytosol	60.25	51.73
KRH69787	Soybean	nucleus	60.25	51.6
GSMUA_Achr7P16780_001	Banana	cytosol	59.01	50.94
TraesCS2B01G613300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	53.11	49.0
EES13031	Sorghum	cytosol	56.83	48.93
Zm00001d001960_P001	Maize	plastid	55.59	48.91
TraesCS2B01G521500.1	Wheat	golgi	55.28	47.09
TraesCS2A01G493500.1	Wheat	golgi	54.97	46.95
TraesCS2D01G493400.1	Wheat	golgi, nucleus	54.97	46.83
KXG27349	Sorghum	plastid	56.52	42.23
HORVU2Hr1G110130.3	Barley	mitochondrion	53.42	38.74
Os04t0662600-00	Rice	mitochondrion, peroxisome	43.48	34.48
Bra034168.1-P	Field mustard	cytosol	24.84	27.68
Bra029414.1-P	Field mustard	plastid	27.95	26.39
Bra000713.1-P	Field mustard	plastid	28.26	26.0
Bra037921.1-P	Field mustard	cytosol	28.26	25.93
Bra000712.1-P	Field mustard	cytosol, nucleus, peroxisome	27.95	25.64
Bra017132.1-P	Field mustard	plastid	27.64	25.14
Bra009358.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	26.09	25.0
Bra000045.1-P	Field mustard	plastid	27.33	24.93
Bra018076.1-P	Field mustard	cytosol	22.98	24.26
Bra005860.1-P	Field mustard	cytosol	27.95	24.19
Bra013652.1-P	Field mustard	cytosol	26.71	24.02
Bra038447.1-P	Field mustard	cytosol, nucleus, peroxisome	25.47	23.98
Bra028752.1-P	Field mustard	cytosol	27.64	23.92
Bra019350.1-P	Field mustard	cytosol	26.09	23.53
Bra029211.1-P	Field mustard	cytosol	22.36	23.23
Bra014716.1-P	Field mustard	cytosol	26.4	23.22
Bra038648.1-P	Field mustard	cytosol	20.81	22.56
Bra038647.1-P	Field mustard	cytosol	21.43	22.48
Bra014500.1-P	Field mustard	cytosol	24.84	22.41
Bra037747.1-P	Field mustard	cytosol	21.43	21.97
Bra034861.1-P	Field mustard	cytosol	27.33	21.73
Bra004867.1-P	Field mustard	cytosol	24.22	21.73
Bra009771.1-P	Field mustard	mitochondrion	27.95	21.53
Os08t0480200-01	Rice	cytosol	22.05	21.07
Bra017227.1-P	Field mustard	cytosol	23.29	20.44
Bra028696.1-P	Field mustard	cytosol	21.43	19.11
Bra009258.1-P	Field mustard	cytosol, nucleus, peroxisome	15.53	18.12
Bra029212.1-P	Field mustard	cytosol	22.98	17.54
Bra007204.1-P	Field mustard	cytosol	26.09	13.53
Os08t0480100-01	Rice	cytosol, endoplasmic reticulum, plastid	0.31	0.16

Protein Annotations

Gene3D:2.60.120.330	MapMan:9.2.2.4.3	EnsemblPlantsGene:Bra014831	EnsemblPlants:Bra014831.1	EnsemblPlants:Bra014831.1-P	InterPro:DIOX_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M4DEB0
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF137	SUPFAM:SSF51197	UniParc:UPI000254509D	:	:	:

Description

AT3G51240 (E=8e-114) F3H, TT6, F3'H | F3H (FLAVANONE 3-HYDROXYLASE); naringenin 3-dioxygenase

Coordinates

chrA04:+:3465802..3467168

Molecular Weight (calculated)

36054.4 Da

IEP (calculated)

5.438

GRAVY (calculated)

-0.203

Length

322 amino acids

Sequence
(BLAST)

001: MAPGISGEIA GESKLYDYEF SDEIPVISLS GIDDVGRKKE EICGQIVEAC EKWGMFQAVD HGVDTNLMVN MTRLARDFFA LTTEEKLRFH MSGGEGGFSI
101: SSHLQGEAMK DWREVVVYLT YPVSNRDYSH WADKPEGWLK VTAEYSERLM GLAYKVLAVL SEAMGKGTGL AMGLEKDALK NACVDMEQKI FVTYFPKRSK
201: PDLALGMRHT DNGIITLLLQ DQFSCLQVTR DNGKTWVRVP FVPGALVINL GDIGHYLSNG RFMTTDHQGV VDSNSSKLFI NTFLFLAPHD TVYPLKVRDG
301: EKAKIEEPIS YEAITMRKLK DL

Best Arabidopsis Sequence Match ( AT3G51240.1 )
(BLAST)

001: MAPGTLTELA GESKLNSKFV RDEDERPKVA YNVFSDEIPV ISLAGIDDVD GKRGEICRQI VEACENWGIF QVVDHGVDTN LVADMTRLAR DFFALPPEDK
101: LRFDMSGGKK GGFIVSSHLQ GEAVQDWREI VTYFSYPVRN RDYSRWPDKP EGWVKVTEEY SERLMSLACK LLEVLSEAMG LEKESLTNAC VDMDQKIVVN
201: YYPKCPQPDL TLGLKRHTDP GTITLLLQDQ VGGLQATRDN GKTWITVQPV EGAFVVNLGD HGHFLSNGRF KNADHQAVVN SNSSRLSIAT FQNPAPDATV
301: YPLKVREGEK AILEEPITFA EMYKRKMGRD LELARLKKLA KEERDHKEVD KPVDQIFA

Arabidopsis Description

F3HNaringenin,2-oxoglutarate 3-dioxygenase [Source:UniProtKB/Swiss-Prot;Acc:Q9S818]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.