Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G094280.1 | Barley | cytosol, peroxisome | 80.68 | 91.97 |
| TraesCS6D01G004300.1 | Wheat | cytosol | 90.91 | 91.32 |
| TraesCS6A01G041800.1 | Wheat | cytosol | 80.91 | 90.59 |
| TraesCS2B01G613000.1 | Wheat | cytosol, extracellular, peroxisome | 68.18 | 83.33 |
| Os01t0372500-00 | Rice | cytosol | 56.14 | 65.87 |
| Os06t0626700-00 | Rice | cytosol | 55.68 | 65.68 |
| Zm00001d014914_P001 | Maize | cytosol | 56.14 | 62.53 |
| EES04312 | Sorghum | cytosol | 55.91 | 61.65 |
| GSMUA_Achr5P04080_001 | Banana | cytosol, peroxisome, plastid | 42.5 | 51.94 |
| VIT_02s0025g04720.t01 | Wine grape | cytosol, peroxisome, plastid | 38.64 | 47.89 |
| KRH77456 | Soybean | cytosol | 37.27 | 46.59 |
| AT4G22880.2 | Thale cress | cytosol | 37.27 | 46.07 |
| Bra019350.1-P | Field mustard | cytosol | 37.27 | 45.94 |
| KRH27988 | Soybean | cytosol | 36.36 | 45.45 |
| CDX94133 | Canola | cytosol | 36.82 | 45.25 |
| Bra013652.1-P | Field mustard | cytosol | 36.59 | 44.97 |
| CDY41286 | Canola | cytosol | 36.59 | 44.97 |
| CDY10816 | Canola | cytosol | 36.14 | 44.41 |
| CDX98776 | Canola | cytosol | 37.05 | 41.48 |
| TraesCS4B01G344800.1 | Wheat | cytosol | 29.77 | 40.43 |
| Solyc08g080040.2.1 | Tomato | cytosol | 38.41 | 40.43 |
| TraesCS6B01G362100.1 | Wheat | cytosol | 30.68 | 40.42 |
| TraesCS4B01G344900.1 | Wheat | cytosol, plastid | 27.05 | 38.51 |
| PGSC0003DMT400058554 | Potato | cytosol | 39.77 | 38.46 |
| TraesCS1B01G088600.1 | Wheat | cytoskeleton, cytosol, peroxisome | 29.77 | 36.59 |
| TraesCS4B01G328300.1 | Wheat | cytosol | 20.68 | 33.96 |
| TraesCS3B01G383900.1 | Wheat | cytosol | 28.41 | 33.51 |
| TraesCS4B01G195000.1 | Wheat | cytosol | 27.73 | 33.15 |
| TraesCS4B01G346900.1 | Wheat | cytosol | 23.86 | 31.25 |
| TraesCS7B01G020000.1 | Wheat | plastid | 24.32 | 30.92 |
| TraesCS5B01G153100.1 | Wheat | cytosol, nucleus, peroxisome | 25.68 | 30.87 |
| TraesCS2B01G413000.1 | Wheat | cytosol, nucleus, peroxisome | 23.41 | 30.29 |
| TraesCS2B01G412900.1 | Wheat | plastid | 23.41 | 29.51 |
| TraesCS3B01G444500.1 | Wheat | cytosol | 22.5 | 28.86 |
| TraesCS1B01G052600.1 | Wheat | cytosol | 22.5 | 28.61 |
| TraesCS2B01G613300.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 22.27 | 28.08 |
| TraesCS6B01G046800.1 | Wheat | plastid | 21.82 | 27.75 |
| TraesCS7B01G063700.1 | Wheat | plastid | 20.68 | 27.25 |
| TraesCS6B01G318000.1 | Wheat | plastid | 20.68 | 26.76 |
| TraesCS6B01G318100.1 | Wheat | plastid | 20.68 | 26.53 |
| TraesCS3B01G479500.1 | Wheat | cytosol | 20.91 | 26.44 |
| TraesCS2B01G521500.1 | Wheat | golgi | 22.27 | 25.93 |
| TraesCS6B01G317900.1 | Wheat | cytosol | 15.91 | 25.93 |
| TraesCS6B01G048100.1 | Wheat | plastid | 19.55 | 25.83 |
| TraesCS3B01G486500.1 | Wheat | cytosol | 20.45 | 25.79 |
| TraesCS6B01G047100.1 | Wheat | extracellular, vacuole | 20.23 | 25.57 |
| TraesCS6B01G044600.1 | Wheat | cytosol | 20.0 | 25.29 |
| TraesCS5B01G053400.2 | Wheat | cytosol | 22.27 | 24.81 |
| TraesCS4B01G003300.1 | Wheat | plastid | 21.82 | 24.81 |
| TraesCS7B01G180300.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 22.73 | 24.75 |
| TraesCS3B01G351600.1 | Wheat | cytosol | 19.77 | 24.23 |
| TraesCS2B01G568900.1 | Wheat | mitochondrion, plastid | 18.41 | 24.11 |
| TraesCS2B01G514200.1 | Wheat | cytosol, nucleus, peroxisome | 17.27 | 23.24 |
| TraesCS2B01G568800.1 | Wheat | cytosol, nucleus, peroxisome | 16.82 | 22.56 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G006200.1 | EnsemblPlantsGene:TraesCS6B01G006200 | Gene3D:2.60.120.330 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:DIOX_N | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF190 | PFAM:PF03171 | PFAM:PF14226 |
| PFscan:PS51471 | SEG:seg | SUPFAM:SSF51197 | MapMan:9.2.2.9.2 | : | : |
Description
No Description!
