Factsheet for GSMUA_Achr2P13060_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
cytosol 2
nucleus 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr1P17670_001
GSMUA_Achr3P19420_001
GSMUA_Achr5P12010_001
GSMUA_Achr8P12100_001
GSMUA_Achr9P01870_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G30490.1	GSMUA_Achr3P19420_001	AT1G12980.1	17376809
AT1G30490.1	GSMUA_Achr9P01870_001	AT1G12980.1	17376809
AT1G30490.1	GSMUA_AchrUn_...	AT1G12980.1	17376809
AT1G30490.1	GSMUA_Achr3P19420_001	AT1G12980.1	18830673
AT1G30490.1	GSMUA_Achr9P01870_001	AT1G12980.1	18830673
AT1G30490.1	GSMUA_AchrUn_...	AT1G12980.1	18830673
AT1G30490.1	GSMUA_Achr1P17670_001	AT3G45610.1	21245844
AT1G30490.1	GSMUA_Achr5P12010_001	AT3G45610.1	21245844
AT2G34710.1	GSMUA_Achr11P...	AT2G18060.1	21245844
AT2G34710.1	GSMUA_Achr8P12100_001	AT2G18060.1	21245844
AT2G34710.1	GSMUA_Achr1P17670_001	AT3G45610.1	21245844
AT2G34710.1	GSMUA_Achr5P12010_001	AT3G45610.1	21245844

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX71242	Canola	peroxisome	45.24	45.24
Solyc01g057960.1.1	Tomato	plastid	45.24	27.54
CDY53980	Canola	cytosol, nucleus, peroxisome	34.52	18.71
GSMUA_Achr4P31660_001	Banana	cytosol	88.1	8.61
GSMUA_Achr7P01060_001	Banana	cytosol	86.9	8.5
GSMUA_Achr5P02420_001	Banana	cytosol	86.9	8.35
GSMUA_Achr4P28360_001	Banana	cytosol	89.29	8.33
VIT_10s0003g04670.t01	Wine grape	cytosol, nucleus, plastid	82.14	8.17
GSMUA_Achr8P02960_001	Banana	cytosol	80.95	8.1
PGSC0003DMT400054421	Potato	cytosol, nucleus, plastid	79.76	8.02
TraesCS5B01G378000.1	Wheat	cytosol, nucleus, plastid	82.14	8.0
TraesCS5D01G385300.1	Wheat	cytosol, nucleus, plastid	82.14	8.0
TraesCS5A01G375800.1	Wheat	cytosol, nucleus, plastid	82.14	8.0
Solyc02g069830.2.1	Tomato	nucleus	79.76	7.96
Os03t0640800-01	Rice	plastid	80.95	7.92
EER91178	Sorghum	nucleus	79.76	7.85
Zm00001d033246_P004	Maize	cytosol	79.76	7.83
Solyc02g024070.2.1	Tomato	cytosol, nucleus, plastid	78.57	7.76
PGSC0003DMT400030829	Potato	cytosol, nucleus, plastid	78.57	7.75
Zm00001d013699_P001	Maize	cytosol	78.57	7.71
KRH11775	Soybean	cytosol, nucleus, plastid	77.38	7.68
CDY43661	Canola	cytosol	73.81	7.63
KRH36781	Soybean	cytosol, nucleus, plastid	75.0	7.39
KRH59117	Soybean	cytosol	75.0	7.39
CDY02297	Canola	nucleus	73.81	7.38
Bra032394.1-P	Field mustard	cytosol, nucleus, plastid	73.81	7.38
Bra021926.1-P	Field mustard	cytosol	73.81	7.35
CDY31635	Canola	nucleus	73.81	7.3
CDX84286	Canola	cytosol	73.81	7.3
Bra005398.1-P	Field mustard	cytosol	73.81	7.3
KRH43001	Soybean	cytosol	73.81	7.3
AT2G34710.1	Thale cress	cytosol	73.81	7.28
CDY09572	Canola	cytosol, nucleus, plastid	72.62	7.26
Os12t0612700-01	Rice	nucleus	72.62	7.13
AT1G30490.1	Thale cress	nucleus	70.24	7.02
HORVU5Hr1G093150.2	Barley	cytosol, plastid	82.14	6.88
TraesCS5A01G043400.1	Wheat	cytosol, nucleus, plastid	69.05	6.86
GSMUA_Achr8P20090_001	Banana	cytosol	67.86	6.8
GSMUA_Achr5P06550_001	Banana	cytosol	67.86	6.79
GSMUA_Achr5P18530_001	Banana	cytosol, nucleus, plastid	66.67	6.71
TraesCS5B01G047200.1	Wheat	extracellular, mitochondrion, nucleus, plastid	70.24	6.71
TraesCS5D01G052300.1	Wheat	mitochondrion, plastid	69.05	6.57
HORVU5Hr1G010650.1	Barley	cytosol	60.71	5.94
EES17386	Sorghum	mitochondrion	58.33	5.72
Zm00001d031061_P007	Maize	mitochondrion	59.52	5.59
Zm00001d041489_P009	Maize	cytosol, nucleus, plastid	54.76	5.32
AT5G32670.1	Thale cress	cytosol, plastid	2.38	1.04
HORVU0Hr1G010250.3	Barley	cytosol	7.14	0.81
GSMUA_Achr2P13050_001	Banana	cytosol	5.95	0.64
Zm00001d018824_P001	Maize	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr2P13060_001	EnsemblPlants:GSMUA_Achr2T13060_001	EnsemblPlantsGene:GSMUA_Achr2G13060_001	InterPro:MEKHLA	PFAM:PF08670	UniParc:UPI000294F67A
UniProt:M0S7J7	MapMan:35.1	:	:	:	:

