Factsheet for GSMUA_AchrUn_randomP07550_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P23620_001	Banana	cytosol	63.78	64.29
GSMUA_Achr4P04450_001	Banana	cytosol, mitochondrion	52.76	61.85
Solyc11g007890.1.1	Tomato	cytosol	59.58	60.7
VIT_08s0007g04540.t01	Wine grape	cytosol	59.84	60.48
VIT_00s0250g00090.t01	Wine grape	cytosol	59.32	60.43
PGSC0003DMT400070302	Potato	cytosol	58.27	60.16
AT2G36690.1	Thale cress	cytosol, nucleus, peroxisome	56.69	59.02
CDX75020	Canola	cytosol	56.17	58.15
KRH67790	Soybean	cytosol	54.86	57.1
Bra017227.1-P	Field mustard	cytosol	54.86	56.95
KRG96078	Soybean	cytosol	54.59	55.47
Solyc09g008560.2.1	Tomato	cytosol	54.33	54.76
PGSC0003DMT400009900	Potato	cytosol	54.86	54.71
KRH32602	Soybean	cytosol	53.28	53.14
KRH07794	Soybean	cytosol	43.57	52.7
KRH19976	Soybean	cytosol	52.49	52.49
TraesCS4A01G311000.1	Wheat	cytosol	50.66	52.16
TraesCS7D01G279500.1	Wheat	cytosol	51.44	51.31
EER96378	Sorghum	cytosol	52.76	51.02
Zm00001d049926_P001	Maize	cytosol	53.81	50.87
EES15170	Sorghum	cytosol	54.59	50.49
TraesCS4B01G003300.1	Wheat	plastid	50.39	49.61
TraesCS4D01G002800.1	Wheat	cytosol, plastid	50.66	49.36
Os08t0560000-01	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	52.23	49.01
Os09t0570800-01	Rice	cytosol	48.03	48.93
TraesCS7A01G280900.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	51.71	48.28
TraesCS7B01G180300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	51.18	48.27
HORVU7Hr1G060070.9	Barley	cytosol, peroxisome	50.66	48.25
EES08336	Sorghum	cytosol	49.61	47.73
HORVU4Hr1G000050.3	Barley	plastid	50.39	47.52
Zm00001d031926_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	54.07	46.82
Zm00001d052999_P001	Maize	cytosol	48.82	41.99
GSMUA_Achr1P03620_001	Banana	cytosol, nucleus, peroxisome	33.33	37.69
GSMUA_Achr8P12320_001	Banana	cytosol, nucleus, peroxisome	33.07	36.95
GSMUA_Achr2P10240_001	Banana	cytosol, nucleus, peroxisome	32.81	36.87
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome	33.6	36.26
GSMUA_Achr4P30130_001	Banana	cytosol, nucleus, peroxisome	31.76	35.91
GSMUA_Achr5P10230_001	Banana	cytosol, nucleus, peroxisome	31.76	35.91
GSMUA_Achr1P00770_001	Banana	cytosol	31.23	35.31
GSMUA_Achr10P...	Banana	cytosol	32.55	35.23
GSMUA_Achr11P...	Banana	cytosol	30.45	35.05
GSMUA_Achr5P12830_001	Banana	cytosol	30.71	34.51
GSMUA_Achr6P32920_001	Banana	cytosol	29.66	34.45
GSMUA_Achr10P...	Banana	cytosol	28.08	34.19
GSMUA_Achr5P08490_001	Banana	cytosol	31.23	33.33
GSMUA_Achr3P07030_001	Banana	cytosol	29.13	33.33
GSMUA_Achr9P15020_001	Banana	cytosol	30.71	33.33
GSMUA_Achr10P...	Banana	cytosol	29.13	33.13
GSMUA_Achr9P04430_001	Banana	cytosol	28.87	33.03
GSMUA_Achr7P15540_001	Banana	cytosol	30.45	32.77
GSMUA_Achr8P23330_001	Banana	cytosol	28.61	32.73
GSMUA_Achr5P29330_001	Banana	cytosol	30.45	32.68
GSMUA_Achr6P15610_001	Banana	cytosol	29.66	32.1
GSMUA_AchrUn_...	Banana	mitochondrion, plastid	31.5	30.77
GSMUA_Achr2P19210_001	Banana	cytosol	28.08	30.66
GSMUA_Achr5P04080_001	Banana	cytosol, peroxisome, plastid	27.03	28.61
GSMUA_Achr2P02770_001	Banana	cytosol	27.82	28.49
GSMUA_Achr7P16780_001	Banana	cytosol	27.03	27.61

Protein Annotations

MapMan:11.6.3.3	Gene3D:2.60.120.330	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_AchrUn_randomG07550_001
EnsemblPlants:GSMUA_AchrUn_randomP07550_001	EnsemblPlants:GSMUA_AchrUn_randomT07550_001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0U766
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF152
SUPFAM:SSF51197	UniParc:UPI000295CCE7	SEG:seg	:	:	:

Description

Putative Protein SRG1 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG07550_001]

Coordinates

chrchrUn_random:+:32441038..32449009

Molecular Weight (calculated)

43165.8 Da

IEP (calculated)

6.946

GRAVY (calculated)

-0.287

Length

381 amino acids

Sequence
(BLAST)

001: MDVVVGAGGR EEETADENYV KGVRHLCESG ISRVPAKYIL PVPDRPQVAP HERKDNTGSN LRLPVIDVAR LRTPDRGRVL ECLDRACREY GFFQVVNHGM
101: SSEALRRIMD VGRRFFGLPL EERSKYMTSD IRGPVRYGTS YNQIQDSVFC WRDFLKLSCH PLEEVLPFWP SAPMDLRDEA VSYAKQIKSL FCDIMAAVLE
201: ILGVNSGYLE EFDDGTHLVV INYYPPCPEP DLTLGMPPHS DYGFLTLLLQ DHIKGLQVQL RGKWITVEPI PNSFVVNIGD HLEIFSNGRY KSVLHRVVVN
301: STKPRMSIAS LHSLPFASVV SPSPELVDRE NPRLYKDTDF AAFLDYISSH EPKRKSFLES RKLPPHEVRS KIIYVSASSS S

Best Arabidopsis Sequence Match ( AT2G36690.2 )
(BLAST)

001: MSPSMIAPVM EEENKKYQKG VKHLCENGLT KVPTKYIWPE PDRPILTKSD KLIKPNKNLK LPLIDFAELL GPNRPHVLRT IAEACKTYGF FQVVNHGMEG
101: DVSKNMIDVC KRFFELPYEE RSKYMSSDMS APVRYGTSFN QIKDNVFCWR DFLKLYAHPL PDYLPHWPSS PSDFRSSAAT YAKETKEMFE MMVKAILESL
201: EIDGSDEAAK ELEEGSQVVV VNCYPPCPEP ELTLGMPPHS DYGFLTLLLQ DEVEGLQILY RDEWVTVDPI PGSFVVNVGD HLEIFSNGRY KSVLHRVLVN
301: STKPRISVAS LHSFPLTSVV KPSPKLVDKH NPSQYMDTDF TTFLQYITSR EPKWKNFLES RKIHHV

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4INZ9]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.