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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • nucleus 1
  • peroxisome 2
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:peroxisome
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY56988 Canola peroxisome 94.97 95.24
AT3G60290.1 Thale cress cytosol, nucleus, peroxisome 82.96 83.19
CDY30486 Canola cytosol, nucleus, peroxisome 77.93 78.37
CDX74687 Canola cytosol 77.93 77.72
CDY23457 Canola cytosol, nucleus, peroxisome 75.42 75.84
KRH40180 Soybean plastid 58.38 59.38
PGSC0003DMT400067044 Potato cytosol 53.63 57.14
PGSC0003DMT400092726 Potato cytosol, peroxisome, plastid 53.07 54.13
Solyc01g090140.1.1 Tomato plastid 32.4 51.79
PGSC0003DMT400088016 Potato cytosol 45.81 50.31
CDX70044 Canola cytosol, nucleus, peroxisome 46.37 45.98
CDY65238 Canola cytosol, nucleus, peroxisome 46.09 45.71
CDX75020 Canola cytosol 38.83 37.77
CDY05445 Canola plastid 35.75 37.54
CDY05412 Canola mitochondrion 35.47 37.24
CDX80450 Canola mitochondrion 35.2 36.95
CDX88109 Canola mitochondrion 34.92 36.66
CDY05103 Canola cytosol, nucleus, peroxisome 34.08 34.76
CDX90761 Canola plastid 33.8 34.57
CDX86858 Canola cytosol 32.4 34.22
CDX99548 Canola cytosol 32.12 33.92
CDX99550 Canola cytosol 31.56 33.14
CDX90759 Canola cytosol 27.93 33.11
CDX99549 Canola vacuole 19.55 32.86
CDY21556 Canola cytoskeleton, cytosol, peroxisome 30.73 32.74
CDX69931 Canola cytoskeleton, cytosol, peroxisome 30.73 32.74
CDY07746 Canola plastid 31.84 32.29
CDY14476 Canola plastid 31.84 32.29
CDY18399 Canola plastid 31.84 32.2
CDY34450 Canola cytosol 30.45 31.87
CDY32234 Canola cytosol, nucleus, peroxisome 30.17 31.58
CDY68873 Canola plastid 31.01 31.44
CDX93319 Canola plastid 31.01 31.44
CDY11329 Canola cytosol 32.4 31.18
CDX76068 Canola cytosol 31.84 31.15
CDY02966 Canola cytosol 31.56 31.04
CDY69013 Canola cytosol 26.54 30.94
CDX80966 Canola cytosol 32.12 30.91
CDY39565 Canola cytosol 26.26 30.82
CDY04960 Canola cytosol 31.84 30.65
CDY41522 Canola cytosol 25.42 30.64
CDY48154 Canola cytosol 25.7 30.16
CDY01001 Canola cytosol 33.8 29.88
CDY08545 Canola cytosol 33.52 29.63
CDY14105 Canola cytosol, nucleus, peroxisome 31.56 29.43
CDY41520 Canola cytosol 20.11 29.15
CDY39860 Canola cytosol 24.02 27.83
CDX77983 Canola cytosol 27.65 27.65
CDX73739 Canola cytosol 27.65 27.65
CDX81188 Canola cytosol 24.58 27.5
CDY31361 Canola cytosol 23.74 27.42
CDX97750 Canola cytosol 16.76 27.15
CDX90656 Canola cytosol 26.54 27.14
CDY29008 Canola cytosol 25.98 26.57
CDY41286 Canola cytosol 25.98 25.98
CDX94133 Canola cytosol 25.7 25.7
CDY10816 Canola cytosol 25.42 25.42
CDX76765 Canola cytosol 16.2 24.37
CDX76159 Canola cytoskeleton, cytosol, peroxisome 19.55 23.89
CDX98776 Canola cytosol 25.7 23.41
CDX72185 Canola nucleus 31.84 22.62
CDY31363 Canola cytosol 23.74 20.14
CDY41521 Canola cytosol, mitochondrion 1.12 19.05
CDY27251 Canola nucleus 31.56 18.2
Protein Annotations
Gene3D:2.60.120.330MapMan:50.1.13GO:A0A078HXT9UniProt:A0A078HXT9EnsemblPlants:CDY42687ProteinID:CDY42687
ProteinID:CDY42687.1InterPro:DIOX_NGO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0008150
GO:GO:0008152GO:GO:0016491GO:GO:0046872GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00075211001InterPro:IPNS-like
InterPro:IPR005123InterPro:IPR027443InterPro:Oxoglu/Fe-dep_dioxygenasePFAM:PF03171PFAM:PF14226PFscan:PS51471
PANTHER:PTHR10209PANTHER:PTHR10209:SF224SUPFAM:SSF51197UniParc:UPI0004EDAE82::
Description
BnaC04g22190DBnaC04g22190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HXT9]
Coordinates
chrLK032531:+:236759..243317
Molecular Weight (calculated)
40248.2 Da
IEP (calculated)
6.561
GRAVY (calculated)
-0.246
Length
358 amino acids
Sequence
(BLAST)
001: MEETNKNVLG DCFTSAMALT ESGVPHVPTR YILPPSQRPV LSPSIGTGSI NLPVIDLSFL HDPLLRPSVI HEIEMACKEF GFFQVTNHGI SSSVMRDALD
101: AATRFFDLPS HEKMLLVSDD VHTPVRYGTS INHATDSVHY WRDFIKHYSH PLSKWIDLWP SNPPCYKQKV GKYSEATHVL HKQLMEAISE SLGLEKSYLQ
201: EELEEGSQVM AVNCYPACPQ PGIALGMPPH SDFSSLTILL QSSQGLQIKD KNNNWICVPY IEGALIVQLG DQVEVMSNGI YRSVVHRVTV NKDVNRLSFA
301: SLHSLPMNKK IISPAPQLVN EDKPAAYGDF SFNDFLEYIS RNDLTKQRFM DTVKKNKF
Best Arabidopsis Sequence Match ( AT3G60290.1 )
(BLAST)
001: MEETNKSVVN DYFTSAMELT ESGDPHVPTR YILPPSQRPM LGPSIGTSTI NLPVIDLSFL HDPLLRLCVI HEIELACKGF GFFQVINHGI SSAVVKDAQD
101: SATRFFDLPA DEKMHLVSDN FQEPVRYGTS INHSTDRVHY WRDFIKHYSH PLSNWINLWP SNPPCYKEKV GKYAEATHVL HKQLIEAISE SLGLEKNYLQ
201: EEIEEGSQVM AVNCYPACPE PEIALGMPPH SDYGSLTILL QSSEGLQIKD CNNNWVCVPY IEGALIVQLG DQVEVMSNGI YKSVVHRVTV NKDYKRLSFA
301: SLHSLPMHKK ISPATQLVNE NKPAAYGEFS FNDFLDYISR NDITQKRFID TLRKKNL
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JAP7]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.