Factsheet for GSMUA_Achr10P25250_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr2P02770_001
GSMUA_Achr4P24540_001
GSMUA_Achr6P10910_001
GSMUA_Achr6P16370_001
GSMUA_Achr7P16780_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G08640.1	GSMUA_Achr2P02770_001	AT3G51240.1	18467451
AT5G08640.1	GSMUA_Achr7P16780_001	AT3G51240.1	18467451
AT5G08640.1	GSMUA_Achr10P...	AT5G13930.1	18467451
AT5G08640.1	GSMUA_Achr10P...	AT5G13930.1	18467451
AT5G08640.1	GSMUA_Achr6P10910_001	AT5G13930.1	18467451
AT5G08640.1	GSMUA_Achr6P16370_001	AT5G13930.1	18467451
AT5G08640.1	GSMUA_Achr4P24540_001	AT5G42800.1	18467451
AT5G63590.1	GSMUA_Achr10P...	AT5G13930.1	18467451
AT5G63590.1	GSMUA_Achr10P...	AT5G13930.1	18467451
AT5G63590.1	GSMUA_Achr6P10910_001	AT5G13930.1	18467451
AT5G63590.1	GSMUA_Achr6P16370_001	AT5G13930.1	18467451

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	86.9	81.19
GSMUA_Achr3P07030_001	Banana	cytosol	75.72	71.17
GSMUA_Achr8P23330_001	Banana	cytosol	67.41	63.36
VIT_18s0001g03490.t01	Wine grape	cytosol	63.58	59.4
VIT_18s0001g03470.t01	Wine grape	cytosol	61.02	59.32
Os02t0767300-01	Rice	cytosol	61.66	58.31
AT5G08640.1	Thale cress	cytosol	61.98	57.74
Bra009358.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	61.34	57.14
CDX69931	Canola	cytoskeleton, cytosol, peroxisome	61.34	57.14
CDY21556	Canola	cytoskeleton, cytosol, peroxisome	61.34	57.14
EES07584	Sorghum	cytosol	59.42	56.02
TraesCS6D01G310700.1	Wheat	plastid	59.74	55.99
TraesCS6B01G362100.1	Wheat	cytosol	58.79	55.09
TraesCS6A01G331400.1	Wheat	plastid	58.15	54.49
KRH18787	Soybean	cytosol	57.83	54.19
KRH53203	Soybean	cytosol	57.51	54.05
Solyc11g013110.1.1	Tomato	cytosol, plastid	60.38	53.69
PGSC0003DMT400036565	Potato	cytosol	60.38	53.69
Zm00001d018184_P001	Maize	endoplasmic reticulum	53.67	53.33
Zm00001d018181_P001	Maize	endoplasmic reticulum, nucleus	53.67	53.33
TraesCS4B01G344900.1	Wheat	cytosol, plastid	52.4	53.07
TraesCS4D01G339800.1	Wheat	cytosol, plastid	55.27	51.49
KRH16579	Soybean	cytosol, mitochondrion	49.2	50.99
TraesCS5A01G513700.1	Wheat	cytosol, plastid	54.63	50.89
EES00073	Sorghum	cytosol	49.84	50.65
TraesCS4B01G344800.1	Wheat	cytosol	52.08	50.31
AT5G63590.1	Thale cress	cytoskeleton, cytosol, peroxisome	48.56	49.35
Bra018076.1-P	Field mustard	cytosol	47.92	49.18
HORVU6Hr1G056710.2	Barley	cytosol, peroxisome	11.18	48.61
CDY39565	Canola	cytosol	47.28	48.52
CDY48154	Canola	cytosol	47.28	48.52
Bra038648.1-P	Field mustard	cytosol	45.37	47.81
CDY41522	Canola	cytosol	45.05	47.47
CDY69013	Canola	cytosol	43.45	44.3
Bra038647.1-P	Field mustard	cytosol	43.13	43.97
AT5G63595.1	Thale cress	cytoskeleton, cytosol, peroxisome	38.66	43.37
AT5G43935.1	Thale cress	cytosol	40.58	43.34
Bra037747.1-P	Field mustard	cytosol	43.45	43.31
AT5G63600.2	Thale cress	cytosol	45.05	43.25
AT5G63580.1	Thale cress	cytoskeleton, cytosol, peroxisome	34.5	43.2
CDX97750	Canola	cytosol	30.35	42.99
CDY39860	Canola	cytosol	41.85	42.39
CDY31361	Canola	cytosol	41.85	42.26
CDX81188	Canola	cytosol	43.13	42.19
Bra029211.1-P	Field mustard	cytosol	41.53	41.94
CDY41520	Canola	cytosol	32.27	40.89
HORVU6Hr1G080360.1	Barley	plastid	44.41	39.71
GSMUA_Achr5P04080_001	Banana	cytosol, peroxisome, plastid	45.05	39.17
CDY41521	Canola	cytosol, mitochondrion	2.56	38.1
GSMUA_Achr6P32920_001	Banana	cytosol	36.74	35.06
GSMUA_Achr9P04430_001	Banana	cytosol	35.78	33.63
GSMUA_Achr5P10230_001	Banana	cytosol, nucleus, peroxisome	36.1	33.53
GSMUA_Achr5P29330_001	Banana	cytosol	37.7	33.24
GSMUA_Achr6P15610_001	Banana	cytosol	37.06	32.95
GSMUA_Achr10P...	Banana	cytosol	37.06	32.95
GSMUA_Achr11P...	Banana	cytosol	34.82	32.93
GSMUA_Achr2P10240_001	Banana	cytosol, nucleus, peroxisome	35.46	32.74
GSMUA_Achr4P30130_001	Banana	cytosol, nucleus, peroxisome	35.14	32.64
GSMUA_Achr8P12320_001	Banana	cytosol, nucleus, peroxisome	35.46	32.55
GSMUA_Achr5P12830_001	Banana	cytosol	35.14	32.45
GSMUA_Achr2P19210_001	Banana	cytosol	36.1	32.38
GSMUA_Achr1P03620_001	Banana	cytosol, nucleus, peroxisome	34.5	32.05
GSMUA_Achr7P15540_001	Banana	cytosol	36.1	31.92
GSMUA_Achr1P00770_001	Banana	cytosol	34.19	31.75
GSMUA_Achr5P08490_001	Banana	cytosol	36.1	31.65
CDY31363	Canola	cytosol	42.17	31.28
Bra029212.1-P	Field mustard	cytosol	41.85	31.04
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome	34.5	30.59
VIT_18s0001g03510.t01	Wine grape	cytosol	63.58	29.26
GSMUA_AchrUn_...	Banana	mitochondrion, plastid	36.1	28.97
GSMUA_Achr2P02770_001	Banana	cytosol	33.87	28.49
GSMUA_Achr7P16780_001	Banana	cytosol	33.55	28.15
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	34.19	28.08
GSMUA_Achr9P15020_001	Banana	cytosol	29.39	26.21
GSMUA_Achr9P23620_001	Banana	cytosol	31.63	26.19
GSMUA_Achr4P04450_001	Banana	cytosol, mitochondrion	26.2	25.23

