Factsheet for PGSC0003DMT400025139

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400051681	Potato	cytosol	48.5	48.07
VIT_07s0005g03150.t01	Wine grape	cytosol, peroxisome, plastid	48.8	47.8
PGSC0003DMT400054579	Potato	cytosol	45.81	44.87
KRH32174	Soybean	cytosol	44.61	43.7
KRH01377	Soybean	cytosol, plastid	43.41	42.9
KRH18340	Soybean	cytosol	41.92	41.54
PGSC0003DMT400041798	Potato	cytosol	41.62	41.37
KRG93692	Soybean	cytosol, nucleus, peroxisome	41.32	40.95
PGSC0003DMT400030676	Potato	mitochondrion	41.32	40.47
PGSC0003DMT400025150	Potato	cytosol	39.22	39.82
PGSC0003DMT400070444	Potato	cytosol, peroxisome, plastid	38.62	36.65
PGSC0003DMT400025148	Potato	cytosol	30.24	36.33
EER95911	Sorghum	cytosol	36.23	36.12
TraesCS1B01G052600.1	Wheat	cytosol	37.13	35.84
TraesCS7A01G159200.1	Wheat	plastid	35.33	35.44
TraesCS3B01G444500.1	Wheat	cytosol	36.23	35.28
TraesCS7B01G063700.1	Wheat	plastid	35.03	35.03
TraesCS6A01G033300.1	Wheat	plastid	36.23	34.97
TraesCS7D01G160100.2	Wheat	plastid	34.73	34.83
TraesCS3B01G479500.1	Wheat	cytosol	36.23	34.77
TraesCS6B01G046800.1	Wheat	plastid	35.93	34.68
TraesCS6D01G038500.1	Wheat	plastid	35.93	34.68
TraesCS3D01G405500.1	Wheat	cytosol	36.23	34.67
TraesCS3D01G437500.2	Wheat	cytosol	35.93	34.48
TraesCS6B01G044600.1	Wheat	cytosol	35.93	34.48
TraesCS6D01G035200.1	Wheat	cytosol	35.63	34.2
Os07t0169600-01	Rice	plastid	34.73	34.12
TraesCS3A01G445000.1	Wheat	cytosol	35.63	34.0
TraesCS6D01G038900.1	Wheat	cytosol	32.34	33.64
KXG23558	Sorghum	cytosol	34.43	33.63
TraesCS3B01G486500.1	Wheat	cytosol	35.03	33.52
PGSC0003DMT400069218	Potato	cytosol	34.13	33.33
PGSC0003DMT400001570	Potato	cytosol	33.53	33.23
HORVU4Hr1G089480.1	Barley	cytosol	34.73	32.95
TraesCS1A01G008400.1	Wheat	mitochondrion	32.04	32.82
HORVU7Hr1G033360.11	Barley	cytosol	35.33	32.6
Zm00001d020163_P001	Maize	cytosol	26.05	32.58
Zm00001d051896_P001	Maize	cytosol	34.13	32.57
EES06032	Sorghum	cytosol	34.13	32.48
Zm00001d035308_P001	Maize	extracellular	33.23	32.36
HORVU4Hr1G081480.3	Barley	plasma membrane	32.93	32.16
KRH45093	Soybean	cytosol, mitochondrion, nucleus, peroxisome	31.44	32.11
TraesCS7A01G037700.1	Wheat	cytosol	26.35	31.88
TraesCS6B01G048100.1	Wheat	plastid	31.74	31.83
HORVU7Hr1G122350.2	Barley	cytosol, peroxisome, plastid	32.04	31.66
HORVU4Hr1G081500.1	Barley	cytosol, peroxisome	20.36	31.34
HORVU6Hr1G010980.1	Barley	cytosol	32.34	31.21
TraesCS6A01G055700.1	Wheat	cytosol	32.34	31.21
TraesCS6B01G317900.1	Wheat	cytosol	25.15	31.11
TraesCS6A01G031500.1	Wheat	cytosol	23.65	31.1
HORVU4Hr1G081550.2	Barley	peroxisome, plastid	26.35	30.99
TraesCS6D01G270700.1	Wheat	cytosol, peroxisome, plastid	31.44	30.88
TraesCS6D01G270600.1	Wheat	plastid	31.44	30.88
TraesCS6B01G318000.1	Wheat	plastid	31.44	30.88
HORVU4Hr1G081490.1	Barley	cytosol, peroxisome	32.93	30.73
TraesCS7A01G026100.1	Wheat	cytosol	28.74	30.67
Zm00001d041726_P001	Maize	plastid	31.74	30.64
TraesCS6A01G030500.1	Wheat	plastid	26.95	30.41
HORVU1Hr1G071670.2	Barley	cytosol	37.43	30.27
EES16047	Sorghum	cytosol	30.84	30.21
TraesCS6B01G047100.1	Wheat	extracellular, vacuole	31.44	30.17
TraesCS6A01G288300.1	Wheat	plastid	30.54	30.0
KXG23555	Sorghum	cytosol	30.24	29.97
TraesCS6D01G270500.1	Wheat	plastid	30.54	29.74
TraesCS6B01G318100.1	Wheat	plastid	30.54	29.74
EES16044	Sorghum	cytosol	29.94	29.67
PGSC0003DMT400049193	Potato	cytosol, mitochondrion, peroxisome	16.17	29.51
TraesCS3D01G411700.1	Wheat	cytosol	26.65	29.47
PGSC0003DMT400036565	Potato	cytosol	29.94	28.41
TraesCS6A01G288400.1	Wheat	cytosol	29.94	28.01
PGSC0003DMT400013924	Potato	cytosol	9.88	27.97
PGSC0003DMT400028828	Potato	cytosol	29.94	27.78
PGSC0003DMT400067044	Potato	cytosol	27.84	27.68
PGSC0003DMT400049192	Potato	cytosol	30.24	27.6
PGSC0003DMT400031149	Potato	cytosol	29.34	27.53
PGSC0003DMT400013913	Potato	cytoskeleton, cytosol, peroxisome	21.56	27.48
TraesCS6A01G034100.1	Wheat	cytosol, peroxisome, plastid	24.85	26.77
PGSC0003DMT400067586	Potato	cytosol, peroxisome, plastid	28.14	26.63
PGSC0003DMT400013920	Potato	cytoskeleton, cytosol, peroxisome	20.96	26.52
PGSC0003DMT400009175	Potato	cytosol	27.84	25.83
PGSC0003DMT400083733	Potato	cytosol	27.84	25.83
PGSC0003DMT400092726	Potato	cytosol, peroxisome, plastid	26.95	25.64
PGSC0003DMT400088016	Potato	cytosol	24.25	24.85
PGSC0003DMT400009900	Potato	cytosol	27.84	24.35
PGSC0003DMT400070302	Potato	cytosol	26.05	23.58
PGSC0003DMT400029386	Potato	cytosol, nucleus, peroxisome	25.45	22.67
PGSC0003DMT400083728	Potato	cytosol	11.08	22.16
TraesCS6D01G000600.1	Wheat	mitochondrion	16.77	21.96
PGSC0003DMT400058554	Potato	cytosol	24.85	18.24

