Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 1
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_18s0001g03490.t01 | Wine grape | cytosol | 80.43 | 77.31 |
| KRH53203 | Soybean | cytosol | 69.25 | 66.97 |
| KRH18787 | Soybean | cytosol | 68.94 | 66.47 |
| GSMUA_Achr3P07030_001 | Banana | cytosol | 67.7 | 65.47 |
| KRH16579 | Soybean | cytosol, mitochondrion | 60.87 | 64.9 |
| PGSC0003DMT400036565 | Potato | cytosol | 69.57 | 63.64 |
| Solyc11g013110.1.1 | Tomato | cytosol, plastid | 68.94 | 63.07 |
| GSMUA_Achr10P... | Banana | cytosol | 64.29 | 61.79 |
| GSMUA_Achr10P... | Banana | cytosol | 59.32 | 61.02 |
| AT5G08640.1 | Thale cress | cytosol | 63.66 | 61.01 |
| Bra009358.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 63.35 | 60.71 |
| CDY21556 | Canola | cytoskeleton, cytosol, peroxisome | 63.35 | 60.71 |
| CDX69931 | Canola | cytoskeleton, cytosol, peroxisome | 63.04 | 60.42 |
| GSMUA_Achr8P23330_001 | Banana | cytosol | 62.42 | 60.36 |
| Os02t0767300-01 | Rice | cytosol | 57.76 | 56.19 |
| EES07584 | Sorghum | cytosol | 57.14 | 55.42 |
| TraesCS6A01G331400.1 | Wheat | plastid | 56.52 | 54.49 |
| TraesCS6B01G362100.1 | Wheat | cytosol | 56.52 | 54.49 |
| TraesCS6D01G310700.1 | Wheat | plastid | 56.52 | 54.49 |
| Zm00001d018184_P001 | Maize | endoplasmic reticulum | 52.8 | 53.97 |
| Zm00001d018181_P001 | Maize | endoplasmic reticulum, nucleus | 52.48 | 53.65 |
| TraesCS4B01G344800.1 | Wheat | cytosol | 51.86 | 51.54 |
| Bra038648.1-P | Field mustard | cytosol | 46.89 | 50.84 |
| CDY41522 | Canola | cytosol | 46.58 | 50.51 |
| TraesCS5A01G513700.1 | Wheat | cytosol, plastid | 52.17 | 50.0 |
| HORVU6Hr1G056710.2 | Barley | cytosol, peroxisome | 11.18 | 50.0 |
| AT5G63590.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 47.83 | 50.0 |
| VIT_18s0001g03430.t01 | Wine grape | cytosol | 51.55 | 50.0 |
| TraesCS4B01G344900.1 | Wheat | cytosol, plastid | 47.83 | 49.84 |
| TraesCS4D01G339800.1 | Wheat | cytosol, plastid | 51.55 | 49.4 |
| Bra037747.1-P | Field mustard | cytosol | 46.89 | 48.09 |
| EES00073 | Sorghum | cytosol | 45.34 | 47.4 |
| CDY39565 | Canola | cytosol | 44.72 | 47.21 |
| Bra018076.1-P | Field mustard | cytosol | 44.72 | 47.21 |
| CDY39860 | Canola | cytosol | 45.03 | 46.93 |
| CDY69013 | Canola | cytosol | 44.72 | 46.91 |
| Bra038647.1-P | Field mustard | cytosol | 44.72 | 46.91 |
| CDY48154 | Canola | cytosol | 44.41 | 46.89 |
| AT5G63595.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 40.06 | 46.24 |
| AT5G63580.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 35.4 | 45.6 |
| CDY31361 | Canola | cytosol | 43.79 | 45.48 |
| AT5G43935.1 | Thale cress | cytosol | 41.3 | 45.39 |
| Bra029211.1-P | Field mustard | cytosol | 43.48 | 45.16 |
| CDX81188 | Canola | cytosol | 44.72 | 45.0 |
| AT5G63600.2 | Thale cress | cytosol | 45.03 | 44.48 |
| CDY41520 | Canola | cytosol | 33.85 | 44.13 |
| CDX97750 | Canola | cytosol | 29.81 | 43.44 |
| VIT_02s0025g04720.t01 | Wine grape | cytosol, peroxisome, plastid | 46.89 | 42.54 |
| HORVU6Hr1G080360.1 | Barley | plastid | 42.86 | 39.43 |
| VIT_18s0001g03510.t01 | Wine grape | cytosol | 81.99 | 38.82 |
| VIT_16s0013g00730.t01 | Wine grape | cytosol | 23.29 | 37.5 |
| VIT_13s0067g01020.t01 | Wine grape | cytosol | 38.82 | 34.82 |
| CDY31363 | Canola | cytosol | 44.41 | 33.89 |
| VIT_13s0047g00210.t01 | Wine grape | cytosol | 35.4 | 33.83 |
| Bra029212.1-P | Field mustard | cytosol | 44.1 | 33.65 |
| VIT_16s0098g00860.t01 | Wine grape | cytosol, peroxisome, plastid | 34.47 | 32.84 |
| VIT_02s0025g02960.t01 | Wine grape | cytosol | 35.4 | 32.76 |
