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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • peroxisome 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY11329 Canola cytosol 98.12 98.12
CDY04960 Canola cytosol 88.98 88.98
AT5G05600.1 Thale cress cytosol 88.71 88.95
CDY14105 Canola cytosol, nucleus, peroxisome 89.52 86.72
KRG97722 Soybean cytosol 68.28 70.36
KRH14938 Soybean cytosol 67.47 69.53
KRH31155 Soybean cytosol 67.2 69.25
VIT_13s0067g01020.t01 Wine grape cytosol 66.4 68.8
Solyc03g096050.2.1 Tomato cytosol 64.25 66.95
PGSC0003DMT400031149 Potato cytosol 63.71 66.57
KRH73197 Soybean cytosol 67.47 66.4
CDY08545 Canola cytosol 69.09 63.46
CDX76068 Canola cytosol 61.56 62.57
CDY01001 Canola cytosol 68.01 62.47
CDY02966 Canola cytosol 61.02 62.36
GSMUA_Achr7P15540_001 Banana cytosol 56.99 59.89
GSMUA_Achr6P15610_001 Banana cytosol 56.45 59.66
TraesCS1B01G088600.1 Wheat cytoskeleton, cytosol, peroxisome 54.03 56.15
TraesCS1D01G072700.1 Wheat cytoskeleton, cytosol, peroxisome 53.76 55.87
TraesCS1A01G070200.1 Wheat cytoskeleton, cytosol, peroxisome 53.49 55.59
CDY07746 Canola plastid 52.69 55.52
CDY18399 Canola plastid 52.69 55.37
CDY14476 Canola plastid 52.42 55.24
EES18946 Sorghum cytosol 54.3 55.19
Os01t0832600-01 Rice cytosol 54.3 55.19
HORVU1Hr1G015050.7 Barley cytosol, peroxisome 53.76 55.1
CDX93319 Canola plastid 52.15 54.96
CDY68873 Canola plastid 52.15 54.96
TraesCS3D01G345600.1 Wheat cytosol 55.11 54.23
TraesCS3B01G383900.1 Wheat cytosol 54.3 54.16
TraesCS3A01G351400.2 Wheat cytosol 55.11 54.09
Zm00001d042980_P002 Maize cytosol 54.3 54.01
TraesCS4A01G109200.1 Wheat cytosol 52.96 53.53
EES01705 Sorghum cytosol 55.65 53.35
Os05t0127500-01 Rice cytosol 52.69 53.26
TraesCS4B01G195000.1 Wheat cytosol 52.69 53.26
Zm00001d028744_P001 Maize cytosol 53.49 52.93
HORVU4Hr1G056500.2 Barley cytosol, peroxisome, plastid 52.69 52.83
TraesCS4D01G195700.1 Wheat cytosol 52.15 52.72
Zm00001d035462_P001 Maize cytosol 53.23 51.83
EER92419 Sorghum cytosol 52.69 51.17
Os03t0289800-01 Rice cytosol 52.69 50.65
TraesCS4B01G328300.1 Wheat cytosol 36.29 50.37
Zm00001d047744_P001 Maize mitochondrion 53.49 48.89
HORVU3Hr1G087570.4 Barley cytosol, peroxisome, plastid 53.49 48.66
CDX72185 Canola nucleus 60.48 44.64
Zm00001d012456_P004 Maize plastid 54.84 43.22
CDY48154 Canola cytosol 31.45 38.36
CDY21556 Canola cytoskeleton, cytosol, peroxisome 34.14 37.8
CDY32234 Canola cytosol, nucleus, peroxisome 34.68 37.72
CDX69931 Canola cytoskeleton, cytosol, peroxisome 33.87 37.5
CDY34450 Canola cytosol 34.41 37.43
CDY39565 Canola cytosol 30.65 37.38
CDX90761 Canola plastid 34.14 36.29
CDY27251 Canola nucleus 59.68 35.75
CDX80450 Canola mitochondrion 31.99 34.9
CDX88109 Canola mitochondrion 31.72 34.6
CDY69013 Canola cytosol 28.49 34.53
CDX97750 Canola cytosol 20.43 34.39
CDY41286 Canola cytosol 33.06 34.36
CDX99549 Canola vacuole 19.62 34.27
CDY05103 Canola cytosol, nucleus, peroxisome 32.26 34.19
CDY05412 Canola mitochondrion 31.18 34.02
