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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d028744_P001 Maize cytosol 89.56 91.22
Zm00001d047744_P001 Maize mitochondrion 87.47 82.31
TraesCS4B01G195000.1 Wheat cytosol 78.85 82.07
TraesCS4A01G109200.1 Wheat cytosol 78.59 81.79
TraesCS4D01G195700.1 Wheat cytosol 78.33 81.52
HORVU4Hr1G056500.2 Barley cytosol, peroxisome, plastid 77.55 80.05
Os03t0289800-01 Rice cytosol 77.28 76.49
GSMUA_Achr6P15610_001 Banana cytosol 59.53 64.77
EES18946 Sorghum cytosol 61.1 63.93
KRH38051 Soybean cytosol, peroxisome 31.85 62.89
GSMUA_Achr7P15540_001 Banana cytosol 56.66 61.3
PGSC0003DMT400049193 Potato cytosol, mitochondrion, peroxisome 28.46 59.56
Bra034168.1-P Field mustard cytosol 44.13 58.48
KRH14938 Soybean cytosol 54.83 58.17
KRG97722 Soybean cytosol 53.79 57.06
VIT_13s0067g01020.t01 Wine grape cytosol 53.0 56.55
KRH73197 Soybean cytosol 55.61 56.35
KRH31155 Soybean cytosol 53.0 56.23
VIT_08s0105g00380.t01 Wine grape cytosol 52.48 56.15
Solyc03g096050.2.1 Tomato cytosol 51.7 55.46
PGSC0003DMT400031149 Potato cytosol 51.44 55.34
KRH00254 Soybean plastid 50.13 55.17
KRH65721 Soybean cytosol 53.26 54.69
Bra028752.1-P Field mustard cytosol 52.48 54.03
CDY04960 Canola cytosol 52.48 54.03
Solyc10g076660.1.1 Tomato cytosol 51.17 53.7
CDY11329 Canola cytosol 51.96 53.49
Bra005860.1-P Field mustard cytosol 51.96 53.49
AT5G05600.1 Thale cress cytosol 51.7 53.37
EES01705 Sorghum cytosol 53.79 53.09
PGSC0003DMT400049192 Potato cytosol 50.65 53.01
CDX80966 Canola cytosol 51.17 52.69
KRH49391 Soybean cytosol 52.48 52.62
CDY68873 Canola plastid 48.3 52.41
CDX93319 Canola plastid 48.3 52.41
CDY14105 Canola cytosol, nucleus, peroxisome 52.48 52.34
Bra017132.1-P Field mustard plastid 48.3 52.26
CDY18399 Canola plastid 48.3 52.26
Bra014716.1-P Field mustard cytosol 49.87 52.19
Bra000045.1-P Field mustard plastid 48.04 52.12
CDY07746 Canola plastid 48.04 52.12
AT3G55970.1 Thale cress cytosol 49.35 52.07
CDY02966 Canola cytosol 49.35 51.92
CDX76068 Canola cytosol 49.61 51.91
AT2G38240.1 Thale cress plastid 47.78 51.84
CDY14476 Canola plastid 47.78 51.84
Solyc10g085190.1.1 Tomato cytosol 47.0 49.86
PGSC0003DMT400028828 Potato cytosol 46.48 49.44
Solyc10g076670.1.1 Tomato cytosol 28.72 49.33
AT3G11180.2 Thale cress cytosol 50.91 48.39
Bra034861.1-P Field mustard cytosol 48.83 46.17
CDY08545 Canola cytosol 48.83 46.17
CDY01001 Canola cytosol 48.56 45.93
EES15500 Sorghum cytosol 31.85 45.19
EER92960 Sorghum cytosol 34.73 39.58
EER94585 Sorghum cytosol 32.9 37.5
CDX72185 Canola nucleus 48.56 36.9
EES07584 Sorghum cytosol 31.59 36.45
EER87904 Sorghum plastid 32.38 35.94
