CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol

Predictor Summary:

plastid 4
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G048400.1	Wheat	cytosol	59.06	66.18
TraesCS5D01G058700.2	Wheat	cytosol	60.89	61.54
HORVU5Hr1G011540.3	Barley	cytosol	60.37	60.05
TraesCS5B01G053400.2	Wheat	cytosol	60.89	58.73
HORVU3Hr1G077080.2	Barley	cytosol, peroxisome, plastid	54.33	57.66
TraesCS3B01G351600.1	Wheat	cytosol	53.02	56.27
TraesCS3A01G315300.1	Wheat	cytosol, peroxisome, plastid	53.02	56.27
TraesCS3D01G316200.1	Wheat	cytosol	53.28	50.37
GSMUA_Achr9P15020_001	Banana	cytosol	39.11	42.45
KRH53489	Soybean	cytosol	33.86	35.64
VIT_18s0001g06690.t01	Wine grape	cytosol	30.97	35.12
Solyc01g105650.2.1	Tomato	cytosol	32.28	34.55
EER92960	Sorghum	cytosol	29.66	33.63
EER94585	Sorghum	cytosol	29.4	33.33
KXG26978	Sorghum	cytosol	27.56	30.61
EER95911	Sorghum	cytosol	26.77	30.45
EER87904	Sorghum	plastid	27.03	29.86
EES12710	Sorghum	cytosol, peroxisome, plastid	27.03	29.34
PGSC0003DMT400083728	Potato	cytosol	12.6	28.74
EES07584	Sorghum	cytosol	24.15	27.71
KXG27374	Sorghum	plastid	23.88	27.33
EES00073	Sorghum	cytosol	22.05	27.27
EER96378	Sorghum	cytosol	28.08	27.16
EES01705	Sorghum	cytosol	27.56	27.06
EES18946	Sorghum	cytosol	25.98	27.05
EES08336	Sorghum	cytosol	28.08	27.02
EES16044	Sorghum	cytosol	23.88	27.0
KXG23558	Sorghum	cytosol	24.15	26.9
KXG23555	Sorghum	cytosol	23.62	26.71
EES16047	Sorghum	cytosol	23.62	26.39
EES15170	Sorghum	cytosol	28.35	26.21
EES06032	Sorghum	cytosol	23.88	25.93
OQU82532	Sorghum	cytosol	21.78	25.86
EER92419	Sorghum	cytosol	25.2	25.07
EES15500	Sorghum	cytosol	17.59	24.81
EES04312	Sorghum	cytosol	24.93	23.81
EES13031	Sorghum	cytosol	23.1	23.53
KXG27349	Sorghum	plastid	23.1	20.42
Zm00001d042655_P001	Maize	cytosol	1.57	5.31

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	UniProt:A0A1Z5RB23	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	EnsemblPlants:OQU80974	ProteinID:OQU80974	ProteinID:OQU80974.1
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF369
EnsemblPlantsGene:SORBI_3007G216201	SUPFAM:SSF51197	UniParc:UPI000B8BAF69	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr7:-:64464875..64467400

Molecular Weight (calculated)

40365.1 Da

IEP (calculated)

5.564

GRAVY (calculated)

-0.051

Length

381 amino acids

Sequence
(BLAST)

001: MCMNTGAPRQ TPAPATSLPR LALLQIVVSD PNPCTALMAG PSAYHSTTVP CTHGGADPAV PDSGTGIPVV DFDALVNGAA EQRAQAVRDV GRACQDWGFF
101: MVVNHGVSED LKEAFMASCE ELFSSPSEEK AAYLEAGPMA PVRVGSGFYA AVDGARYCRD YVKMFAHPEL HCPAKLIRAE VATEYAATTR RLLLSLATAV
201: SESLGLAGGR VAEAMRLESS SPNRYPAPCT GQGGDDDVGV PALGLPAHSD HGFLTLLFQN GVDGLQVHHG GRWLLATPLP GAFFVIAGDQ LEIVSNGRYK
301: GVLHRAVVGG ERARMSAVSM ISPCLDAVVE PVPELAVDGQ GLEFRGVRYR DYMEHQQSNR LNGKAALDIA RVQRAVAEPD N

Best Arabidopsis Sequence Match ( AT2G36690.1 )
(BLAST)

001: MSPSMIAPVM EEENKKYQKG VKHLCENGLT KVPTKYIWPE PDRPILTKSD KLIKPNKNLK LPLIDFAELL GPNRPHVLRT IAEACKTYGF FQVVNHGMEG
101: DVSKNMIDVC KRFFELPYEE RSKYMSSDMS APVRYGTSFN QIKDNVFCWR DFLKLYAHPL PDYLPHWPSS PSDFRSSAAT YAKETKEMFE MMVKAILESL
201: EIDGSDEAAK ELEEGSQVVV VNCYPPCPEP ELTLGMPPHS DYGFLTLLLQ DEVEGLQILY RDEWVTVDPI PGSFVVNVGD HLEIFSNGRY KSVLHRVLVN
301: STKPRISVAS LHSFPLTSVV KPSPKLVDKH NPSQYMDTDF TTFLQYITSR EPKWKNFLES RKIHHV

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4INZ9]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.