Factsheet for TraesCS1B01G052600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G008400.1	Wheat	mitochondrion	80.35	85.28
TraesCS6B01G046800.1	Wheat	plastid	65.03	65.03
TraesCS3B01G444500.1	Wheat	cytosol	64.45	65.01
TraesCS6B01G044600.1	Wheat	cytosol	58.96	58.62
TraesCS3B01G479500.1	Wheat	cytosol	58.38	58.05
TraesCS3B01G486500.1	Wheat	cytosol	57.23	56.73
TraesCS7B01G063700.1	Wheat	plastid	46.53	48.2
TraesCS6B01G318000.1	Wheat	plastid	43.64	44.41
TraesCS6B01G318100.1	Wheat	plastid	42.49	42.86
VIT_07s0005g03150.t01	Wine grape	cytosol, peroxisome, plastid	40.75	41.35
TraesCS6B01G317900.1	Wheat	cytosol	32.08	41.11
TraesCS6B01G047100.1	Wheat	extracellular, vacuole	41.04	40.8
TraesCS6B01G048100.1	Wheat	plastid	39.02	40.54
KRH32174	Soybean	cytosol	39.6	40.18
PGSC0003DMT400051681	Potato	cytosol	37.86	38.87
PGSC0003DMT400030676	Potato	mitochondrion	38.15	38.71
PGSC0003DMT400054579	Potato	cytosol	38.15	38.71
Solyc06g083910.2.1	Tomato	cytosol	37.57	38.58
KRH18340	Soybean	cytosol	37.57	38.58
KRG93692	Soybean	cytosol, nucleus, peroxisome	37.28	38.28
TraesCS4B01G346900.1	Wheat	cytosol	36.99	38.1
Solyc02g070080.2.1	Tomato	cytosol	37.57	37.68
Solyc07g043420.2.1	Tomato	cytosol	36.99	37.43
TraesCS2B01G413000.1	Wheat	cytosol, nucleus, peroxisome	36.71	37.35
PGSC0003DMT400025139	Potato	cytosol	35.84	37.13
Solyc10g018190.1.1	Tomato	cytosol	34.97	37.0
KRH01377	Soybean	cytosol, plastid	36.13	36.98
Solyc09g066320.1.1	Tomato	cytosol, nucleus, peroxisome	32.66	36.69
PGSC0003DMT400025150	Potato	cytosol	34.1	35.87
Solyc09g066310.2.1	Tomato	cytosol	33.81	35.56
Solyc11g010410.1.1	Tomato	cytosol	34.39	35.42
PGSC0003DMT400025148	Potato	cytosol	27.75	34.53
TraesCS2B01G412900.1	Wheat	plastid	34.68	34.38
PGSC0003DMT400041798	Potato	cytosol	32.95	33.93
Solyc11g010400.1.1	Tomato	cytosol	32.66	33.63
TraesCS4B01G344900.1	Wheat	cytosol, plastid	28.61	32.04
Solyc10g018170.1.1	Tomato	cytosol	19.65	31.92
TraesCS4B01G344800.1	Wheat	cytosol	29.77	31.79
PGSC0003DMT400070444	Potato	cytosol, peroxisome, plastid	32.08	31.53
Solyc11g072200.1.1	Tomato	cytosol, peroxisome, plastid	32.08	31.53
TraesCS6B01G362100.1	Wheat	cytosol	29.77	30.84
TraesCS2B01G514200.1	Wheat	cytosol, nucleus, peroxisome	28.61	30.28
TraesCS2B01G568800.1	Wheat	cytosol, nucleus, peroxisome	28.61	30.18
TraesCS5B01G153100.1	Wheat	cytosol, nucleus, peroxisome	31.79	30.05
Solyc06g073580.2.1	Tomato	cytosol	30.64	30.03
TraesCS4B01G003300.1	Wheat	plastid	33.53	29.97
TraesCS2B01G613300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	30.06	29.8
KRH45093	Soybean	cytosol, mitochondrion, nucleus, peroxisome	28.03	29.66
TraesCS7B01G020000.1	Wheat	plastid	29.48	29.48
TraesCS3B01G383900.1	Wheat	cytosol	31.21	28.95
TraesCS2B01G568900.1	Wheat	mitochondrion, plastid	28.03	28.87
TraesCS1B01G088600.1	Wheat	cytoskeleton, cytosol, peroxisome	29.77	28.77
TraesCS7B01G180300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	33.24	28.47
TraesCS4B01G328300.1	Wheat	cytosol	21.68	27.99
TraesCS4B01G195000.1	Wheat	cytosol	29.48	27.72
TraesCS2B01G521500.1	Wheat	golgi	30.06	27.51
TraesCS5B01G053400.2	Wheat	cytosol	30.06	26.33
TraesCS2B01G613000.1	Wheat	cytosol, extracellular, peroxisome	27.17	26.11
TraesCS3B01G351600.1	Wheat	cytosol	26.3	25.35
TraesCS6B01G006200.1	Wheat	cytosol	28.61	22.5

Protein Annotations

EnsemblPlants:TraesCS1B01G052600.1	EnsemblPlantsGene:TraesCS1B01G052600	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF220	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SEG:seg	SUPFAM:SSF51197	MapMan:50.1.13	:	:

Description

No Description!

Coordinates

chr1B:-:33008587..33009810

Molecular Weight (calculated)

38199.6 Da

IEP (calculated)

5.092

GRAVY (calculated)

-0.078

Length

346 amino acids

Sequence
(BLAST)

001: MGLLSDTPVH HAVPDEYVLP PEKRPETDEF VDPTVTLPVI DLAAGRGRHL VVNEIIKAGK EFGFFQVVNH GVRDEVVGAF RSAAAEFFAM PAEEKLPYYS
101: DDLTKPFRVD TSTTYVLDRS SGGRYWRDYL QLQCFPVDRY SQDWPAEPAA FVPSLAAYAK AVQTLAATLL GLIAEGLGLE ESFFRGELTG GGTLMNVNWY
201: PPCPDPSLTL GLLPHCDRPL LTVLSQGDVS GLQAKHKGRW IAVQPVPNTF VINFGHLMEI VTNGLLQSVE HRAVTNSSAA RLSVVTIMLP NMDCRIEPAP
301: ALVTEGEQAK FRPFLFREFN EAYAAAAANR EDVLQRFRIH PAGTME

Best Arabidopsis Sequence Match ( AT2G44800.1 )
(BLAST)

001: MEETKMSLLD DSFTSAMTLT NSGVPQVPDR YVLPPSQRPA LGSSLGTSET TLPVIDLSLL HQPFLRSLAI HEISMACKEF GFFQVINHGI PSSVVNDALD
101: AATQFFDLPV EEKMLLVSAN VHEPVRYGTS LNHSTDRVHY WRDFIKHYSH PLSKWIDMWP SNPPCYKDKV GKYAEATHLL HKQLIEAISE SLGLEKNYLQ
201: EEIEEGSQVM AVNCYPACPE PEMALGMPPH SDFSSLTILL QSSKGLQIMD CNKNWVCVPY IEGALIVQLG DQVEVMSNGI YKSVIHRVTV NKEVKRLSFA
301: SLHSLPLHKK ISPAPKLVNP NNAPAYGEFS FNDFLNYISS NDFIQERFID TIKKSSS

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IV21]
SUBAcon: [peroxisome,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.