CDY05445 Canola plastid 31.18 34.02
CDY10816 Canola cytosol 32.53 33.8
CDY41522 Canola cytosol 26.88 33.67
CDY41520 Canola cytosol 22.31 33.6
CDX75020 Canola cytosol 33.06 33.42
CDY39860 Canola cytosol 27.69 33.33
CDX86858 Canola cytosol 30.11 33.04
CDX94133 Canola cytosol 31.72 32.96
CDY31361 Canola cytosol 27.42 32.9
CDX90759 Canola cytosol 26.61 32.78
CDX99548 Canola cytosol 29.84 32.74
CDX81188 Canola cytosol 27.96 32.5
CDY56988 Canola peroxisome 31.18 32.49
CDX73739 Canola cytosol 30.91 32.12
CDY42687 Canola peroxisome 30.91 32.12
CDX77983 Canola cytosol 30.65 31.84
CDY23457 Canola cytosol, nucleus, peroxisome 30.38 31.74
CDY30486 Canola cytosol, nucleus, peroxisome 30.38 31.74
CDX90656 Canola cytosol 29.57 31.43
CDY29008 Canola cytosol 29.3 31.14
CDX99550 Canola cytosol 28.23 30.79
CDX74687 Canola cytosol 29.3 30.36
CDX98776 Canola cytosol 31.99 30.28
CDX70044 Canola cytosol, nucleus, peroxisome 27.96 28.81
CDY65238 Canola cytosol, nucleus, peroxisome 27.69 28.53
CDX76159 Canola cytoskeleton, cytosol, peroxisome 21.77 27.65
CDX76765 Canola cytosol 16.13 25.21
CDY31363 Canola cytosol 27.96 24.64
CDY41521 Canola cytosol, mitochondrion 0.27 4.76
Protein Annotations
Gene3D:2.60.120.330MapMan:50.1.13GO:A0A078CUY8EnsemblPlants:CDX80966ProteinID:CDX80966ProteinID:CDX80966.1
InterPro:DIOX_NGO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0016491
GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00134389001InterPro:IPNS-likeInterPro:IPR005123InterPro:IPR027443InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171PFAM:PF14226PRINTS:PR00682PFscan:PS51471PANTHER:PTHR10209PANTHER:PTHR10209:SF134
SUPFAM:SSF51197UniParc:UPI0004EEF6DA::::
Description
BnaC03g02200D
Coordinates
chrLK031823:+:1049928..1052338
Molecular Weight (calculated)
42450.7 Da
IEP (calculated)
6.243
GRAVY (calculated)
-0.470
Length
372 amino acids
Sequence
(BLAST)
001: MTKNKKEVNI ETRKGSTMDE WPEPIVRVQS LAESNLSSLP DRYIKPASQR PTTIEEAPAA TNIPIIDLEG LFLEDGSPDE AIMAQISEAC REWGFFQVLN
101: HGVRPELMDA ARENWREFFH LPVNEKETHR NSPKTYEGYG SRLGVEKGAI LDWSDYYFLH LLPPHLKDFN KWPSFPPTIR EVIDEYGKEV VNLCGRIMKV
201: LSLNLGLKEE KFQDAFGGEN IGACLRVNYY PKCPRPELAL GLSSHSDPGG MTILLPDDQV FGLQVRKNDM WITVKPHPHA FIVNIGDQIQ ILSNSAYKSV
301: EHRVIVNSEK ERVSLAFFYN PKSDIPIQPL QELVFTHNPP LYPPMTFDQY RLFIRTQGPQ GKSHVESHVS PR
Best Arabidopsis Sequence Match ( AT5G05600.1 )
(BLAST)
001: MNKNKIDVKI ETKKGSMDEW PEPIVRVQSL AESNLSSLPD RYIKPASLRP TTTEDAPTAT NIPIIDLEGL FSEEGLSDDV IMARISEACR GWGFFQVVNH
101: GVKPELMDAA RENWREFFHM PVNAKETYSN SPRTYEGYGS RLGVEKGASL DWSDYYFLHL LPHHLKDFNK WPSFPPTIRE VIDEYGEELV KLSGRIMRVL
201: STNLGLKEDK FQEAFGGENI GACLRVNYYP KCPRPELALG LSPHSDPGGM TILLPDDQVF GLQVRKDDTW ITVKPHPHAF IVNIGDQIQI LSNSTYKSVE
301: HRVIVNSDKE RVSLAFFYNP KSDIPIQPLQ ELVSTHNPPL YPPMTFDQYR LFIRTQGPQG KSHVESHISP R
Arabidopsis Description
Probable 2-oxoglutarate-dependent dioxygenase At5g05600 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFF6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.