Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES18946 | Sorghum | cytosol | 83.77 | 87.43 |
| TraesCS1D01G072700.1 | Wheat | cytoskeleton, cytosol, peroxisome | 75.39 | 80.45 |
| TraesCS1B01G088600.1 | Wheat | cytoskeleton, cytosol, peroxisome | 74.35 | 79.33 |
| TraesCS1A01G070200.1 | Wheat | cytoskeleton, cytosol, peroxisome | 74.35 | 79.33 |
| HORVU1Hr1G015050.7 | Barley | cytosol, peroxisome | 74.08 | 77.96 |
| Os05t0127500-01 | Rice | cytosol | 72.51 | 75.27 |
| GSMUA_Achr6P15610_001 | Banana | cytosol | 60.99 | 66.19 |
| GSMUA_Achr7P15540_001 | Banana | cytosol | 58.38 | 62.99 |
| PGSC0003DMT400049193 | Potato | cytosol, mitochondrion, peroxisome | 29.58 | 61.75 |
| KRH38051 | Soybean | cytosol, peroxisome | 30.89 | 60.82 |
| Zm00001d028744_P001 | Maize | cytosol | 59.42 | 60.37 |
| Bra034168.1-P | Field mustard | cytosol | 44.5 | 58.82 |
| PGSC0003DMT400031149 | Potato | cytosol | 54.45 | 58.43 |
| VIT_13s0067g01020.t01 | Wine grape | cytosol | 54.71 | 58.22 |
| KRH14938 | Soybean | cytosol | 54.19 | 57.34 |
| Solyc03g096050.2.1 | Tomato | cytosol | 53.4 | 57.14 |
| KRG97722 | Soybean | cytosol | 53.93 | 57.06 |
| KRH65721 | Soybean | cytosol | 54.71 | 56.03 |
| KRH31155 | Soybean | cytosol | 52.88 | 55.96 |
| Zm00001d042980_P002 | Maize | cytosol | 54.71 | 55.88 |
| Zm00001d047744_P001 | Maize | mitochondrion | 59.42 | 55.77 |
| Solyc10g076660.1.1 | Tomato | cytosol | 53.14 | 55.62 |
| VIT_08s0105g00380.t01 | Wine grape | cytosol | 52.09 | 55.59 |
| PGSC0003DMT400049192 | Potato | cytosol | 53.14 | 55.46 |
| KRH00254 | Soybean | plastid | 50.52 | 55.46 |
| KRH73197 | Soybean | cytosol | 54.45 | 55.03 |
| Bra028752.1-P | Field mustard | cytosol | 52.88 | 54.3 |
| CDY04960 | Canola | cytosol | 52.88 | 54.3 |
| AT2G38240.1 | Thale cress | plastid | 50.0 | 54.11 |
| Bra005860.1-P | Field mustard | cytosol | 52.36 | 53.76 |
| CDY11329 | Canola | cytosol | 52.36 | 53.76 |
| AT5G05600.1 | Thale cress | cytosol | 52.09 | 53.64 |
| CDY68873 | Canola | plastid | 49.48 | 53.54 |
| CDX93319 | Canola | plastid | 49.48 | 53.54 |
| KRH49391 | Soybean | cytosol | 53.4 | 53.4 |
| CDY18399 | Canola | plastid | 49.48 | 53.39 |
| Bra017132.1-P | Field mustard | plastid | 49.48 | 53.39 |
| CDY02966 | Canola | cytosol | 50.79 | 53.3 |
| CDX80966 | Canola | cytosol | 51.83 | 53.23 |
| Bra014716.1-P | Field mustard | cytosol | 50.79 | 53.01 |
| Bra000045.1-P | Field mustard | plastid | 48.95 | 52.97 |
| CDY07746 | Canola | plastid | 48.95 | 52.97 |
| CDX76068 | Canola | cytosol | 50.52 | 52.73 |
| AT3G55970.1 | Thale cress | cytosol | 50.0 | 52.62 |
| CDY14105 | Canola | cytosol, nucleus, peroxisome | 52.88 | 52.6 |
| CDY14476 | Canola | plastid | 48.43 | 52.41 |
| PGSC0003DMT400028828 | Potato | cytosol | 48.17 | 51.11 |
| Solyc10g085190.1.1 | Tomato | cytosol | 47.64 | 50.42 |
| Solyc10g076670.1.1 | Tomato | cytosol | 28.27 | 48.43 |
| AT3G11180.2 | Thale cress | cytosol | 50.26 | 47.64 |
| CDY08545 | Canola | cytosol | 50.0 | 47.16 |
| Bra034861.1-P | Field mustard | cytosol | 49.74 | 46.91 |
| CDY01001 | Canola | cytosol | 49.48 | 46.67 |
| Zm00001d012456_P004 | Maize | plastid | 56.81 | 45.97 |
| Zm00001d029744_P001 | Maize | cytosol | 35.34 | 40.18 |
| CDX72185 | Canola | nucleus | 48.69 | 36.9 |
| Zm00001d045233_P002 | Maize | plastid | 36.65 | 35.99 |
| Zm00001d018181_P001 | Maize | endoplasmic reticulum, nucleus | 29.06 | 35.24 |
| Zm00001d018184_P001 | Maize | endoplasmic reticulum | 29.06 | 35.24 |
| Zm00001d002564_P001 | Maize | cytosol, peroxisome, plastid | 31.94 | 34.76 |
