Factsheet for VIT_18s0001g14310.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
peroxisome 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_18s0001g03470.t01
VIT_18s0001g03490.t01
VIT_18s0001g03510.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G51240.1	VIT_18s0001g03470.t01	AT5G08640.1	18467451
AT3G51240.1	VIT_18s0001g03490.t01	AT5G08640.1	18467451
AT3G51240.1	VIT_18s0001g03510.t01	AT5G08640.1	18467451

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0023g03370.t01	Wine grape	cytosol	89.66	88.43
PGSC0003DMT400009175	Potato	cytosol	85.2	84.72
Solyc02g083860.2.1	Tomato	cytosol	84.92	83.98
CDX77983	Canola	cytosol	82.96	82.96
AT3G51240.1	Thale cress	cytosol	82.68	82.68
Bra036828.1-P	Field mustard	cytosol	82.68	82.68
CDX73739	Canola	cytosol	82.4	82.4
CDX90656	Canola	cytosol	80.45	82.29
GSMUA_Achr2P02770_001	Banana	cytosol	84.08	80.91
CDY29008	Canola	cytosol	79.05	80.86
Bra012862.1-P	Field mustard	cytosol	78.77	80.57
GSMUA_Achr7P16780_001	Banana	cytosol	83.52	80.16
KRH76658	Soybean	cytosol	79.05	77.53
Zm00001d001960_P001	Maize	plastid	76.26	74.59
TraesCS2B01G613300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	72.07	73.93
TraesCS2B01G521500.1	Wheat	golgi	77.09	73.02
EES13031	Sorghum	cytosol	76.26	72.99
TraesCS2A01G493500.1	Wheat	golgi	76.82	72.94
TraesCS2D01G493400.1	Wheat	golgi, nucleus	76.54	72.49
KXG27349	Sorghum	plastid	77.09	64.04
CDX76765	Canola	cytosol	41.62	62.6
Bra014831.1-P	Field mustard	cytosol	55.03	61.18
HORVU2Hr1G110130.3	Barley	mitochondrion	75.42	60.81
CDX76159	Canola	cytoskeleton, cytosol, peroxisome	49.44	60.41
Os04t0662600-00	Rice	mitochondrion, peroxisome	60.61	53.45
VIT_16s0098g00860.t01	Wine grape	cytosol, peroxisome, plastid	34.64	36.69
VIT_13s0047g00210.t01	Wine grape	cytosol	33.24	35.31
VIT_13s0067g01020.t01	Wine grape	cytosol	34.92	34.82
VIT_02s0025g02970.t01	Wine grape	cytosol	33.52	34.48
VIT_15s0048g02430.t01	Wine grape	cytosol	32.96	34.3
VIT_02s0025g02960.t01	Wine grape	cytosol	32.96	33.91
VIT_18s0001g03430.t01	Wine grape	cytosol	31.28	33.73
VIT_03s0017g02350.t01	Wine grape	cytosol	32.96	33.24
VIT_08s0105g00380.t01	Wine grape	cytosol	32.68	32.68
VIT_18s0001g03470.t01	Wine grape	cytosol	28.77	31.99
VIT_16s0013g00730.t01	Wine grape	cytosol	17.6	31.5
VIT_07s0005g03150.t01	Wine grape	cytosol, peroxisome, plastid	29.05	30.5
VIT_08s0007g04540.t01	Wine grape	cytosol	31.84	30.24
VIT_18s0001g03490.t01	Wine grape	cytosol	28.21	30.15
VIT_00s0250g00090.t01	Wine grape	cytosol	31.01	29.68
VIT_02s0025g04720.t01	Wine grape	cytosol, peroxisome, plastid	29.05	29.3
VIT_03s0017g00620.t01	Wine grape	cytosol	28.77	29.26
VIT_18s0001g06690.t01	Wine grape	cytosol	26.54	28.27
Os08t0480200-01	Rice	cytosol	26.26	27.89
VIT_16s0013g00740.t01	Wine grape	cytosol, nucleus, peroxisome, plastid	27.09	27.32
VIT_03s0017g00710.t01	Wine grape	plastid	24.58	25.36
VIT_03s0017g00830.t01	Wine grape	plastid	26.26	17.34
VIT_18s0001g03510.t01	Wine grape	cytosol	27.93	14.71
Os08t0480100-01	Rice	cytosol, endoplasmic reticulum, plastid	0.84	0.48

