Factsheet for GSMUA_Achr5P29330_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	74.37	79.76
GSMUA_Achr6P15610_001	Banana	cytosol	66.76	67.33
GSMUA_Achr7P15540_001	Banana	cytosol	62.25	62.43
GSMUA_Achr9P04430_001	Banana	cytosol	58.03	61.86
GSMUA_Achr5P08490_001	Banana	cytosol	61.97	61.62
GSMUA_Achr10P...	Banana	cytosol	60.0	60.51
GSMUA_Achr6P32920_001	Banana	cytosol	52.96	57.32
GSMUA_Achr2P19210_001	Banana	cytosol	39.72	40.4
GSMUA_Achr4P30130_001	Banana	cytosol, nucleus, peroxisome	37.18	39.17
GSMUA_Achr5P10230_001	Banana	cytosol, nucleus, peroxisome	36.62	38.58
GSMUA_Achr10P...	Banana	cytosol	33.24	37.7
GSMUA_Achr8P23330_001	Banana	cytosol	35.21	37.54
GSMUA_Achr8P12320_001	Banana	cytosol, nucleus, peroxisome	36.06	37.54
GSMUA_Achr1P03620_001	Banana	cytosol, nucleus, peroxisome	35.49	37.39
GSMUA_Achr2P10240_001	Banana	cytosol, nucleus, peroxisome	35.49	37.17
GSMUA_Achr5P12830_001	Banana	cytosol	34.93	36.58
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome	36.34	36.54
GSMUA_Achr1P00770_001	Banana	cytosol	34.65	36.5
GSMUA_Achr10P...	Banana	cytosol	34.37	36.42
GSMUA_Achr3P07030_001	Banana	cytosol	33.8	36.04
GSMUA_Achr9P15020_001	Banana	cytosol	32.39	32.76
GSMUA_AchrUn_...	Banana	mitochondrion, plastid	35.77	32.56
GSMUA_Achr5P04080_001	Banana	cytosol, peroxisome, plastid	32.11	31.67
GSMUA_Achr2P02770_001	Banana	cytosol	32.96	31.45
GSMUA_Achr7P16780_001	Banana	cytosol	32.68	31.1
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	32.68	30.45
GSMUA_Achr9P23620_001	Banana	cytosol	31.55	29.63
GSMUA_Achr4P04450_001	Banana	cytosol, mitochondrion	25.07	27.38

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr5G29330_001
EnsemblPlants:GSMUA_Achr5P29330_001	EnsemblPlants:GSMUA_Achr5T29330_001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0T2Q7
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF238	SUPFAM:SSF51197	UniParc:UPI000294B744	:	:	:

Description

Putative Protein SRG1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G29330_001]

Coordinates

chr5:-:29116747..29118490

Molecular Weight (calculated)

39154.8 Da

IEP (calculated)

6.168

GRAVY (calculated)

-0.220

Length

355 amino acids

Sequence
(BLAST)

001: MDCLQEWPEP VVHVQALSDS ALTTIPDLYI KPPSERPSSD KGVATPHIPV IDLGGLAEGA AECRATICAV ADACRSWGFF QVVNHGVSPD LVRKVREVWR
101: GFFRLPMAEK QAYANNPRTY EGYGSRVGVE KGAILDWGDY FYLHLLPESI KNQDKWPALP SSCRQTVQEY GDEMVKLCGT LMKVLSISLG LDVDQLQAAF
201: GGDDVGACLR VNYYPRCPQP ELTLGLSPHS DPGGLTALLA DDCVKGLQVR RGDDWVTVQP VAGAFIVNIG DQIQILSNAK YKSVEHRVTV NAAQERLSLA
301: FFYNPRSDWP IAPVGQLVTP QRPPLYQATT FDEYRMHVRK NGPTGKTQVE SLKAI

Best Arabidopsis Sequence Match ( AT3G11180.1 )
(BLAST)

001: MNNLDEIKIE SKTCLNDQEQ EVKIDNMHMS DQDKNKIEIK NKSGLGEKWP EPIVRVQSLA ESNLTSLPDR YIKPPSQRPQ TTIIDHQPEV ADINIPIIDL
101: DSLFSGNEDD KKRISEACRE WGFFQVINHG VKPELMDAAR ETWKSFFNLP VEAKEVYSNS PRTYEGYGSR LGVEKGAILD WNDYYYLHFL PLALKDFNKW
201: PSLPSNIREM NDEYGKELVK LGGRLMTILS SNLGLRAEQL QEAFGGEDVG ACLRVNYYPK CPQPELALGL SPHSDPGGMT ILLPDDQVVG LQVRHGDTWI
301: TVNPLRHAFI VNIGDQIQIL SNSKYKSVEH RVIVNSEKER VSLAFFYNPK SDIPIQPMQQ LVTSTMPPLY PPMTFDQYRL FIRTQGPRGK SHVESHISPR

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J670]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.