Protein Annotations

Gene3D:2.60.120.330	MapMan:9.2.2.5.1	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr10G25250_001
EnsemblPlants:GSMUA_Achr10P25250_001	EnsemblPlants:GSMUA_Achr10T25250_001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0RL99
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF165
SUPFAM:SSF51197	UniParc:UPI00029691BC	SEG:seg	:	:	:

Description

Flavonol synthase/flavanone 3-hydroxylase [Source:GMGC_GENE;Acc:GSMUA_Achr10G25250_001]

Coordinates

chr10:-:29328762..29330222

Molecular Weight (calculated)

35188.5 Da

IEP (calculated)

6.083

GRAVY (calculated)

-0.241

Length

313 amino acids

Sequence
(BLAST)

001: MEMERVQAIA SVCAANGAMP PEFIRSEHEQ PGITTYRGPA PEIPVIDLAG DNQDQLTIAV AEASREWGIF QLLNHGIPGE VIRELQRVGM EFFELPQEEK
101: EKYAMAWVDF FFHYVSPPSR VNHAIWPKKP ADYRQVNEHY GKHLACLVDR MLMALSRGLG LGDHVLKEAL GGDGLEQLLK INYYPPCPRP DLALGVVAHT
201: DMSAITILVP NHVPGLQVFN DEHWIDVNYV PDAVIVHIGD QIEILSNGIY KSALHRTTVN KEKVRMSWPV FCSPPGEMVI GPLQQLVGDE SPPKYKAKKY
301: KDYAYCKLNK LPQ

Best Arabidopsis Sequence Match ( AT5G08640.1 )
(BLAST)

001: MEVERVQDIS SSSLLTEAIP LEFIRSEKEQ PAITTFRGPT PAIPVVDLSD PDEESVRRAV VKASEEWGLF QVVNHGIPTE LIRRLQDVGR KFFELPSSEK
101: ESVAKPEDSK DIEGYGTKLQ KDPEGKKAWV DHLFHRIWPP SCVNYRFWPK NPPEYREVNE EYAVHVKKLS ETLLGILSDG LGLKRDALKE GLGGEMAEYM
201: MKINYYPPCP RPDLALGVPA HTDLSGITLL VPNEVPGLQV FKDDHWFDAE YIPSAVIVHI GDQILRLSNG RYKNVLHRTT VDKEKTRMSW PVFLEPPREK
301: IVGPLPELTG DDNPPKFKPF AFKDYSYRKL NKLPLD

Arabidopsis Description

FLS1Flavonol synthase/flavanone 3-hydroxylase [Source:UniProtKB/Swiss-Prot;Acc:Q96330]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.