Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 1
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_18s0001g03470.t01 | Wine grape | cytosol | 77.31 | 80.43 |
| KRH53203 | Soybean | cytosol | 69.85 | 70.27 |
| KRH18787 | Soybean | cytosol | 68.06 | 68.26 |
| PGSC0003DMT400036565 | Potato | cytosol | 67.76 | 64.49 |
| Bra009358.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 64.48 | 64.29 |
| CDY21556 | Canola | cytoskeleton, cytosol, peroxisome | 64.48 | 64.29 |
| CDX69931 | Canola | cytoskeleton, cytosol, peroxisome | 64.18 | 63.99 |
| GSMUA_Achr3P07030_001 | Banana | cytosol | 63.28 | 63.66 |
| Solyc11g013110.1.1 | Tomato | cytosol, plastid | 66.87 | 63.64 |
| GSMUA_Achr10P... | Banana | cytosol | 59.4 | 63.58 |
| KRH16579 | Soybean | cytosol, mitochondrion | 57.31 | 63.58 |
| AT5G08640.1 | Thale cress | cytosol | 63.58 | 63.39 |
| GSMUA_Achr10P... | Banana | cytosol | 62.39 | 62.39 |
| GSMUA_Achr8P23330_001 | Banana | cytosol | 60.3 | 60.66 |
| Os02t0767300-01 | Rice | cytosol | 55.22 | 55.89 |
| EES07584 | Sorghum | cytosol | 53.13 | 53.61 |
| TraesCS6B01G362100.1 | Wheat | cytosol | 53.43 | 53.59 |
| TraesCS6A01G331400.1 | Wheat | plastid | 52.84 | 52.99 |
| TraesCS6D01G310700.1 | Wheat | plastid | 52.84 | 52.99 |
| VIT_18s0001g03430.t01 | Wine grape | cytosol | 51.34 | 51.81 |
| Zm00001d018184_P001 | Maize | endoplasmic reticulum | 48.36 | 51.43 |
| Zm00001d018181_P001 | Maize | endoplasmic reticulum, nucleus | 48.36 | 51.43 |
| AT5G63590.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 46.57 | 50.65 |
| Bra038648.1-P | Field mustard | cytosol | 44.78 | 50.51 |
| CDY41522 | Canola | cytosol | 44.48 | 50.17 |
| TraesCS4B01G344800.1 | Wheat | cytosol | 47.76 | 49.38 |
| CDY48154 | Canola | cytosol | 44.48 | 48.85 |
| TraesCS4B01G344900.1 | Wheat | cytosol, plastid | 44.78 | 48.54 |
| Bra018076.1-P | Field mustard | cytosol | 44.18 | 48.52 |
| TraesCS5A01G513700.1 | Wheat | cytosol, plastid | 48.36 | 48.21 |
| TraesCS4D01G339800.1 | Wheat | cytosol, plastid | 48.36 | 48.21 |
| CDY39565 | Canola | cytosol | 43.88 | 48.2 |
| HORVU6Hr1G056710.2 | Barley | cytosol, peroxisome | 10.15 | 47.22 |
| CDY39860 | Canola | cytosol | 43.28 | 46.93 |
| Bra037747.1-P | Field mustard | cytosol | 43.88 | 46.82 |
| AT5G43935.1 | Thale cress | cytosol | 40.9 | 46.76 |
| Bra038647.1-P | Field mustard | cytosol | 42.69 | 46.58 |
| CDY69013 | Canola | cytosol | 42.69 | 46.58 |
| CDY31361 | Canola | cytosol | 42.09 | 45.48 |
| AT5G63580.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 33.73 | 45.2 |
| Bra029211.1-P | Field mustard | cytosol | 41.79 | 45.16 |
| EES00073 | Sorghum | cytosol | 41.19 | 44.81 |
| AT5G63600.2 | Thale cress | cytosol | 43.58 | 44.79 |
| AT5G63595.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 37.01 | 44.44 |
| CDX81188 | Canola | cytosol | 42.39 | 44.38 |
| CDX97750 | Canola | cytosol | 28.66 | 43.44 |
| CDY41520 | Canola | cytosol | 31.64 | 42.91 |
| VIT_02s0025g04720.t01 | Wine grape | cytosol, peroxisome, plastid | 43.58 | 41.13 |
| HORVU6Hr1G080360.1 | Barley | plastid | 41.19 | 39.43 |
| VIT_18s0001g03510.t01 | Wine grape | cytosol | 80.0 | 39.41 |
| VIT_16s0013g00730.t01 | Wine grape | cytosol | 21.19 | 35.5 |
| VIT_13s0067g01020.t01 | Wine grape | cytosol | 37.31 | 34.82 |
| VIT_13s0047g00210.t01 | Wine grape | cytosol | 34.93 | 34.72 |
| CDY31363 | Canola | cytosol | 42.69 | 33.89 |
| VIT_16s0098g00860.t01 | Wine grape | cytosol, peroxisome, plastid | 34.03 | 33.73 |
| Bra029212.1-P | Field mustard | cytosol | 42.39 | 33.65 |
| VIT_08s0105g00380.t01 | Wine grape | cytosol | 35.82 | 33.52 |