Coordinates
chr6B:+:4451589..4452911
Molecular Weight (calculated)
47872.4 Da
IEP (calculated)
4.510
GRAVY (calculated)
-0.327
Length
440 amino acids
Sequence
(BLAST)
(BLAST)
001: MARVEALSMS GATAIPAEYV RPQEERQGLG DAYDEAAASW SATGSPRIPV VDVAAFDATD PASPASLAVV DAVRAAAEEW GVMHVAGHGI PEDLIDALRS
101: AGTGFFRMPI EDKESYANDP AAGRLEGYGS RLAGSAGEDV KREWEDYLFH MLHPDARADH TLWPAHPPEY VPVTKAFGEH VSALSSRLLA ILSLGLGVPA
201: GTLERRLRLT SGEAEVEDDL LLKLKINYYP RCPQPELAVG VEAHTDVSAL SFILTNGVPG LQVLLPGDGQ SWVTARDEPG TLVVHVGDAL EILSNGRYTS
301: VLHRGLVNRQ AVRVSWVVFA EPPPDSVLLR PLPELVEGDG AETPRFEPRT FRQHLERKVL KKNNDQQEEE EVKKPPVAAQ EEEKEEATKL PVTALVEEKE
401: EATKPPVACE DEHKVVKKEQ ISEEEETKMA PVAANLVEVN
101: AGTGFFRMPI EDKESYANDP AAGRLEGYGS RLAGSAGEDV KREWEDYLFH MLHPDARADH TLWPAHPPEY VPVTKAFGEH VSALSSRLLA ILSLGLGVPA
201: GTLERRLRLT SGEAEVEDDL LLKLKINYYP RCPQPELAVG VEAHTDVSAL SFILTNGVPG LQVLLPGDGQ SWVTARDEPG TLVVHVGDAL EILSNGRYTS
301: VLHRGLVNRQ AVRVSWVVFA EPPPDSVLLR PLPELVEGDG AETPRFEPRT FRQHLERKVL KKNNDQQEEE EVKKPPVAAQ EEEKEEATKL PVTALVEEKE
401: EATKPPVACE DEHKVVKKEQ ISEEEETKMA PVAANLVEVN
001: MVAVERVESL AKSGIISIPK EYIRPKEELE SINDVFLEEK KEDGPQVPTI DLKNIESDDE KIRENCIEEL KKASLDWGVM HLINHGIPAD LMERVKKAGE
101: EFFSLSVEEK EKYANDQATG KIQGYGSKLA NNASGQLEWE DYFFHLAYPE EKRDLSIWPK TPSDYIEATS EYAKCLRLLA TKVFKALSVG LGLEPDRLEK
201: EVGGLEELLL QMKINYYPKC PQPELALGVE AHTDVSALTF ILHNMVPGLQ LFYEGKWVTA KCVPDSIVMH IGDTLEILSN GKYKSILHRG LVNKEKVRIS
301: WAVFCEPPKD KIVLKPLPEM VSVESPAKFP PRTFAQHIEH KLFGKEQEEL VSEKND
101: EFFSLSVEEK EKYANDQATG KIQGYGSKLA NNASGQLEWE DYFFHLAYPE EKRDLSIWPK TPSDYIEATS EYAKCLRLLA TKVFKALSVG LGLEPDRLEK
201: EVGGLEELLL QMKINYYPKC PQPELALGVE AHTDVSALTF ILHNMVPGLQ LFYEGKWVTA KCVPDSIVMH IGDTLEILSN GKYKSILHRG LVNKEKVRIS
301: WAVFCEPPKD KIVLKPLPEM VSVESPAKFP PRTFAQHIEH KLFGKEQEEL VSEKND
Arabidopsis Description
LDOXAT4G22880 protein [Source:UniProtKB/TrEMBL;Acc:Q0WWD6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.