KXG26978 Sorghum cytosol 31.59 35.28
EES00073 Sorghum cytosol 27.42 34.09
EER95911 Sorghum cytosol 29.24 33.43
EES12710 Sorghum cytosol, peroxisome, plastid 30.55 33.33
EES06032 Sorghum cytosol 30.03 32.76
KXG23558 Sorghum cytosol 28.46 31.87
EES15170 Sorghum cytosol 33.42 31.07
Bra007204.1-P Field mustard cytosol 48.83 30.11
EES04312 Sorghum cytosol 31.33 30.08
EES08336 Sorghum cytosol 31.07 30.05
CDY27251 Canola nucleus 48.3 29.79
EES13031 Sorghum cytosol 28.46 29.14
EER96378 Sorghum cytosol 29.77 28.93
KXG27374 Sorghum plastid 24.28 27.93
EES16047 Sorghum cytosol 24.8 27.86
KXG23555 Sorghum cytosol 24.28 27.6
EES16044 Sorghum cytosol 24.28 27.6
OQU82532 Sorghum cytosol 22.98 27.41
KXG27349 Sorghum plastid 28.72 25.52
OQU80974 Sorghum cytosol, mitochondrion, peroxisome, plastid 25.07 25.2
Protein Annotations
Gene3D:2.60.120.330MapMan:50.1.13EntrezGene:8084036UniProt:C5WNJ8InterPro:DIOX_NEnsemblPlants:EER92419
ProteinID:EER92419ProteinID:EER92419.1GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0008150
GO:GO:0008152GO:GO:0016491GO:GO:0046872GO:GO:0055114InterPro:IPNS-likeInterPro:IPR005123
InterPro:IPR027443InterPro:Oxoglu/Fe-dep_dioxygenasePFAM:PF03171PFAM:PF14226PRINTS:PR00682PFscan:PS51471
PANTHER:PTHR10209PANTHER:PTHR10209:SF92EnsemblPlantsGene:SORBI_3001G407800SUPFAM:SSF51197UniParc:UPI0001A82C09RefSeq:XP_002465421.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr1:+:69193002..69197733
Molecular Weight (calculated)
40890.5 Da
IEP (calculated)
6.619
GRAVY (calculated)
-0.199
Length
383 amino acids
Sequence
(BLAST)
001: MTSCFNGGAG WPEPVVRVQH VSDTCGDTIP ERYVKPPSER PCLSPAAASS GGVGGGGGGG PNIPVVDLSM LDVDATSRAV AAACREWGFF QAVNHGVRPE
101: LLRSGRAAWR GFFRQPAVVR ERYANSPATY EGYGSRLGTA KGGPLDWGDY YFLHLLPASL KSHEKWPSLP SSLRGTTEEY GEEVLQLCRR VMRLLSSGLG
201: LEAGRLQAAF GGEGGEGACL RVNLYPRCPQ PELTLGVAGH SDPGGMTMLL VDDHVKGLQV RSPDGQWIIV DPVPDAFIVN VGDQIQVLSN ASYKSVEHRV
301: TVSAAEDRLS MAFFYNPRSD LPIAPMPELV GPGRPALYPE MTFDEYRVFI RQRGLAGKAQ LQSLQANQTA AAAAAAGSSS TCS
Best Arabidopsis Sequence Match ( AT3G11180.1 )
(BLAST)
001: MNNLDEIKIE SKTCLNDQEQ EVKIDNMHMS DQDKNKIEIK NKSGLGEKWP EPIVRVQSLA ESNLTSLPDR YIKPPSQRPQ TTIIDHQPEV ADINIPIIDL
101: DSLFSGNEDD KKRISEACRE WGFFQVINHG VKPELMDAAR ETWKSFFNLP VEAKEVYSNS PRTYEGYGSR LGVEKGAILD WNDYYYLHFL PLALKDFNKW
201: PSLPSNIREM NDEYGKELVK LGGRLMTILS SNLGLRAEQL QEAFGGEDVG ACLRVNYYPK CPQPELALGL SPHSDPGGMT ILLPDDQVVG LQVRHGDTWI
301: TVNPLRHAFI VNIGDQIQIL SNSKYKSVEH RVIVNSEKER VSLAFFYNPK SDIPIQPMQQ LVTSTMPPLY PPMTFDQYRL FIRTQGPRGK SHVESHISPR
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J670]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.