Factsheet for GSMUA_AchrUn_randomP23790_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
cytosol 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr2P13050_001
GSMUA_Achr2P13060_001
GSMUA_Achr4P28360_001
GSMUA_Achr4P31660_001
GSMUA_Achr5P02420_001
GSMUA_Achr7P01060_001
GSMUA_Achr8P02960_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G10500.1	GSMUA_Achr2P13050_001	AT2G34710.1	21798944
AT4G10500.1	GSMUA_Achr2P13060_001	AT2G34710.1	21798944
AT4G10500.1	GSMUA_Achr4P28360_001	AT2G34710.1	21798944
AT4G10500.1	GSMUA_Achr4P31660_001	AT2G34710.1	21798944
AT4G10500.1	GSMUA_Achr5P02420_001	AT2G34710.1	21798944
AT4G10500.1	GSMUA_Achr7P01060_001	AT2G34710.1	21798944
AT4G10500.1	GSMUA_Achr8P02960_001	AT2G34710.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0025g02960.t01	Wine grape	cytosol	60.77	68.1
Zm00001d002564_P001	Maize	cytosol, peroxisome, plastid	61.28	68.09
Os04t0581100-01	Rice	cytosol, peroxisome, plastid	61.28	67.9
TraesCS2A01G394900.1	Wheat	plastid	60.51	67.62
VIT_15s0048g02430.t01	Wine grape	cytosol	59.49	67.44
EES12710	Sorghum	cytosol, peroxisome, plastid	60.51	67.24
TraesCS2B01G412900.1	Wheat	plastid	60.0	67.05
VIT_02s0025g02970.t01	Wine grape	cytosol	58.46	65.52
KRH06343	Soybean	cytosol	56.92	64.35
HORVU2Hr1G093950.12	Barley	peroxisome, plastid	57.44	64.18
KRH47765	Soybean	cytosol	56.67	64.06
CDX86858	Canola	cytosol	53.08	61.06
CDX99548	Canola	cytosol	53.08	61.06
CDX99549	Canola	vacuole	33.33	61.03
AT4G10500.1	Thale cress	plastid	54.62	61.03
TraesCS2D01G392900.1	Wheat	plastid	60.51	60.51
Bra037921.1-P	Field mustard	cytosol	54.1	60.11
Bra000712.1-P	Field mustard	cytosol, nucleus, peroxisome	53.85	59.83
CDY05103	Canola	cytosol, nucleus, peroxisome	53.59	59.54
AT4G10490.1	Thale cress	cytosol	52.82	59.2
CDX99550	Canola	cytosol	51.54	58.94
KRH68971	Soybean	cytosol	52.05	58.17
GSMUA_Achr1P03620_001	Banana	cytosol, nucleus, peroxisome	50.26	58.16
GSMUA_Achr8P12320_001	Banana	cytosol, nucleus, peroxisome	50.77	58.06
CDX90759	Canola	cytosol	44.87	57.95
Bra000713.1-P	Field mustard	plastid	51.79	57.71
CDX90761	Canola	plastid	51.79	57.71
GSMUA_Achr5P10230_001	Banana	cytosol, nucleus, peroxisome	48.97	56.68
GSMUA_Achr2P10240_001	Banana	cytosol, nucleus, peroxisome	49.23	56.64
GSMUA_Achr4P30130_001	Banana	cytosol, nucleus, peroxisome	48.46	56.08
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome	50.26	55.52
GSMUA_Achr1P00770_001	Banana	cytosol	47.69	55.19
GSMUA_Achr5P12830_001	Banana	cytosol	45.64	52.51
GSMUA_Achr11P...	Banana	cytosol	32.82	38.67
GSMUA_Achr9P15020_001	Banana	cytosol	34.62	38.46
GSMUA_Achr2P19210_001	Banana	cytosol	33.59	37.54
GSMUA_Achr5P08490_001	Banana	cytosol	34.1	37.25
GSMUA_Achr8P23330_001	Banana	cytosol	31.54	36.94
GSMUA_Achr6P15610_001	Banana	cytosol	32.82	36.36
GSMUA_Achr3P07030_001	Banana	cytosol	31.03	36.34
GSMUA_Achr7P15540_001	Banana	cytosol	32.82	36.16
GSMUA_Achr10P...	Banana	cytosol	28.97	36.1
GSMUA_Achr5P29330_001	Banana	cytosol	32.56	35.77
GSMUA_Achr10P...	Banana	cytosol	30.51	35.52
GSMUA_Achr9P04430_001	Banana	cytosol	29.74	34.83
GSMUA_Achr10P...	Banana	cytosol	31.28	34.66
GSMUA_Achr6P32920_001	Banana	cytosol	28.46	33.84
GSMUA_Achr7P16780_001	Banana	cytosol	32.05	33.51
GSMUA_Achr2P02770_001	Banana	cytosol	31.79	33.33
GSMUA_Achr9P23620_001	Banana	cytosol	31.79	32.8
GSMUA_Achr4P04450_001	Banana	cytosol, mitochondrion	26.92	32.31
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	30.77	31.5
GSMUA_Achr5P04080_001	Banana	cytosol, peroxisome, plastid	26.67	28.89

