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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • peroxisome 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra019350.1-P Field mustard cytosol 89.57 98.6
CDX94133 Canola cytosol 88.04 96.65
CDY10816 Canola cytosol 84.48 92.74
CDY41286 Canola cytosol 83.72 91.9
AT4G22880.2 Thale cress cytosol 83.21 91.85
KRH77456 Soybean cytosol 70.48 78.69
VIT_02s0025g04720.t01 Wine grape cytosol, peroxisome, plastid 70.74 78.31
KRH27988 Soybean cytosol 69.21 77.27
GSMUA_Achr5P04080_001 Banana cytosol, peroxisome, plastid 59.03 64.44
Solyc08g080040.2.1 Tomato cytosol 67.68 63.64
PGSC0003DMT400058554 Potato cytosol 67.43 58.24
Zm00001d038073_P001 Maize cytosol 26.46 47.93
Zm00001d048800_P001 Maize cytosol 23.66 47.45
Zm00001d014914_P001 Maize cytosol 46.82 46.58
EES04312 Sorghum cytosol 47.07 46.37
Os01t0372500-00 Rice cytosol 44.02 46.13
Os06t0626700-00 Rice cytosol 43.77 46.11
TraesCS2B01G613000.1 Wheat cytosol, extracellular, peroxisome 39.44 43.06
HORVU5Hr1G094280.1 Barley cytosol, peroxisome 42.24 43.01
TraesCS6A01G041800.1 Wheat cytosol 40.2 40.2
CDY21556 Canola cytoskeleton, cytosol, peroxisome 33.84 39.58
CDX69931 Canola cytoskeleton, cytosol, peroxisome 33.84 39.58
CDY39565 Canola cytosol 29.26 37.7
CDY69013 Canola cytosol 29.26 37.46
TraesCS6A01G001500.1 Wheat cytosol 41.73 37.44
CDY48154 Canola cytosol 29.01 37.38
CDY41522 Canola cytosol 28.24 37.37
TraesCS6B01G006200.1 Wheat cytosol 41.48 37.05
TraesCS6D01G004300.1 Wheat cytosol 41.22 36.99
CDX81188 Canola cytosol 30.03 36.88
CDY39860 Canola cytosol 28.24 35.92
CDY41520 Canola cytosol 22.14 35.22
CDY31361 Canola cytosol 27.48 34.84
CDX97750 Canola cytosol 19.08 33.94
CDY11329 Canola cytosol 31.3 33.06
CDY18399 Canola plastid 29.77 33.05
CDY07746 Canola plastid 29.52 32.86
CDX93319 Canola plastid 29.26 32.58
CDY68873 Canola plastid 29.26 32.58
CDY14476 Canola plastid 29.01 32.29
CDY32234 Canola cytosol, nucleus, peroxisome 27.99 32.16
CDY34450 Canola cytosol 27.99 32.16
CDX80966 Canola cytosol 30.28 31.99
CDX76068 Canola cytosol 29.77 31.97
CDY02966 Canola cytosol 29.26 31.59
CDY04960 Canola cytosol 29.52 31.18
CDY14105 Canola cytosol, nucleus, peroxisome 30.03 30.73
CDY05412 Canola mitochondrion 26.46 30.5
CDX88109 Canola mitochondrion 26.21 30.21
CDY05445 Canola plastid 26.21 30.21
CDX80450 Canola mitochondrion 25.7 29.62
CDX99549 Canola vacuole 16.03 29.58
CDX86858 Canola cytosol 25.45 29.5
CDY05103 Canola cytosol, nucleus, peroxisome 26.21 29.34
CDX99548 Canola cytosol 25.19 29.2
CDX90656 Canola cytosol 25.7 28.86
CDX73739 Canola cytosol 26.21 28.77
CDX90761 Canola plastid 25.45 28.57