| VIT_08s0105g00380.t01 | Wine grape | cytosol | 36.02 | 32.4 |
| VIT_03s0017g02350.t01 | Wine grape | cytosol | 35.4 | 32.11 |
| VIT_15s0048g02430.t01 | Wine grape | cytosol | 33.54 | 31.4 |
| VIT_02s0025g02970.t01 | Wine grape | cytosol | 33.23 | 30.75 |
| VIT_18s0001g06690.t01 | Wine grape | cytosol | 31.68 | 30.36 |
| VIT_08s0007g04540.t01 | Wine grape | cytosol | 34.47 | 29.44 |
| VIT_16s0013g00740.t01 | Wine grape | cytosol, nucleus, peroxisome, plastid | 31.99 | 29.01 |
| VIT_18s0001g14310.t01 | Wine grape | cytosol | 31.99 | 28.77 |
| VIT_07s0005g03150.t01 | Wine grape | cytosol, peroxisome, plastid | 30.43 | 28.74 |
| VIT_04s0023g03370.t01 | Wine grape | cytosol | 32.3 | 28.65 |
| VIT_00s0250g00090.t01 | Wine grape | cytosol | 33.23 | 28.61 |
| CDY41521 | Canola | cytosol, mitochondrion | 1.86 | 28.57 |
| VIT_03s0017g00620.t01 | Wine grape | cytosol | 30.75 | 28.12 |
| VIT_03s0017g00710.t01 | Wine grape | plastid | 29.81 | 27.67 |
| VIT_03s0017g00830.t01 | Wine grape | plastid | 31.68 | 18.82 |
Protein Annotations
| EntrezGene:100232938 | wikigene:100232938 | Gene3D:2.60.120.330 | MapMan:9.2.2.5.1 | ProteinID:AAP86222 | ProteinID:AAP86222.1 |
| EMBL:AB092591 | ProteinID:ADP07941 | ProteinID:ADP07941.1 | EMBL:AM479525 | EMBL:AY257978 | ProteinID:BAE75808 |
| ProteinID:BAE75808.1 | ProteinID:CAN66280 | ProteinID:CAN66280.1 | ProteinID:CCB45507 | ProteinID:CCB45507.1 | InterPro:DIOX_N |
| UniProt:F6H0T8 | EntrezGene:FLS1 | wikigene:FLS1 | EMBL:FN595227 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016491 | GO:GO:0045431 |
| GO:GO:0046872 | GO:GO:0051555 | GO:GO:0055114 | EMBL:GU585864 | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PFscan:PS51471 | PANTHER:PTHR10209 |
| PANTHER:PTHR10209:SF165 | SUPFAM:SSF51197 | TIGR:TC60553 | UniParc:UPI000210A648 | ArrayExpress:VIT_18s0001g03470 | EnsemblPlantsGene:VIT_18s0001g03470 |
| EnsemblPlants:VIT_18s0001g03470.t01 | RefSeq:XP_002285839 | RefSeq:XP_002285839.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr18:+:3338337..3340959
Molecular Weight (calculated)
36549.8 Da
IEP (calculated)
6.114
GRAVY (calculated)
-0.412
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAGIIPPEF IRSEKEQPAI TTFHGYIPQV PTIDLSDPDE EKLTRLIVEA SSEWGMFQIV NHGIPSDVIS NLQKVGKEFF ELPQEEKELY AKSPDSKSIQ
101: GYGSKLQKEV EGKKAWVDHL FHNIWPPPAI DYQFWPKKPP TYRAANEEYA KWLQGVADKL FGRLSLGLGL GEGTLKESVG GDELLYLLKI NYYPPCPRPD
201: LALGVVAHTD MSAITILIPN EVQGLQVFRD DHWFDVKYIS NALVIHVGDQ LEILSNGKYK AVLHRTTVNK EKTRMSWPVF LEPPSDQVVG PLPQLVNEEN
301: PARYKTKKYS DYVYCKLNKI PQ
101: GYGSKLQKEV EGKKAWVDHL FHNIWPPPAI DYQFWPKKPP TYRAANEEYA KWLQGVADKL FGRLSLGLGL GEGTLKESVG GDELLYLLKI NYYPPCPRPD
201: LALGVVAHTD MSAITILIPN EVQGLQVFRD DHWFDVKYIS NALVIHVGDQ LEILSNGKYK AVLHRTTVNK EKTRMSWPVF LEPPSDQVVG PLPQLVNEEN
301: PARYKTKKYS DYVYCKLNKI PQ
001: MEVERVQDIS SSSLLTEAIP LEFIRSEKEQ PAITTFRGPT PAIPVVDLSD PDEESVRRAV VKASEEWGLF QVVNHGIPTE LIRRLQDVGR KFFELPSSEK
101: ESVAKPEDSK DIEGYGTKLQ KDPEGKKAWV DHLFHRIWPP SCVNYRFWPK NPPEYREVNE EYAVHVKKLS ETLLGILSDG LGLKRDALKE GLGGEMAEYM
201: MKINYYPPCP RPDLALGVPA HTDLSGITLL VPNEVPGLQV FKDDHWFDAE YIPSAVIVHI GDQILRLSNG RYKNVLHRTT VDKEKTRMSW PVFLEPPREK
301: IVGPLPELTG DDNPPKFKPF AFKDYSYRKL NKLPLD
101: ESVAKPEDSK DIEGYGTKLQ KDPEGKKAWV DHLFHRIWPP SCVNYRFWPK NPPEYREVNE EYAVHVKKLS ETLLGILSDG LGLKRDALKE GLGGEMAEYM
201: MKINYYPPCP RPDLALGVPA HTDLSGITLL VPNEVPGLQV FKDDHWFDAE YIPSAVIVHI GDQILRLSNG RYKNVLHRTT VDKEKTRMSW PVFLEPPREK
301: IVGPLPELTG DDNPPKFKPF AFKDYSYRKL NKLPLD
Arabidopsis Description
FLS1Flavonol synthase/flavanone 3-hydroxylase [Source:UniProtKB/Swiss-Prot;Acc:Q96330]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.