Factsheet for TraesCS4D01G002800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
peroxisome 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G311000.1	Wheat	cytosol	89.26	94.32
TraesCS4B01G003300.1	Wheat	plastid	92.58	93.54
HORVU4Hr1G000050.3	Barley	plastid	85.17	82.43
EER96378	Sorghum	cytosol	65.47	64.97
TraesCS7D01G279500.1	Wheat	cytosol	59.85	61.26
Os09t0570800-01	Rice	cytosol	57.29	59.89
AT2G36690.1	Thale cress	cytosol, nucleus, peroxisome	48.85	52.19
GSMUA_Achr9P23620_001	Banana	cytosol	50.13	51.85
PGSC0003DMT400070302	Potato	cytosol	48.34	51.22
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	49.36	50.66
Solyc11g007890.1.1	Tomato	cytosol	48.08	50.27
VIT_08s0007g04540.t01	Wine grape	cytosol	48.08	49.87
Bra017227.1-P	Field mustard	cytosol	46.55	49.59
KRH32602	Soybean	cytosol	48.34	49.48
KRH67790	Soybean	cytosol	46.29	49.45
VIT_00s0250g00090.t01	Wine grape	cytosol	47.06	49.2
CDX75020	Canola	cytosol	46.29	49.18
KRH19976	Soybean	cytosol	47.83	49.08
KRG96078	Soybean	cytosol	46.8	48.8
Solyc09g008560.2.1	Tomato	cytosol	47.06	48.68
PGSC0003DMT400009900	Potato	cytosol	47.31	48.43
GSMUA_Achr4P04450_001	Banana	cytosol, mitochondrion	39.64	47.69
KRH07794	Soybean	cytosol	37.08	46.03
TraesCS2D01G487400.1	Wheat	cytosol, nucleus, peroxisome	18.67	39.04
TraesCS2D01G539400.1	Wheat	cytosol, nucleus, peroxisome	31.71	37.8
TraesCS4D01G341800.1	Wheat	cytosol	31.97	37.2
TraesCS2D01G392800.1	Wheat	cytosol	31.46	36.18
TraesCS2D01G539600.1	Wheat	mitochondrion, plastid	30.69	35.29
TraesCS7D01G160100.2	Wheat	plastid	29.41	34.53
TraesCS3D01G437500.2	Wheat	cytosol	29.92	33.62
TraesCS5D01G159800.1	Wheat	plastid	30.95	33.06
TraesCS5D01G058700.2	Wheat	cytosol	31.46	32.63
TraesCS1D01G072700.1	Wheat	cytoskeleton, cytosol, peroxisome	29.67	32.4
TraesCS6D01G270600.1	Wheat	plastid	28.13	32.35
TraesCS6D01G270500.1	Wheat	plastid	28.13	32.07
TraesCS3D01G345600.1	Wheat	cytosol	30.95	32.01
TraesCS7D01G119600.1	Wheat	plastid	28.13	31.98
TraesCS4D01G339800.1	Wheat	cytosol, plastid	27.37	31.85
TraesCS2D01G392900.1	Wheat	plastid	31.71	31.79
TraesCS4D01G195700.1	Wheat	cytosol	29.92	31.79
TraesCS6D01G310700.1	Wheat	plastid	27.11	31.74
TraesCS3D01G405500.1	Wheat	cytosol	28.13	31.52
TraesCS6D01G035200.1	Wheat	cytosol	27.88	31.32
TraesCS6D01G270700.1	Wheat	cytosol, peroxisome, plastid	27.11	31.18
TraesCS6D01G038500.1	Wheat	plastid	27.37	30.92
TraesCS6D01G038900.1	Wheat	cytosol	24.04	29.28
TraesCS2D01G493400.1	Wheat	golgi, nucleus	26.34	27.25
TraesCS3D01G411700.1	Wheat	cytosol	19.95	25.83
TraesCS3D01G316200.1	Wheat	cytosol	25.58	24.81
TraesCS6D01G004300.1	Wheat	cytosol	24.04	21.46
TraesCS6D01G000600.1	Wheat	mitochondrion	13.81	21.18

Protein Annotations

EnsemblPlants:TraesCS4D01G002800.1	EnsemblPlantsGene:TraesCS4D01G002800	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF207	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SEG:seg	SUPFAM:SSF51197	MapMan:11.6.3.3	:	:

Description

No Description!

Coordinates

chr4D:-:1348723..1352624

Molecular Weight (calculated)

42980.2 Da

IEP (calculated)

5.599

GRAVY (calculated)

-0.289

Length

391 amino acids

Sequence
(BLAST)

001: MAILPAATES SSSHAGHSQQ QQLEPTTCNA PASSSSSESK QAPQEEEPNK GVRHLCERGV TSLPPRYVLP PSDRPAPAAP RGIPVIDMAR LRSTVPSERA
101: AELARLDAAC RDLGFFQAVN HGAGDKAKAM LDVAARFFAL PFEERARHMS PDIRAPVRYG TSFNQLNDGV LCWRDFLKLL CNPARLDDVL PSWPHNPSDL
201: REVMSAYARA NQGLFRELIE AALEAMGITG EGVLEELDGG TQMMMVNCFP VCPEPDLTLG MPPHSDYGFL TLLLQDQVNG LEVCQGDDDW LLVDPLPGAL
301: IVNVGDHLEI FSNGRYKSVL HRVRVNSTQL RISVASLHSL PPERVIRPAP ELLADGTQRR YMDTDLTTFL DYLASAEGKH KTFLQSRRIP T

Best Arabidopsis Sequence Match ( AT2G36690.2 )
(BLAST)

001: MSPSMIAPVM EEENKKYQKG VKHLCENGLT KVPTKYIWPE PDRPILTKSD KLIKPNKNLK LPLIDFAELL GPNRPHVLRT IAEACKTYGF FQVVNHGMEG
101: DVSKNMIDVC KRFFELPYEE RSKYMSSDMS APVRYGTSFN QIKDNVFCWR DFLKLYAHPL PDYLPHWPSS PSDFRSSAAT YAKETKEMFE MMVKAILESL
201: EIDGSDEAAK ELEEGSQVVV VNCYPPCPEP ELTLGMPPHS DYGFLTLLLQ DEVEGLQILY RDEWVTVDPI PGSFVVNVGD HLEIFSNGRY KSVLHRVLVN
301: STKPRISVAS LHSFPLTSVV KPSPKLVDKH NPSQYMDTDF TTFLQYITSR EPKWKNFLES RKIHHV

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4INZ9]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.