CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 3
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	plastid
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EES00073
EES07584

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G51240.1	EES00073	AT5G08640.1	18467451
AT3G51240.1	EES07584	AT5G08640.1	18467451

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d001960_P001	Maize	plastid	90.64	92.62
KXG27349	Sorghum	plastid	94.92	82.37
TraesCS2B01G613300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	75.67	81.09
TraesCS2A01G493500.1	Wheat	golgi	81.55	80.9
TraesCS2B01G521500.1	Wheat	golgi	81.28	80.42
TraesCS2D01G493400.1	Wheat	golgi, nucleus	80.75	79.89
AT3G51240.1	Thale cress	cytosol	73.26	76.54
VIT_18s0001g14310.t01	Wine grape	cytosol	72.99	76.26
CDX77983	Canola	cytosol	72.99	76.26
Bra036828.1-P	Field mustard	cytosol	72.73	75.98
VIT_04s0023g03370.t01	Wine grape	cytosol	73.53	75.76
CDX73739	Canola	cytosol	72.19	75.42
GSMUA_Achr2P02770_001	Banana	cytosol	74.33	74.73
CDX90656	Canola	cytosol	69.52	74.29
PGSC0003DMT400009175	Potato	cytosol	71.39	74.17
GSMUA_Achr7P16780_001	Banana	cytosol	73.8	73.99
Solyc02g083860.2.1	Tomato	cytosol	71.39	73.76
CDY29008	Canola	cytosol	68.18	72.86
Bra012862.1-P	Field mustard	cytosol	67.91	72.57
KRH69784	Soybean	cytosol	70.86	70.67
KRH69787	Soybean	nucleus	69.79	69.41
KRH08080	Soybean	cytosol	68.98	69.35
KRH76658	Soybean	cytosol	67.65	69.32
HORVU2Hr1G110130.3	Barley	mitochondrion	80.21	67.57
CDX76765	Canola	cytosol	37.17	58.4
Bra014831.1-P	Field mustard	cytosol	48.93	56.83
Os04t0662600-00	Rice	mitochondrion, peroxisome	61.5	56.65
CDX76159	Canola	cytoskeleton, cytosol, peroxisome	43.32	55.29
EER92960	Sorghum	cytosol	36.1	40.18
EER95911	Sorghum	cytosol	32.62	36.42
EER94585	Sorghum	cytosol	31.55	35.12
EER87904	Sorghum	plastid	31.55	34.2
EES12710	Sorghum	cytosol, peroxisome, plastid	32.09	34.19
KXG26978	Sorghum	cytosol	30.48	33.24
EES00073	Sorghum	cytosol	27.01	32.79
EES07584	Sorghum	cytosol	28.88	32.53
EES18946	Sorghum	cytosol	31.82	32.51
EES01705	Sorghum	cytosol	33.69	32.47
KXG23558	Sorghum	cytosol	29.41	32.16
OQU82532	Sorghum	cytosol	25.67	29.91
EES15500	Sorghum	cytosol	21.39	29.63
EER96378	Sorghum	cytosol	30.75	29.19
EER92419	Sorghum	cytosol	29.14	28.46
EES15170	Sorghum	cytosol	31.02	28.16
EES06032	Sorghum	cytosol	26.2	27.92
EES08336	Sorghum	cytosol	29.41	27.78
Os08t0480200-01	Rice	cytosol	24.87	27.6
EES16044	Sorghum	cytosol	24.6	27.3
KXG23555	Sorghum	cytosol	24.6	27.3
EES16047	Sorghum	cytosol	24.6	26.98
KXG27374	Sorghum	plastid	23.26	26.13
EES04312	Sorghum	cytosol	26.74	25.06
OQU80974	Sorghum	cytosol, mitochondrion, peroxisome, plastid	23.53	23.1
Os08t0480100-01	Rice	cytosol, endoplasmic reticulum, plastid	0.27	0.16

Protein Annotations

Gene3D:2.60.120.330	EntrezGene:8082549	MapMan:9.2.2.4.3	UniProt:C5Y9X8	InterPro:DIOX_N	EnsemblPlants:EES13031
ProteinID:EES13031	ProteinID:EES13031.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009416	GO:GO:0009628	GO:GO:0009813	GO:GO:0016491
GO:GO:0045486	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF137
EnsemblPlantsGene:SORBI_3006G253900	SUPFAM:SSF51197	UniParc:UPI0001A87502	RefSeq:XP_002448703.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:-:59156764..59158685

Molecular Weight (calculated)

40928.0 Da

IEP (calculated)

6.188

GRAVY (calculated)

-0.180

Length

374 amino acids

Sequence
(BLAST)

001: MLAPVSIGAV PFLPTAAAGE STLRASFVRD EDERPKVPHD RFSDEVPVVS LEGIDGGGAR RAEIRARVAA ACEDWGIFQV VDHGVDAALV AEMARLARDF
101: FALPAEDKLR FDMSGGKKGG FIVSSHLQGE AVQDWREIVT YFSYPVKSRD YSRWPDKPAA WRAVVERYSE QLMGLACKLL GVLSEAMGLE TDALAKACVD
201: MDQKVVVNFY PKCPQPDLTL GLKRHTDPGT ITLLLQDLVG GLQATRDGGR TWITVQPLEG AFVVNLGDHG HLLSNGRFKN ADHQAVVNSE CSRLSVATFQ
301: NPAPDATVYP LAVRDGEAPI LDQPITFAEM YRRKMARDIE LAKLKKQAKA EKQLQQSGKE FAVANTKPLD VILA

Best Arabidopsis Sequence Match ( AT3G51240.1 )
(BLAST)

001: MAPGTLTELA GESKLNSKFV RDEDERPKVA YNVFSDEIPV ISLAGIDDVD GKRGEICRQI VEACENWGIF QVVDHGVDTN LVADMTRLAR DFFALPPEDK
101: LRFDMSGGKK GGFIVSSHLQ GEAVQDWREI VTYFSYPVRN RDYSRWPDKP EGWVKVTEEY SERLMSLACK LLEVLSEAMG LEKESLTNAC VDMDQKIVVN
201: YYPKCPQPDL TLGLKRHTDP GTITLLLQDQ VGGLQATRDN GKTWITVQPV EGAFVVNLGD HGHFLSNGRF KNADHQAVVN SNSSRLSIAT FQNPAPDATV
301: YPLKVREGEK AILEEPITFA EMYKRKMGRD LELARLKKLA KEERDHKEVD KPVDQIFA

Arabidopsis Description

F3HNaringenin,2-oxoglutarate 3-dioxygenase [Source:UniProtKB/Swiss-Prot;Acc:Q9S818]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.