Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX73739 | Canola | cytosol | 93.3 | 93.3 |
| CDX77983 | Canola | cytosol | 93.3 | 93.3 |
| Bra036828.1-P | Field mustard | cytosol | 93.02 | 93.02 |
| CDX90656 | Canola | cytosol | 88.83 | 90.86 |
| CDY29008 | Canola | cytosol | 88.27 | 90.29 |
| Bra012862.1-P | Field mustard | cytosol | 87.43 | 89.43 |
| VIT_04s0023g03370.t01 | Wine grape | cytosol | 84.64 | 83.47 |
| VIT_18s0001g14310.t01 | Wine grape | cytosol | 82.68 | 82.68 |
| Solyc02g083860.2.1 | Tomato | cytosol | 81.84 | 80.94 |
| PGSC0003DMT400009175 | Potato | cytosol | 81.28 | 80.83 |
| KRH69784 | Soybean | cytosol | 82.4 | 78.67 |
| GSMUA_Achr2P02770_001 | Banana | cytosol | 81.28 | 78.23 |
| KRH69787 | Soybean | nucleus | 81.84 | 77.93 |
| GSMUA_Achr7P16780_001 | Banana | cytosol | 79.61 | 76.41 |
| KRH08080 | Soybean | cytosol | 78.49 | 75.54 |
| Zm00001d001960_P001 | Maize | plastid | 76.82 | 75.14 |
| TraesCS2B01G613300.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 71.79 | 73.64 |
| EES13031 | Sorghum | cytosol | 76.54 | 73.26 |
| TraesCS2B01G521500.1 | Wheat | golgi | 75.98 | 71.96 |
| TraesCS2A01G493500.1 | Wheat | golgi | 75.7 | 71.88 |
| TraesCS2D01G493400.1 | Wheat | golgi, nucleus | 75.42 | 71.43 |
| Bra014831.1-P | Field mustard | cytosol | 61.73 | 68.63 |
| CDX76159 | Canola | cytoskeleton, cytosol, peroxisome | 55.03 | 67.24 |
| CDX76765 | Canola | cytosol | 44.69 | 67.23 |
| KXG27349 | Sorghum | plastid | 76.54 | 63.57 |
| HORVU2Hr1G110130.3 | Barley | mitochondrion | 74.3 | 59.91 |
| Os04t0662600-00 | Rice | mitochondrion, peroxisome | 58.94 | 51.97 |
| AT4G10490.1 | Thale cress | cytosol | 34.08 | 35.06 |
| AT5G24530.1 | Thale cress | mitochondrion | 32.68 | 34.31 |
| AT4G10500.1 | Thale cress | plastid | 32.96 | 33.81 |
| AT2G38240.1 | Thale cress | plastid | 32.68 | 33.14 |
| AT5G05600.1 | Thale cress | cytosol | 32.96 | 31.81 |
| AT3G55970.1 | Thale cress | cytosol | 31.01 | 30.58 |
| AT5G08640.1 | Thale cress | cytosol | 28.21 | 30.06 |
| AT4G16330.2 | Thale cress | plastid | 30.45 | 29.95 |
| AT3G11180.2 | Thale cress | cytosol | 32.4 | 28.78 |
| AT5G63595.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 22.07 | 28.32 |
| AT5G63590.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 24.3 | 28.25 |
| AT4G22880.2 | Thale cress | cytosol | 27.93 | 28.09 |
| AT5G63600.2 | Thale cress | cytosol | 25.14 | 27.61 |
| AT2G36690.1 | Thale cress | cytosol, nucleus, peroxisome | 28.21 | 27.6 |
| AT5G63580.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 18.99 | 27.2 |
| AT3G60290.1 | Thale cress | cytosol, nucleus, peroxisome | 26.82 | 26.89 |
| Os08t0480200-01 | Rice | cytosol | 25.14 | 26.71 |
