Factsheet for Zm00001d049926_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, secretory
MultiLoc:	peroxisome
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES15170	Sorghum	cytosol	86.6	84.71
Zm00001d031926_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	88.59	81.14
TraesCS7D01G279500.1	Wheat	cytosol	67.49	71.2
HORVU7Hr1G060070.9	Barley	cytosol, peroxisome	67.0	67.5
TraesCS7B01G180300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	67.25	67.08
TraesCS7A01G280900.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	67.74	66.91
Os08t0560000-01	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	66.25	65.76
Zm00001d052999_P001	Maize	cytosol	63.28	57.56
GSMUA_Achr9P23620_001	Banana	cytosol	52.36	55.82
VIT_00s0250g00090.t01	Wine grape	cytosol	50.12	54.01
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	50.87	53.81
AT2G36690.1	Thale cress	cytosol, nucleus, peroxisome	48.64	53.55
CDX75020	Canola	cytosol	48.39	52.99
Bra017227.1-P	Field mustard	cytosol	48.14	52.86
KRH67790	Soybean	cytosol	47.15	51.91
PGSC0003DMT400070302	Potato	cytosol	47.39	51.76
Solyc11g007890.1.1	Tomato	cytosol	47.89	51.6
KRG96078	Soybean	cytosol	47.64	51.2
VIT_08s0007g04540.t01	Wine grape	cytosol	47.89	51.19
GSMUA_Achr4P04450_001	Banana	cytosol, mitochondrion	40.94	50.77
PGSC0003DMT400009900	Potato	cytosol	47.64	50.26
Solyc09g008560.2.1	Tomato	cytosol	46.9	50.0
KRH32602	Soybean	cytosol	46.9	49.48
KRH19976	Soybean	cytosol	46.15	48.82
KRH07794	Soybean	cytosol	36.97	47.3
Zm00001d029744_P001	Maize	cytosol	31.27	37.5
Zm00001d002564_P001	Maize	cytosol, peroxisome, plastid	32.26	37.04
Zm00001d027423_P002	Maize	cytosol, nucleus, peroxisome	33.5	36.59
Zm00001d001927_P001	Maize	cytosol	28.29	34.86
Zm00001d001924_P001	Maize	plastid	30.52	33.98
Zm00001d035308_P001	Maize	extracellular	28.78	33.82
Zm00001d042980_P002	Maize	cytosol	30.02	32.35
Zm00001d051896_P001	Maize	cytosol	27.79	32.0
Zm00001d018181_P001	Maize	endoplasmic reticulum, nucleus	24.81	31.75
Zm00001d018184_P001	Maize	endoplasmic reticulum	24.81	31.75
Zm00001d028744_P001	Maize	cytosol	29.28	31.38
Zm00001d041726_P001	Maize	plastid	26.8	31.21
Zm00001d001960_P001	Maize	plastid	27.79	30.6
Zm00001d038073_P001	Maize	cytosol	16.13	29.95
Zm00001d020163_P001	Maize	cytosol	19.6	29.59
Zm00001d035462_P001	Maize	cytosol	28.04	29.58
Zm00001d048800_P001	Maize	cytosol	14.14	29.08
Zm00001d047744_P001	Maize	mitochondrion	29.28	28.99
Zm00001d045233_P002	Maize	plastid	25.31	26.22
Zm00001d014914_P001	Maize	cytosol	25.06	25.57
Zm00001d012456_P004	Maize	plastid	29.78	25.42
Zm00001d042655_P001	Maize	cytosol	0.74	2.65

Protein Annotations

EntrezGene:100283148	MapMan:11.6.3.3	Gene3D:2.60.120.330	ProteinID:AQK51586.1	UniProt:B6TF29	InterPro:DIOX_N
EMBL:EU963594	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF152
SUPFAM:SSF51197	UniParc:UPI000182DD88	EnsemblPlantsGene:Zm00001d049926	EnsemblPlants:Zm00001d049926_P001	EnsemblPlants:Zm00001d049926_T001	SEG:seg

Description

Gibberellin 20 oxidase 2

Coordinates

chr4:-:53429242..53431331

Molecular Weight (calculated)

43721.2 Da

IEP (calculated)

6.444

GRAVY (calculated)

-0.081

Length

403 amino acids

Sequence
(BLAST)

001: MSLVAAPMAI VDVANAQLQQ AAAAAAKKDE DGHEQQESSY DYGALMKGVR HLSDSGITRL PDRYVLPASD RPGVLAVSSS VAGSGRVKLP VVNLAGLRDP
101: CQRAAVLATL DAACREYGFF QVVNHGFGSD VSGGMLDVAQ RFFELPLAER ARHMSADVRA PVRYGTSFNQ AKDDVLCWRD FLKLVCQPLQ AVLPYWPQQP
201: ADLRDVATRY ATASHRLFME VMEAALEALG IPTAGGVLGE LAASSSHMMT VNCYPACPQP ELTLGMPSHS DYGLFTFVLQ DHVEGLQVMH DGRWLTIDPI
301: PGSFVVNVGD HLEIYSNGRY KSALHRVHVN STRPRISVAS FHSLPAERVI GPAPELVDDE AGNPRRYMDT DFATFLAYLA SADGKNKTFL QSRKLPAAAP
401: PCL

Best Arabidopsis Sequence Match ( AT2G36690.2 )
(BLAST)

001: MSPSMIAPVM EEENKKYQKG VKHLCENGLT KVPTKYIWPE PDRPILTKSD KLIKPNKNLK LPLIDFAELL GPNRPHVLRT IAEACKTYGF FQVVNHGMEG
101: DVSKNMIDVC KRFFELPYEE RSKYMSSDMS APVRYGTSFN QIKDNVFCWR DFLKLYAHPL PDYLPHWPSS PSDFRSSAAT YAKETKEMFE MMVKAILESL
201: EIDGSDEAAK ELEEGSQVVV VNCYPPCPEP ELTLGMPPHS DYGFLTLLLQ DEVEGLQILY RDEWVTVDPI PGSFVVNVGD HLEIFSNGRY KSVLHRVLVN
301: STKPRISVAS LHSFPLTSVV KPSPKLVDKH NPSQYMDTDF TTFLQYITSR EPKWKNFLES RKIHHV

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4INZ9]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.