CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004867.1-P	Field mustard	cytosol	99.72	99.72
AT2G44800.1	Thale cress	cytosol, nucleus, peroxisome, plastid	90.53	91.04
CDY30486	Canola	cytosol, nucleus, peroxisome	87.74	88.48
CDY23457	Canola	cytosol, nucleus, peroxisome	85.79	86.52
CDY56988	Canola	peroxisome	79.11	79.55
CDY42687	Canola	peroxisome	77.72	77.93
PGSC0003DMT400067044	Potato	cytosol	55.71	59.52
KRH40180	Soybean	plastid	56.55	57.67
PGSC0003DMT400092726	Potato	cytosol, peroxisome, plastid	54.6	55.84
Solyc01g090140.1.1	Tomato	plastid	32.03	51.34
PGSC0003DMT400088016	Potato	cytosol	45.96	50.61
CDX70044	Canola	cytosol, nucleus, peroxisome	45.13	44.88
CDY65238	Canola	cytosol, nucleus, peroxisome	45.13	44.88
CDX75020	Canola	cytosol	40.39	39.4
CDX80450	Canola	mitochondrion	35.38	37.24
CDY05412	Canola	mitochondrion	35.38	37.24
CDX88109	Canola	mitochondrion	35.1	36.95
CDY05445	Canola	plastid	35.1	36.95
CDX90761	Canola	plastid	34.54	35.43
CDY14476	Canola	plastid	34.26	34.84
CDY07746	Canola	plastid	34.26	34.84
CDY18399	Canola	plastid	33.43	33.9
CDY34450	Canola	cytosol	32.03	33.63
CDY32234	Canola	cytosol, nucleus, peroxisome	31.75	33.33
CDY68873	Canola	plastid	32.59	33.14
CDX93319	Canola	plastid	32.59	33.14
CDY05103	Canola	cytosol, nucleus, peroxisome	32.31	33.05
CDX86858	Canola	cytosol	31.2	33.04
CDX99548	Canola	cytosol	30.92	32.74
CDX99549	Canola	vacuole	18.94	31.92
CDX99550	Canola	cytosol	30.08	31.67
CDX90759	Canola	cytosol	26.46	31.46
CDY21556	Canola	cytoskeleton, cytosol, peroxisome	29.25	31.25
CDX69931	Canola	cytoskeleton, cytosol, peroxisome	28.97	30.95
CDY69013	Canola	cytosol	26.46	30.94
CDY02966	Canola	cytosol	31.2	30.77
CDX76068	Canola	cytosol	30.92	30.33
CDY48154	Canola	cytosol	25.35	29.84
CDY41522	Canola	cytosol	24.51	29.63
CDY11329	Canola	cytosol	30.64	29.57
CDY39565	Canola	cytosol	25.07	29.51
CDY01001	Canola	cytosol	33.15	29.38
CDX80966	Canola	cytosol	30.36	29.3
CDY04960	Canola	cytosol	30.08	29.03
CDY08545	Canola	cytosol	32.59	28.89
CDY14105	Canola	cytosol, nucleus, peroxisome	30.36	28.39
CDY41520	Canola	cytosol	19.5	28.34
CDX77983	Canola	cytosol	28.13	28.21
CDX81188	Canola	cytosol	25.07	28.12
CDX90656	Canola	cytosol	27.3	28.0
CDX73739	Canola	cytosol	27.86	27.93
CDY39860	Canola	cytosol	23.96	27.83
CDY29008	Canola	cytosol	26.74	27.43
CDY31361	Canola	cytosol	23.68	27.42
CDX94133	Canola	cytosol	25.91	25.98
CDY41286	Canola	cytosol	25.63	25.7
CDY10816	Canola	cytosol	25.63	25.7
CDX97750	Canola	cytosol	15.6	25.34
CDX76765	Canola	cytosol	16.16	24.37
CDX76159	Canola	cytoskeleton, cytosol, peroxisome	19.78	24.23
CDX98776	Canola	cytosol	25.91	23.66
CDX72185	Canola	nucleus	30.92	22.02
CDY31363	Canola	cytosol	23.68	20.14
CDY41521	Canola	cytosol, mitochondrion	1.11	19.05
CDY27251	Canola	nucleus	30.64	17.71

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	GO:A0A078CCU7	EnsemblPlants:CDX74687	ProteinID:CDX74687	ProteinID:CDX74687.1
InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00116640001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF224
SUPFAM:SSF51197	UniParc:UPI0004EDFD70	:	:	:	:

Description

BnaA05g04330D

Coordinates

chrLK031802:+:160237..161848

Molecular Weight (calculated)

40168.8 Da

IEP (calculated)

5.828

GRAVY (calculated)

-0.251

Length

359 amino acids

Sequence
(BLAST)

001: MEETKKSLLD DSFTSAMTLT NSGVPQVPDR YVLPPAQRPA LGSSIGTRDD TTLPVIDLSL LHQPLLRSRA IHEINMACKE FGFFQVINHG IPSSVVKDAL
101: DAATQFFDLP VEEKMLLVSS DVHQPVRYGT SINHSTDKVH YWRDFIKHYS HPLSKWIDMW PSNPPCYKDK VGKYAEATHL LHKQLLEAIS ESLGLEKNYL
201: QEQTEEGSQV IAVNCYPACP EPEVTLGMPP HSDFGSLTIL LQSSEGLQIM DANKNWVCVP YIEGALIVQL GDQVEVMSNG IYKSVIHRVT VNKHVNRLSF
301: ASLHSLPLHK KISPAPELLD GNNAAAYGEF SFNDFLNYIS SNDDFLQERF IDTLKKSSS

Best Arabidopsis Sequence Match ( AT2G44800.1 )
(BLAST)

001: MEETKMSLLD DSFTSAMTLT NSGVPQVPDR YVLPPSQRPA LGSSLGTSET TLPVIDLSLL HQPFLRSLAI HEISMACKEF GFFQVINHGI PSSVVNDALD
101: AATQFFDLPV EEKMLLVSAN VHEPVRYGTS LNHSTDRVHY WRDFIKHYSH PLSKWIDMWP SNPPCYKDKV GKYAEATHLL HKQLIEAISE SLGLEKNYLQ
201: EEIEEGSQVM AVNCYPACPE PEMALGMPPH SDFSSLTILL QSSKGLQIMD CNKNWVCVPY IEGALIVQLG DQVEVMSNGI YKSVIHRVTV NKEVKRLSFA
301: SLHSLPLHKK ISPAPKLVNP NNAPAYGEFS FNDFLNYISS NDFIQERFID TIKKSSS

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IV21]
SUBAcon: [peroxisome,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.