| VIT_03s0017g02350.t01 | Wine grape | cytosol | 34.33 | 32.39 |
| VIT_02s0025g02960.t01 | Wine grape | cytosol | 33.43 | 32.18 |
| VIT_15s0048g02430.t01 | Wine grape | cytosol | 32.24 | 31.4 |
| VIT_02s0025g02970.t01 | Wine grape | cytosol | 32.24 | 31.03 |
| VIT_18s0001g06690.t01 | Wine grape | cytosol | 31.04 | 30.95 |
| VIT_00s0250g00090.t01 | Wine grape | cytosol | 32.24 | 28.88 |
| CDY41521 | Canola | cytosol, mitochondrion | 1.79 | 28.57 |
| VIT_08s0007g04540.t01 | Wine grape | cytosol | 31.94 | 28.38 |
| VIT_18s0001g14310.t01 | Wine grape | cytosol | 30.15 | 28.21 |
| VIT_07s0005g03150.t01 | Wine grape | cytosol, peroxisome, plastid | 28.36 | 27.86 |
| VIT_04s0023g03370.t01 | Wine grape | cytosol | 30.15 | 27.82 |
| VIT_03s0017g00710.t01 | Wine grape | plastid | 28.66 | 27.67 |
| VIT_16s0013g00740.t01 | Wine grape | cytosol, nucleus, peroxisome, plastid | 29.25 | 27.61 |
| VIT_03s0017g00620.t01 | Wine grape | cytosol | 28.96 | 27.56 |
| VIT_03s0017g00830.t01 | Wine grape | plastid | 30.45 | 18.82 |
Protein Annotations
| EntrezGene:100232939 | wikigene:100232939 | Gene3D:2.60.120.330 | MapMan:9.2.2.5.1 | ProteinID:AAP86223 | ProteinID:AAP86223.1 |
| EMBL:AB086055 | EMBL:AY257979 | ProteinID:BAE75806 | ProteinID:BAE75806.1 | ProteinID:CCB45508 | ProteinID:CCB45508.1 |
| InterPro:DIOX_N | UniProt:F6H0T9 | EMBL:FN595227 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016491 | GO:GO:0045431 | GO:GO:0046872 |
| GO:GO:0051555 | GO:GO:0055114 | InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | EntrezGene:LOC100232939 |
| wikigene:LOC100232939 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PFscan:PS51471 | PANTHER:PTHR10209 |
| PANTHER:PTHR10209:SF165 | SUPFAM:SSF51197 | TIGR:TC62110 | UniParc:UPI000198530C | ArrayExpress:VIT_18s0001g03490 | EnsemblPlantsGene:VIT_18s0001g03490 |
| EnsemblPlants:VIT_18s0001g03490.t01 | unigene:Vvi.8746 | RefSeq:XP_002285838 | RefSeq:XP_002285838.1 | : | : |
Description
No Description!
Coordinates
chr18:+:3349225..3350592
Molecular Weight (calculated)
38394.1 Da
IEP (calculated)
6.679
GRAVY (calculated)
-0.465
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMERVQAIA FSFMTEGRIP PEFIRSEKEQ PAITTLHGYD PQIPTIDFSD PDEDSLTRLI AEASRDWGMF QIVNHGIPTH VINNLQKVGE DFFALPQVEK
101: ELYAKPPDSK SIEGYGTRLQ KEEEGKRAWV DHLFHKIWPP SAINYQFWPK NPPSYRDANE VYAKCLRGVA DKLFSRLSVG LGLGEKELRE SVGGDELTYL
201: LKINYYPPCP RPDLALGVVA HTDMSAITIL VPNHVQGLQL FRDDHWFDVK YIPNALVIHI GDQLEILSNG KYKSVLHRTT VKKDMTRMSW PVFLEPPPEL
301: AIGPLPKLTS EDNPPKYKKK RYCDYVYCKL NKIPQ
101: ELYAKPPDSK SIEGYGTRLQ KEEEGKRAWV DHLFHKIWPP SAINYQFWPK NPPSYRDANE VYAKCLRGVA DKLFSRLSVG LGLGEKELRE SVGGDELTYL
201: LKINYYPPCP RPDLALGVVA HTDMSAITIL VPNHVQGLQL FRDDHWFDVK YIPNALVIHI GDQLEILSNG KYKSVLHRTT VKKDMTRMSW PVFLEPPPEL
301: AIGPLPKLTS EDNPPKYKKK RYCDYVYCKL NKIPQ
001: MEVERVQDIS SSSLLTEAIP LEFIRSEKEQ PAITTFRGPT PAIPVVDLSD PDEESVRRAV VKASEEWGLF QVVNHGIPTE LIRRLQDVGR KFFELPSSEK
101: ESVAKPEDSK DIEGYGTKLQ KDPEGKKAWV DHLFHRIWPP SCVNYRFWPK NPPEYREVNE EYAVHVKKLS ETLLGILSDG LGLKRDALKE GLGGEMAEYM
201: MKINYYPPCP RPDLALGVPA HTDLSGITLL VPNEVPGLQV FKDDHWFDAE YIPSAVIVHI GDQILRLSNG RYKNVLHRTT VDKEKTRMSW PVFLEPPREK
301: IVGPLPELTG DDNPPKFKPF AFKDYSYRKL NKLPLD
101: ESVAKPEDSK DIEGYGTKLQ KDPEGKKAWV DHLFHRIWPP SCVNYRFWPK NPPEYREVNE EYAVHVKKLS ETLLGILSDG LGLKRDALKE GLGGEMAEYM
201: MKINYYPPCP RPDLALGVPA HTDLSGITLL VPNEVPGLQV FKDDHWFDAE YIPSAVIVHI GDQILRLSNG RYKNVLHRTT VDKEKTRMSW PVFLEPPREK
301: IVGPLPELTG DDNPPKFKPF AFKDYSYRKL NKLPLD
Arabidopsis Description
FLS1Flavonol synthase/flavanone 3-hydroxylase [Source:UniProtKB/Swiss-Prot;Acc:Q96330]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.