Protein Annotations

MapMan:11.8.3.4	Gene3D:2.60.120.330	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_AchrUn_randomG23790_001
EnsemblPlants:GSMUA_AchrUn_randomP23790_001	EnsemblPlants:GSMUA_AchrUn_randomT23790_001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0UBT7
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF251	SUPFAM:SSF51197	UniParc:UPI0002967181	:	:	:

Description

Putative Naringenin,2-oxoglutarate 3-dioxygenase [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG23790_001]

Coordinates

chrchrUn_random:-:117023579..117025195

Molecular Weight (calculated)

44007.6 Da

IEP (calculated)

8.005

GRAVY (calculated)

-0.214

Length

390 amino acids

Sequence
(BLAST)

001: MATTTTRLLL GDLVSHAKNV PLRYVRPPSA RPHLSAVEKS NATIPVVDLQ ELSGSGRAMV VKAIGSACQS DGFFQVKNHG IPDDVIGAML RVSKEFFRLP
101: ESERLKSYSD DPSRTTRLST SFNVRTEEVC NWRDFLRFHC YPLKDYVHEW PSNPSVFREV VGDYCKHARQ LALRLLEAIS ESLGLEKDYM EKALAKQAQH
201: MAINYYPPCP QPELTYGLPS HKDPNAITLL LQDGVSGLQV FRNGKWVAVD PIPNALVINI GDQIQVLSND RYKSVLHRAV VNDSSERISI PTFYCPSPDA
301: VIGPAQALVD EQHPAVYRSF TYGEYYDAFW NRGLQRESCL DILPLCLMAK TSAKFEDIQS LTRFVLYVKY KSKATNSSSW NVFIFFFLGI

Best Arabidopsis Sequence Match ( AT4G10500.1 )
(BLAST)

001: MATSAISKLL VSDFASSVHI PSNYVRPISD RPNLSEVESS GDSIPLIDLR DLHGPNRAVI VQQLASACST YGFFQIKNHG VPDTTVNKMQ TVAREFFHQP
101: ESERVKHYSA DPTKTTRLST SFNVGADKVL NWRDFLRLHC FPIEDFIEEW PSSPISFREV TAEYATSVRA LVLRLLEAIS ESLGLESDHI SNILGKHAQH
201: MAFNYYPPCP EPELTYGLPG HKDPTVITVL LQDQVSGLQV FKDDKWVAVS PIPNTFIVNI GDQMQVISND KYKSVLHRAV VNTENERLSI PTFYFPSTDA
301: VIGPAHELVN EQDSLAIYRT YPFVEYWDKF WNRSLATASC LDAFKAPTT

Arabidopsis Description

DLO1Protein DMR6-LIKE OXYGENASE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSA8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.