Factsheet for Bra028752.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04960	Canola	cytosol	98.92	98.92
CDY14105	Canola	cytosol, nucleus, peroxisome	97.31	94.27
AT5G05600.1	Thale cress	cytosol	90.32	90.57
Bra005860.1-P	Field mustard	cytosol	88.71	88.71
Bra034168.1-P	Field mustard	cytosol	61.56	79.24
KRH14938	Soybean	cytosol	68.55	70.64
KRG97722	Soybean	cytosol	67.2	69.25
KRH31155	Soybean	cytosol	66.13	68.14
VIT_13s0067g01020.t01	Wine grape	cytosol	65.05	67.41
KRH73197	Soybean	cytosol	68.01	66.93
Solyc03g096050.2.1	Tomato	cytosol	62.63	65.27
PGSC0003DMT400031149	Potato	cytosol	62.1	64.89
Bra014716.1-P	Field mustard	cytosol	62.9	63.93
Bra034861.1-P	Field mustard	cytosol	69.09	63.46
GSMUA_Achr7P15540_001	Banana	cytosol	58.06	61.02
GSMUA_Achr6P15610_001	Banana	cytosol	56.45	59.66
TraesCS1B01G088600.1	Wheat	cytoskeleton, cytosol, peroxisome	55.38	57.54
TraesCS1A01G070200.1	Wheat	cytoskeleton, cytosol, peroxisome	55.11	57.26
TraesCS1D01G072700.1	Wheat	cytoskeleton, cytosol, peroxisome	55.11	57.26
EES18946	Sorghum	cytosol	55.65	56.56
Os01t0832600-01	Rice	cytosol	55.11	56.01
HORVU1Hr1G015050.7	Barley	cytosol, peroxisome	54.57	55.92
Bra000045.1-P	Field mustard	plastid	52.69	55.52
TraesCS3B01G383900.1	Wheat	cytosol	55.65	55.5
Bra017132.1-P	Field mustard	plastid	52.69	55.37
TraesCS3D01G345600.1	Wheat	cytosol	56.18	55.29
TraesCS3A01G351400.2	Wheat	cytosol	55.91	54.88
EES01705	Sorghum	cytosol	56.72	54.38
Os05t0127500-01	Rice	cytosol	53.76	54.35
Zm00001d042980_P002	Maize	cytosol	54.57	54.28
Zm00001d028744_P001	Maize	cytosol	54.57	53.99
TraesCS4A01G109200.1	Wheat	cytosol	53.23	53.8
TraesCS4B01G195000.1	Wheat	cytosol	52.96	53.53
HORVU4Hr1G056500.2	Barley	cytosol, peroxisome, plastid	52.96	53.1
TraesCS4D01G195700.1	Wheat	cytosol	52.42	52.99
Zm00001d035462_P001	Maize	cytosol	54.3	52.88
EER92419	Sorghum	cytosol	54.03	52.48
TraesCS4B01G328300.1	Wheat	cytosol	37.63	52.24
Os03t0289800-01	Rice	cytosol	54.3	52.2
HORVU3Hr1G087570.4	Barley	cytosol, peroxisome, plastid	54.84	49.88
Zm00001d047744_P001	Maize	mitochondrion	54.3	49.63
Zm00001d012456_P004	Maize	plastid	55.11	43.43
Bra038447.1-P	Field mustard	cytosol, nucleus, peroxisome	35.48	38.6
Bra009358.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	34.14	37.8
Bra018076.1-P	Field mustard	cytosol	30.11	36.72
Bra000713.1-P	Field mustard	plastid	34.41	36.57
Bra007204.1-P	Field mustard	cytosol	61.02	36.55
Bra029414.1-P	Field mustard	plastid	32.26	35.19
Bra029211.1-P	Field mustard	cytosol	28.76	34.52
Bra000712.1-P	Field mustard	cytosol, nucleus, peroxisome	32.53	34.47
Bra037921.1-P	Field mustard	cytosol	32.26	34.19
Bra038648.1-P	Field mustard	cytosol	26.88	33.67
Bra038647.1-P	Field mustard	cytosol	27.42	33.22
Bra013652.1-P	Field mustard	cytosol	31.72	32.96
Bra037747.1-P	Field mustard	cytosol	27.42	32.48
Bra019350.1-P	Field mustard	cytosol	30.91	32.21
Bra014500.1-P	Field mustard	cytosol	30.65	31.93
Bra017227.1-P	Field mustard	cytosol	30.91	31.34
Bra036828.1-P	Field mustard	cytosol	30.11	31.28
Bra012862.1-P	Field mustard	cytosol	29.3	31.14
Bra004867.1-P	Field mustard	cytosol	28.76	29.8
Bra028696.1-P	Field mustard	cytosol	28.76	29.64
Bra009771.1-P	Field mustard	mitochondrion	33.06	29.43
Bra009258.1-P	Field mustard	cytosol, nucleus, peroxisome	21.51	28.99
Bra014831.1-P	Field mustard	cytosol	23.92	27.64
Bra029212.1-P	Field mustard	cytosol	29.3	25.83