| AT5G43935.1 | Thale cress | cytosol | 21.51 | 26.28 |
| AT2G44800.1 | Thale cress | cytosol, nucleus, peroxisome, plastid | 25.98 | 26.05 |
| AT5G07480.1 | Thale cress | cytosol | 23.74 | 23.88 |
| Os08t0480100-01 | Rice | cytosol, endoplasmic reticulum, plastid | 0.56 | 0.32 |
Protein Annotations
| Gene3D:2.60.120.330 | EntrezGene:824287 | MapMan:9.2.2.4.3 | ProteinID:AAC49176.1 | ProteinID:AAC68584.1 | ProteinID:AAC68585.1 |
| ProteinID:AEE78766.1 | ProteinID:AEE78767.1 | EMBL:AF428335 | ArrayExpress:AT3G51240 | EnsemblPlantsGene:AT3G51240 | RefSeq:AT3G51240 |
| TAIR:AT3G51240 | RefSeq:AT3G51240-TAIR-G | EnsemblPlants:AT3G51240.1 | TAIR:AT3G51240.1 | EMBL:AY058886 | EMBL:AY087559 |
| EMBL:AY116957 | Unigene:At.75596 | ProteinID:CAB62646.1 | ProteinID:CAC26942.1 | ProteinID:CAC26943.1 | ProteinID:CAC26944.1 |
| ProteinID:CAC26945.1 | ProteinID:CAC26946.1 | ProteinID:CAC26947.1 | ProteinID:CAC26948.1 | ProteinID:CAC26949.1 | ProteinID:CAC26950.1 |
| ProteinID:CAC26951.1 | ProteinID:CAC26952.1 | ProteinID:CAC26953.1 | ProteinID:CAC26954.1 | ProteinID:CAC26955.1 | ProteinID:CAC26956.1 |
| ProteinID:CAC26957.1 | ProteinID:CAC26958.1 | ProteinID:CAC26959.1 | ProteinID:CAC26960.1 | ProteinID:CAC26961.1 | InterPro:DIOX_N |
| Symbol:F3H | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009813 | GO:GO:0010224 |
| GO:GO:0016491 | GO:GO:0030246 | GO:GO:0031418 | GO:GO:0045486 | GO:GO:0046872 | GO:GO:0051213 |
| GO:GO:0055114 | InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | RefSeq:NP_001190050.1 | RefSeq:NP_190692.1 |
| InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF137 | UniProt:Q9S818 |
| SUPFAM:SSF51197 | UniParc:UPI000004882F | SEG:seg | : | : | : |
Description
F3HNaringenin,2-oxoglutarate 3-dioxygenase [Source:UniProtKB/Swiss-Prot;Acc:Q9S818]
Coordinates
chr3:+:19025192..19026872
Molecular Weight (calculated)
40277.9 Da
IEP (calculated)
5.106
GRAVY (calculated)
-0.448
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPGTLTELA GESKLNSKFV RDEDERPKVA YNVFSDEIPV ISLAGIDDVD GKRGEICRQI VEACENWGIF QVVDHGVDTN LVADMTRLAR DFFALPPEDK
101: LRFDMSGGKK GGFIVSSHLQ GEAVQDWREI VTYFSYPVRN RDYSRWPDKP EGWVKVTEEY SERLMSLACK LLEVLSEAMG LEKESLTNAC VDMDQKIVVN
201: YYPKCPQPDL TLGLKRHTDP GTITLLLQDQ VGGLQATRDN GKTWITVQPV EGAFVVNLGD HGHFLSNGRF KNADHQAVVN SNSSRLSIAT FQNPAPDATV
301: YPLKVREGEK AILEEPITFA EMYKRKMGRD LELARLKKLA KEERDHKEVD KPVDQIFA
101: LRFDMSGGKK GGFIVSSHLQ GEAVQDWREI VTYFSYPVRN RDYSRWPDKP EGWVKVTEEY SERLMSLACK LLEVLSEAMG LEKESLTNAC VDMDQKIVVN
201: YYPKCPQPDL TLGLKRHTDP GTITLLLQDQ VGGLQATRDN GKTWITVQPV EGAFVVNLGD HGHFLSNGRF KNADHQAVVN SNSSRLSIAT FQNPAPDATV
301: YPLKVREGEK AILEEPITFA EMYKRKMGRD LELARLKKLA KEERDHKEVD KPVDQIFA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.