Description

Homeobox-leucine zipper protein HOX32 [Source:GMGC_GENE;Acc:GSMUA_Achr2G13060_001]

Coordinates

chr2:+:15310736..15311134

Molecular Weight (calculated)

9546.6 Da

IEP (calculated)

4.419

GRAVY (calculated)

0.157

Length

84 amino acids

Sequence
(BLAST)

1: MLETTLIALQ DLTLEKILDD NGRKVLCSEF PKIMQQGFSY LPAGICLSSM GRPVSYEQAV TWKVLNEEDS PHCLAFMFVN WSFV

Best Arabidopsis Sequence Match ( AT1G52150.1 )
(BLAST)

001: MAMSCKDGKL GCLDNGKYVR YTPEQVEALE RLYHDCPKPS SIRRQQLIRE CPILSNIEPK QIKVWFQNRR CREKQRKEAS RLQAVNRKLT AMNKLLMEEN
101: DRLQKQVSQL VHENSYFRQH TPNPSLPAKD TSCESVVTSG QHQLASQNPQ RDASPAGLLS IAEETLAEFL SKATGTAVEW VQMPGMKPGP DSIGIIAISH
201: GCTGVAARAC GLVGLEPTRV AEIVKDRPSW FRECRAVEVM NVLPTANGGT VELLYMQLYA PTTLAPPRDF WLLRYTSVLE DGSLVVCERS LKSTQNGPSM
301: PLVQNFVRAE MLSSGYLIRP CDGGGSIIHI VDHMDLEACS VPEVLRPLYE SPKVLAQKTT MAALRQLKQI AQEVTQTNSS VNGWGRRPAA LRALSQRLSR
401: GFNEAVNGFT DEGWSVIGDS MDDVTITVNS SPDKLMGLNL TFANGFAPVS NVVLCAKASM LLQNVPPAIL LRFLREHRSE WADNNIDAYL AAAVKVGPCS
501: ARVGGFGGQV ILPLAHTIEH EEFMEVIKLE GLGHSPEDAI VPRDIFLLQL CSGMDENAVG TCAELIFAPI DASFADDAPL LPSGFRIIPL DSAKEVSSPN
601: RTLDLASALE IGSAGTKAST DQSGNSTCAR SVMTIAFEFG IESHMQEHVA SMARQYVRGI ISSVQRVALA LSPSHISSQV GLRTPLGTPE AQTLARWICQ
701: SYRGYMGVEL LKSNSDGNES ILKNLWHHTD AIICCSMKAL PVFTFANQAG LDMLETTLVA LQDISLEKIF DDNGRKTLCS EFPQIMQQGF ACLQGGICLS
801: SMGRPVSYER AVAWKVLNEE ENAHCICFVF INWSFV

Arabidopsis Description

ATHB-15Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein [Source:UniProtKB/TrEMBL;Acc:B3H4G8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.