Protein Annotations

EntrezGene:107061388	Gene3D:2.60.120.330	MapMan:50.1.13	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M1AL25	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171
PFAM:PF14226	EnsemblPlantsGene:PGSC0003DMG400009715	PGSC:PGSC0003DMG400009715	EnsemblPlants:PGSC0003DMT400025139	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF124	SUPFAM:SSF51197	UniParc:UPI000296E426	RefSeq:XP_015166048.1	SEG:seg	:

Description

F3H [Source:PGSC_GENE;Acc:PGSC0003DMG400009715]

Coordinates

chr9:+:49808792..49810202

Molecular Weight (calculated)

37528.9 Da

IEP (calculated)

4.614

GRAVY (calculated)

-0.205

Length

334 amino acids

Sequence
(BLAST)

001: MSNFVSSWAK NIVTLPENYV MPPDKRPNEP VSIGNNIPVI DLAKASSSTI NHAELVQEIL KASQEFGLFQ IINHGVSEKL MDDVMDLFKE LFDMSVEMKD
101: KLFSEDSNKS CKVFGNRYIN GEIRYWRDLL IQPVIPIQED TQHWLENPAR YRELVETYST EVRKLCTTIV ELIGEGLGVE LGEEMIKDQA LGANYYPPCP
201: DPSSAMGSPP HCDPNIITFL QQQVYGLQIF KDGHWIGVQP LPYAFVVIIG YQMQIISNNK LVACEHRAVT NSESGRITLG TFVSPAGDCV VEPAKALVNG
301: DSPALYRAFK YEEFMNDFMA GKEPHKTLTL DNIS

Best Arabidopsis Sequence Match ( AT3G11180.2 )
(BLAST)

001: MNNLDEIKIE SKTCLNDQEQ EVKIDNMHMS DQDKNKIEIK NKSGLGEKWP EPIVRVQSLA ESNLTSLPDR YIKPPSQRPQ TTIIDHQPEV ADINIPIIDL
101: DSLFSGNEDD KKRISEACRE WGFFQVINHG VKPELMDAAR ETWKSFFNLP VEAKEVYSNS PRTYEGYGSR LGVEKGAILD WNDYYYLHFL PLALKDFNKW
201: PSLPSNIREM NDEYGKELVK LGGRLMTILS SNLGLRAEQL QEAFGGEDVG ACLRVNYYPK CPQPELALGL SPHSDPGGMT ILLPDDQVVG LQVRHGDTWI
301: TVNPLRHAFI VNIGDQIQIL SNSKYKSVEH RVIVNSEKER VSLAFFYNPK SDIPIQPMQQ LVTSTMPPLY PPMTFDQYRL FIRTQGYRSY GSLKNYLEIP
401: KDW

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J670]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.