Factsheet for TraesCS6D01G270500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G318100.1	Wheat	plastid	97.67	97.67
TraesCS6A01G288400.1	Wheat	cytosol	96.21	92.44
TraesCS6D01G270600.1	Wheat	plastid	86.88	87.65
TraesCS6D01G270700.1	Wheat	cytosol, peroxisome, plastid	84.26	85.0
EES06032	Sorghum	cytosol	64.72	63.25
Zm00001d051896_P001	Maize	cytosol	62.97	61.71
TraesCS6D01G038500.1	Wheat	plastid	44.02	43.64
TraesCS6D01G038900.1	Wheat	cytosol	40.23	42.99
TraesCS6D01G035200.1	Wheat	cytosol	43.44	42.82
TraesCS7D01G160100.2	Wheat	plastid	40.82	42.04
TraesCS3D01G405500.1	Wheat	cytosol	41.11	40.4
TraesCS3D01G437500.2	Wheat	cytosol	40.52	39.94
KRH32174	Soybean	cytosol	36.15	36.36
VIT_07s0005g03150.t01	Wine grape	cytosol, peroxisome, plastid	35.86	36.07
Solyc09g066320.1.1	Tomato	cytosol, nucleus, peroxisome	31.2	34.74
PGSC0003DMT400030676	Potato	mitochondrion	34.4	34.6
Solyc06g083910.2.1	Tomato	cytosol	33.82	34.42
PGSC0003DMT400025150	Potato	cytosol	32.94	34.35
Solyc11g010410.1.1	Tomato	cytosol	33.53	34.23
PGSC0003DMT400041798	Potato	cytosol	33.53	34.23
PGSC0003DMT400051681	Potato	cytosol	33.24	33.83
TraesCS4D01G341800.1	Wheat	cytosol	32.94	33.63
TraesCS2D01G392800.1	Wheat	cytosol	33.24	33.53
Solyc07g043420.2.1	Tomato	cytosol	33.24	33.33
Solyc10g018190.1.1	Tomato	cytosol	31.78	33.33
Solyc11g010400.1.1	Tomato	cytosol	32.65	33.33
TraesCS3D01G411700.1	Wheat	cytosol	29.15	33.11
KRG93692	Soybean	cytosol, nucleus, peroxisome	32.36	32.94
KRH18340	Soybean	cytosol	32.36	32.94
PGSC0003DMT400054579	Potato	cytosol	32.65	32.84
Solyc02g070080.2.1	Tomato	cytosol	32.94	32.75
KRH01377	Soybean	cytosol, plastid	32.07	32.54
Solyc09g066310.2.1	Tomato	cytosol	31.2	32.52
TraesCS4D01G339800.1	Wheat	cytosol, plastid	31.2	31.85
TraesCS1D01G072700.1	Wheat	cytoskeleton, cytosol, peroxisome	32.94	31.56
Solyc10g018170.1.1	Tomato	cytosol	19.24	30.99
TraesCS6D01G000600.1	Wheat	mitochondrion	23.03	30.98
Solyc11g072200.1.1	Tomato	cytosol, peroxisome, plastid	31.78	30.97
PGSC0003DMT400070444	Potato	cytosol, peroxisome, plastid	31.78	30.97
PGSC0003DMT400025148	Potato	cytosol	25.07	30.94
TraesCS7D01G279500.1	Wheat	cytosol	34.11	30.63
PGSC0003DMT400025139	Potato	cytosol	29.74	30.54
Solyc06g073580.2.1	Tomato	cytosol	31.2	30.31
TraesCS3D01G345600.1	Wheat	cytosol	32.94	29.89
TraesCS4D01G195700.1	Wheat	cytosol	32.07	29.89
TraesCS2D01G392900.1	Wheat	plastid	33.53	29.49
TraesCS2D01G487400.1	Wheat	cytosol, nucleus, peroxisome	16.04	29.41
TraesCS2D01G539600.1	Wheat	mitochondrion, plastid	27.99	28.24
TraesCS6D01G310700.1	Wheat	plastid	27.41	28.14
TraesCS5D01G159800.1	Wheat	plastid	30.03	28.14
TraesCS4D01G002800.1	Wheat	cytosol, plastid	32.07	28.13
TraesCS2D01G539400.1	Wheat	cytosol, nucleus, peroxisome	26.53	27.74
TraesCS7D01G119600.1	Wheat	plastid	26.24	26.16
KRH45093	Soybean	cytosol, mitochondrion, nucleus, peroxisome	24.49	25.69
TraesCS5D01G058700.2	Wheat	cytosol	27.41	24.93
TraesCS2D01G493400.1	Wheat	golgi, nucleus	25.95	23.55
TraesCS3D01G316200.1	Wheat	cytosol	25.66	21.84
TraesCS6D01G004300.1	Wheat	cytosol	25.36	19.86

Protein Annotations

EnsemblPlants:TraesCS6D01G270500.1	EnsemblPlantsGene:TraesCS6D01G270500	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF220	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SEG:seg	SUPFAM:SSF51197	MapMan:50.1.13	:	:

Description

No Description!

Coordinates

chr6D:+:380177604..380178635

Molecular Weight (calculated)

36711.8 Da

IEP (calculated)

5.190

GRAVY (calculated)

-0.099

Length

343 amino acids

Sequence
(BLAST)

001: MAAEPLSNGA AHQSVPGRYI LPVHKRPSYS ANGKVAPPML PVVDLGGDDD GRIAEEIIRA GREFGFFQVV NHGVPEEVMG AMMRAAEEFF GLPANEKMAY
101: YSTDGKQLPR FHTSVRNGAG EEFLYWRDCL KLGCHPPEWP DNPRGLGAAL EPYTAAVMAA ARRVLRLAAV GLGLGEEHFE GSLSGGAMMN VNHYPPCPDP
201: SVTLGIAPHC DPGLVTVLME NVGGGLQMLV HDDGDAGGGG TMWVDVDAAP GALVLNFGHQ MEVVSNGRLR SGEHRVVTGA HVARTSLASF VWPELWCTVA
301: PAQELVLDAG EGPLYRPYSY GEFLGVYVAE AGDRDAVMAH FKH

Best Arabidopsis Sequence Match ( AT2G36690.2 )
(BLAST)

001: MSPSMIAPVM EEENKKYQKG VKHLCENGLT KVPTKYIWPE PDRPILTKSD KLIKPNKNLK LPLIDFAELL GPNRPHVLRT IAEACKTYGF FQVVNHGMEG
101: DVSKNMIDVC KRFFELPYEE RSKYMSSDMS APVRYGTSFN QIKDNVFCWR DFLKLYAHPL PDYLPHWPSS PSDFRSSAAT YAKETKEMFE MMVKAILESL
201: EIDGSDEAAK ELEEGSQVVV VNCYPPCPEP ELTLGMPPHS DYGFLTLLLQ DEVEGLQILY RDEWVTVDPI PGSFVVNVGD HLEIFSNGRY KSVLHRVLVN
301: STKPRISVAS LHSFPLTSVV KPSPKLVDKH NPSQYMDTDF TTFLQYITSR EPKWKNFLES RKIHHV

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4INZ9]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.