Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- peroxisome 1
- mitochondrion 1
- nucleus 1
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
HORVU2Hr1G108680.1 | Barley | cytosol | 90.91 | 84.58 |
HORVU2Hr1G108800.1 | Barley | cytosol | 90.91 | 84.58 |
TraesCS2A01G487100.1 | Wheat | cytosol | 93.58 | 63.41 |
TraesCS2B01G514200.1 | Wheat | cytosol, nucleus, peroxisome | 89.84 | 51.38 |
TraesCS2D01G539400.1 | Wheat | cytosol, nucleus, peroxisome | 74.87 | 42.68 |
OQU82532 | Sorghum | cytosol | 69.52 | 40.5 |
Zm00001d001927_P001 | Maize | cytosol | 70.59 | 40.37 |
Os04t0667200-01 | Rice | cytosol | 69.52 | 39.88 |
VIT_16s0013g00730.t01 | Wine grape | cytosol | 38.5 | 36.0 |
TraesCS2D01G539600.1 | Wheat | mitochondrion, plastid | 48.66 | 26.76 |
VIT_16s0013g00740.t01 | Wine grape | cytosol, nucleus, peroxisome, plastid | 50.27 | 26.48 |
Bra009258.1-P | Field mustard | cytosol, nucleus, peroxisome | 39.04 | 26.45 |
AT5G07480.1 | Thale cress | cytosol | 48.66 | 25.56 |
CDY65238 | Canola | cytosol, nucleus, peroxisome | 46.52 | 24.1 |
Bra028696.1-P | Field mustard | cytosol | 45.99 | 23.82 |
CDX70044 | Canola | cytosol, nucleus, peroxisome | 45.99 | 23.82 |
TraesCS7D01G279500.1 | Wheat | cytosol | 39.04 | 19.11 |
TraesCS4D01G002800.1 | Wheat | cytosol, plastid | 39.04 | 18.67 |
TraesCS4D01G339800.1 | Wheat | cytosol, plastid | 32.62 | 18.15 |
TraesCS7D01G160100.2 | Wheat | plastid | 32.09 | 18.02 |
TraesCS4D01G341800.1 | Wheat | cytosol | 32.09 | 17.86 |
TraesCS6D01G038900.1 | Wheat | cytosol | 30.48 | 17.76 |
TraesCS2D01G392800.1 | Wheat | cytosol | 31.55 | 17.35 |
TraesCS6D01G270600.1 | Wheat | plastid | 31.55 | 17.35 |
TraesCS6D01G035200.1 | Wheat | cytosol | 32.09 | 17.24 |
TraesCS6D01G038500.1 | Wheat | plastid | 31.55 | 17.05 |
TraesCS3D01G405500.1 | Wheat | cytosol | 31.55 | 16.91 |
TraesCS6D01G310700.1 | Wheat | plastid | 29.95 | 16.77 |
TraesCS6D01G270700.1 | Wheat | cytosol, peroxisome, plastid | 30.48 | 16.76 |
TraesCS1D01G072700.1 | Wheat | cytoskeleton, cytosol, peroxisome | 32.09 | 16.76 |
TraesCS7D01G119600.1 | Wheat | plastid | 30.48 | 16.57 |
TraesCS6D01G270500.1 | Wheat | plastid | 29.41 | 16.04 |
TraesCS3D01G345600.1 | Wheat | cytosol | 32.09 | 15.87 |
TraesCS5D01G159800.1 | Wheat | plastid | 31.02 | 15.85 |
TraesCS3D01G437500.2 | Wheat | cytosol | 28.88 | 15.52 |
TraesCS2D01G392900.1 | Wheat | plastid | 31.02 | 14.87 |
TraesCS4D01G195700.1 | Wheat | cytosol | 28.88 | 14.67 |
TraesCS5D01G058700.2 | Wheat | cytosol | 28.88 | 14.32 |
TraesCS2D01G493400.1 | Wheat | golgi, nucleus | 27.81 | 13.76 |
TraesCS3D01G316200.1 | Wheat | cytosol | 29.41 | 13.65 |
TraesCS3D01G411700.1 | Wheat | cytosol | 19.79 | 12.25 |
TraesCS6D01G004300.1 | Wheat | cytosol | 24.6 | 10.5 |
TraesCS6D01G000600.1 | Wheat | mitochondrion | 10.16 | 7.45 |
Protein Annotations
EnsemblPlants:TraesCS2D01G487400.1 | EnsemblPlantsGene:TraesCS2D01G487400 | Gene3D:2.60.120.330 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 |
InterPro:Oxoglu/Fe-dep_dioxygenase | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF201 | PFAM:PF03171 | PFscan:PS51471 | SUPFAM:SSF51197 |
MapMan:50.1.13 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2D:-:587165842..587168153
Molecular Weight (calculated)
20914.0 Da
IEP (calculated)
6.280
GRAVY (calculated)
-0.293
Length
187 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKFSAGVRR VALELMEAIL EGLGLGKHYQ HEEFENGLQL LQVNCYPKEP EGESAIGLAP HSDHGFLTIL LASCPGLEVL DRSSDTWRVV QQPRHALHVH
101: VGDCMEVLSN GRVKTAVHRA VLNHGEARIS MASIHSFAMH EKVSVAKELV DEQDPEKYKE SSFSDFLDYL MSNADKKRMS FLESLRT
101: VGDCMEVLSN GRVKTAVHRA VLNHGEARIS MASIHSFAMH EKVSVAKELV DEQDPEKYKE SSFSDFLDYL MSNADKKRMS FLESLRT
001: MEETNKSVVN DYFTSAMELT ESGDPHVPTR YILPPSQRPM LGPSIGTSTI NLPVIDLSFL HDPLLRLCVI HEIELACKGF GFFQVINHGI SSAVVKDAQD
101: SATRFFDLPA DEKMHLVSDN FQEPVRYGTS INHSTDRVHY WRDFIKHYSH PLSNWINLWP SNPPCYKEKV GKYAEATHVL HKQLIEAISE SLGLEKNYLQ
201: EEIEEGSQVM AVNCYPACPE PEIALGMPPH SDYGSLTILL QSSEGLQIKD CNNNWVCVPY IEGALIVQLG DQVEVMSNGI YKSVVHRVTV NKDYKRLSFA
301: SLHSLPMHKK ISPATQLVNE NKPAAYGEFS FNDFLDYISR NDITQKRFID TLRKKNL
101: SATRFFDLPA DEKMHLVSDN FQEPVRYGTS INHSTDRVHY WRDFIKHYSH PLSNWINLWP SNPPCYKEKV GKYAEATHVL HKQLIEAISE SLGLEKNYLQ
201: EEIEEGSQVM AVNCYPACPE PEIALGMPPH SDYGSLTILL QSSEGLQIKD CNNNWVCVPY IEGALIVQLG DQVEVMSNGI YKSVVHRVTV NKDYKRLSFA
301: SLHSLPMHKK ISPATQLVNE NKPAAYGEFS FNDFLDYISR NDITQKRFID TLRKKNL
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JAP7]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.