CDY29008 Canola cytosol 25.19 28.29
CDX77983 Canola cytosol 25.7 28.21
CDX99550 Canola cytosol 24.43 28.15
CDY08545 Canola cytosol 28.75 27.9
CDX75020 Canola cytosol 25.95 27.72
CDY01001 Canola cytosol 28.5 27.65
CDX90759 Canola cytosol 21.12 27.48
CDY31363 Canola cytosol 29.26 27.25
CDY56988 Canola peroxisome 24.43 26.89
CDY23457 Canola cytosol, nucleus, peroxisome 24.17 26.69
CDY30486 Canola cytosol, nucleus, peroxisome 24.17 26.69
CDX76159 Canola cytoskeleton, cytosol, peroxisome 19.85 26.62
CDX74687 Canola cytosol 23.66 25.91
CDY42687 Canola peroxisome 23.41 25.7
CDX76765 Canola cytosol 15.27 25.21
CDY65238 Canola cytosol, nucleus, peroxisome 23.16 25.21
CDX70044 Canola cytosol, nucleus, peroxisome 23.16 25.21
CDX72185 Canola nucleus 28.5 22.22
CDY27251 Canola nucleus 28.24 17.87
CDY41521 Canola cytosol, mitochondrion 0.76 14.29
Protein Annotations
Gene3D:2.60.120.330MapMan:9.2.2.9.2GO:A0A078EC83EnsemblPlants:CDX98776ProteinID:CDX98776ProteinID:CDX98776.1
InterPro:DIOX_NGO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0016491
GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00106858001InterPro:IPNS-likeInterPro:IPR005123InterPro:IPR027443InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171PFAM:PF14226PFscan:PS51471PANTHER:PTHR10209PANTHER:PTHR10209:SF190SUPFAM:SSF51197
TMHMM:TMhelixUniParc:UPI0004EE4721SEG:seg:::
Description
BnaA03g45610D
Coordinates
chrLK031906:-:1173605..1175050
Molecular Weight (calculated)
45033.6 Da
IEP (calculated)
5.396
GRAVY (calculated)
-0.284
Length
393 amino acids
Sequence
(BLAST)
001: MVEVERVENL ANSGIKSIPK EYIRPKEELE SINDVFQEEK KEDGPQVPTI DLQNIESEDE TVREKCIEEL KKASMDWGVM HLVNHGVPVD LMERVKKAGE
101: EFFGLSVEEK EKYANDQATG KIQGYGSKLA NNASGQLEWE DYFFHLVYPE DKRDLSLWPK TPSDYVEATS EYAKYLRLLA TKVFKALSVG LGLEPDRLEK
201: EVGGLEELLL QMKINYYPKC PQPELALGVE AHTDVSALTF ILHNMVPGLQ LFYEGKWVIA KCVPDSIVMH IGDTLEILSN GKFKSILHRG LVNKEKVRIS
301: WAVFCEPPKD KIVLKPLPEM VSAETPAKFP PRTFAQHIEH KLFRRNEQEE LVPETKDLKA YICLKIVLKV FSDLHLCFLY LFFLMLLTVK RSC
Best Arabidopsis Sequence Match ( AT4G22880.1 )
(BLAST)
001: MVAVERVESL AKSGIISIPK EYIRPKEELE SINDVFLEEK KEDGPQVPTI DLKNIESDDE KIRENCIEEL KKASLDWGVM HLINHGIPAD LMERVKKAGE
101: EFFSLSVEEK EKYANDQATG KIQGYGSKLA NNASGQLEWE DYFFHLAYPE EKRDLSIWPK TPSDYIEATS EYAKCLRLLA TKVFKALSVG LGLEPDRLEK
201: EVGGLEELLL QMKINYYPKC PQPELALGVE AHTDVSALTF ILHNMVPGLQ LFYEGKWVTA KCVPDSIVMH IGDTLEILSN GKYKSILHRG LVNKEKVRIS
301: WAVFCEPPKD KIVLKPLPEM VSVESPAKFP PRTFAQHIEH KLFGKEQEEL VSEKND
Arabidopsis Description
LDOXAT4G22880 protein [Source:UniProtKB/TrEMBL;Acc:Q0WWD6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.