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	EnsemblPlantsGene:Bra028752	EnsemblPlants:Bra028752.1	EnsemblPlants:Bra028752.1-P	InterPro:DIOX_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M4EIY7
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF134	SUPFAM:SSF51197	UniParc:UPI0002543122	:	:	:

Description

AT5G05600 (E=3e-201) | oxidoreductase, 2OG-Fe(II) oxygenase family protein

Coordinates

chrA02:+:2226258..2228930

Molecular Weight (calculated)

42550.6 Da

IEP (calculated)

6.798

GRAVY (calculated)

-0.552

Length

372 amino acids

Sequence
(BLAST)

001: MNKNKKDVKI KTEKGSMMDE WPEPIVRVQS LAERNLSTLP ERYIKPASQR PTMTDDAPVA TNIPIIDLEG LFSEDGSSDD VIMAKISEAC REWGFFQVVN
101: HGVRPELMDA ARENWREFFH LPVNAKETYS NSPRTYEGYG SRLGVEKGAI LDWSDYYYLH HLPPHLKDFN KWPSSPPTIR EVIDEYGQEV VQLCERIMRV
201: LSSNLGLKED KFQEAFGGKN IGSCLRVNYY PKCPRPELAL GLSSHSDPGG MTILLPDDQV FGLQVRKDNT WITVKPHPHA FIVNIGDQIQ ILSNSTYKSV
301: EHRVIVNSER ERVSLAFFYN PKSDIPIQPL QELVSTHNPP LYPPMTFDQY RLFIRTQGPR GKSHVESHVS PR

Best Arabidopsis Sequence Match ( AT5G05600.1 )
(BLAST)

001: MNKNKIDVKI ETKKGSMDEW PEPIVRVQSL AESNLSSLPD RYIKPASLRP TTTEDAPTAT NIPIIDLEGL FSEEGLSDDV IMARISEACR GWGFFQVVNH
101: GVKPELMDAA RENWREFFHM PVNAKETYSN SPRTYEGYGS RLGVEKGASL DWSDYYFLHL LPHHLKDFNK WPSFPPTIRE VIDEYGEELV KLSGRIMRVL
201: STNLGLKEDK FQEAFGGENI GACLRVNYYP KCPRPELALG LSPHSDPGGM TILLPDDQVF GLQVRKDDTW ITVKPHPHAF IVNIGDQIQI LSNSTYKSVE
301: HRVIVNSDKE RVSLAFFYNP KSDIPIQPLQ ELVSTHNPPL YPPMTFDQYR LFIRTQGPQG KSHVESHISP R

Arabidopsis Description

Probable 2-oxoglutarate-dependent dioxygenase At5g05600 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFF6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.