Protein Annotations

EntrezGene:100253950	wikigene:100253950	Gene3D:2.60.120.330	MapMan:9.2.2.4.3	UniProt:A5ANR7	ProteinID:ADP07936
ProteinID:ADP07936.1	EMBL:AM430949	ProteinID:CAN80262	ProteinID:CAN80262.1	ProteinID:CCB46039	ProteinID:CCB46039.1
InterPro:DIOX_N	EMBL:FN595227	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009416	GO:GO:0009628	GO:GO:0009813	GO:GO:0016491
GO:GO:0045486	GO:GO:0046872	GO:GO:0055114	EMBL:GU585859	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	EntrezGene:LOC100253950	wikigene:LOC100253950	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF137	SUPFAM:SSF51197	TIGR:TC51735	TIGR:TC70502
UniParc:UPI0001523C6F	ArrayExpress:VIT_18s0001g14310	EnsemblPlantsGene:VIT_18s0001g14310	EnsemblPlants:VIT_18s0001g14310.t01	RefSeq:XP_002275563	RefSeq:XP_002275563.1

Description

No Description!

Coordinates

chr18:+:12303077..12305027

Molecular Weight (calculated)

40417.3 Da

IEP (calculated)

5.229

GRAVY (calculated)

-0.449

Length

358 amino acids

Sequence
(BLAST)

001: MAPSTLTALV EEKTLQQSFV RDEDERPKVA YNQFSNEIPV ISLAGIDESE GRRSEICRKI VEACEDWGIF QVVDHGVDAN LVSDMTRLAR EFFALPAEEK
101: LRFDMSGGKK GGFIVSSHLQ GEAVQDWREI VTYFSYPLRT RDYSRWPDKP EGWRAVTEVY SEKLMGLACK LLEVLSEAMD LDKEALTKAC VDMDQKVVVN
201: YYPKCPQPDL TLGLKRHTDP GTITLLLQDQ VGGLQATRDG GKTWITVQPV EGAFVVNLGD HGHYLSNGRF KNADHQAVVN SDCSRLSIAT FQNPAPEAVV
301: YPLKIREGEK SVMEEPITFA EMYRRKMSKD LELARLKKLA KQQDQQERKP KGIEEILA

Best Arabidopsis Sequence Match ( AT3G51240.1 )
(BLAST)

001: MAPGTLTELA GESKLNSKFV RDEDERPKVA YNVFSDEIPV ISLAGIDDVD GKRGEICRQI VEACENWGIF QVVDHGVDTN LVADMTRLAR DFFALPPEDK
101: LRFDMSGGKK GGFIVSSHLQ GEAVQDWREI VTYFSYPVRN RDYSRWPDKP EGWVKVTEEY SERLMSLACK LLEVLSEAMG LEKESLTNAC VDMDQKIVVN
201: YYPKCPQPDL TLGLKRHTDP GTITLLLQDQ VGGLQATRDN GKTWITVQPV EGAFVVNLGD HGHFLSNGRF KNADHQAVVN SNSSRLSIAT FQNPAPDATV
301: YPLKVREGEK AILEEPITFA EMYKRKMGRD LELARLKKLA KEERDHKEVD KPVDQIFA

Arabidopsis Description

F3HNaringenin,2-oxoglutarate 3-dioxygenase [Source:UniProtKB/Swiss-Prot;Acc:Q9S818]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.