| Zm00001d027423_P002 | Maize | cytosol, nucleus, peroxisome | 33.25 | 34.42 |
| Zm00001d001960_P001 | Maize | plastid | 31.41 | 32.79 |
| Zm00001d014914_P001 | Maize | cytosol | 33.77 | 32.66 |
| Zm00001d048800_P001 | Maize | cytosol | 15.71 | 30.61 |
| Bra007204.1-P | Field mustard | cytosol | 48.95 | 30.11 |
| Zm00001d035308_P001 | Maize | extracellular | 26.96 | 30.03 |
| CDY27251 | Canola | nucleus | 48.43 | 29.79 |
| Zm00001d051896_P001 | Maize | cytosol | 27.23 | 29.71 |
| Zm00001d020163_P001 | Maize | cytosol | 20.68 | 29.59 |
| Zm00001d038073_P001 | Maize | cytosol | 16.49 | 29.03 |
| Zm00001d049926_P001 | Maize | cytosol | 29.58 | 28.04 |
| Zm00001d001927_P001 | Maize | cytosol | 23.82 | 27.83 |
| Zm00001d041726_P001 | Maize | plastid | 24.87 | 27.46 |
| Zm00001d031926_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 31.15 | 27.05 |
| Zm00001d052999_P001 | Maize | cytosol | 30.37 | 26.19 |
| Zm00001d001924_P001 | Maize | plastid | 23.3 | 24.59 |
| Zm00001d042655_P001 | Maize | cytosol | 0.26 | 0.88 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:50.1.13 | UniProt:A0A1D6LGG5 | ProteinID:AQK79009.1 | InterPro:DIOX_N | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 |
| GO:GO:0055114 | InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 |
| PFAM:PF14226 | PRINTS:PR00682 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF92 | SUPFAM:SSF51197 |
| UniParc:UPI000843BBF6 | EnsemblPlantsGene:Zm00001d035462 | EnsemblPlants:Zm00001d035462_P001 | EnsemblPlants:Zm00001d035462_T001 | SEG:seg | : |
Description
jasmonate-regulated gene 21
Coordinates
chr6:+:27973065..27977307
Molecular Weight (calculated)
41734.6 Da
IEP (calculated)
7.429
GRAVY (calculated)
-0.330
Length
382 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGAAAGWPE PVVRVQSLSE SGAATIPARY VKPEAERPAS AAGEEEGGGG IPVVDLSSPA TARAVSEACR DWGFFQAVNH GVPGELLRRA RGAWRGFFRQ
101: PMEVKQRYAN SPATYEGYGS RLGVEAGALL DWGDYYFLHV RPPHLCDPRK WPHLPPGLRR IGSSEELMYL RAYGRKTTEE YSREVAALCG RLLAAMSAGL
201: GVGEARLREA FGGAEGAGVC VRVNYYPRCP QPELALGLSS HSDPGGMTVL LADDRVRGLQ VRRRGAWVTV DPVPDAFIVN VGDQIQVLTN ATYRSVEHRV
301: VVNAADERLS VALFYNPRSD LPLAPMPELV SPDRPALYCP MTFDDYRMYI RRKGPRGKSQ VDSLKVADAV DADADADGRR CY
101: PMEVKQRYAN SPATYEGYGS RLGVEAGALL DWGDYYFLHV RPPHLCDPRK WPHLPPGLRR IGSSEELMYL RAYGRKTTEE YSREVAALCG RLLAAMSAGL
201: GVGEARLREA FGGAEGAGVC VRVNYYPRCP QPELALGLSS HSDPGGMTVL LADDRVRGLQ VRRRGAWVTV DPVPDAFIVN VGDQIQVLTN ATYRSVEHRV
301: VVNAADERLS VALFYNPRSD LPLAPMPELV SPDRPALYCP MTFDDYRMYI RRKGPRGKSQ VDSLKVADAV DADADADGRR CY
001: MNKNKIDVKI ETKKGSMDEW PEPIVRVQSL AESNLSSLPD RYIKPASLRP TTTEDAPTAT NIPIIDLEGL FSEEGLSDDV IMARISEACR GWGFFQVVNH
101: GVKPELMDAA RENWREFFHM PVNAKETYSN SPRTYEGYGS RLGVEKGASL DWSDYYFLHL LPHHLKDFNK WPSFPPTIRE VIDEYGEELV KLSGRIMRVL
201: STNLGLKEDK FQEAFGGENI GACLRVNYYP KCPRPELALG LSPHSDPGGM TILLPDDQVF GLQVRKDDTW ITVKPHPHAF IVNIGDQIQI LSNSTYKSVE
301: HRVIVNSDKE RVSLAFFYNP KSDIPIQPLQ ELVSTHNPPL YPPMTFDQYR LFIRTQGPQG KSHVESHISP R
101: GVKPELMDAA RENWREFFHM PVNAKETYSN SPRTYEGYGS RLGVEKGASL DWSDYYFLHL LPHHLKDFNK WPSFPPTIRE VIDEYGEELV KLSGRIMRVL
201: STNLGLKEDK FQEAFGGENI GACLRVNYYP KCPRPELALG LSPHSDPGGM TILLPDDQVF GLQVRKDDTW ITVKPHPHAF IVNIGDQIQI LSNSTYKSVE
301: HRVIVNSDKE RVSLAFFYNP KSDIPIQPLQ ELVSTHNPPL YPPMTFDQYR LFIRTQGPQG KSHVESHISP R
Arabidopsis Description
Probable 2-oxoglutarate-dependent dioxygenase At5g05600 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFF6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.