Factsheet for HORVU0Hr1G010250.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G047750.4
HORVU6Hr1G053460.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G30490.1	HORVU6Hr1G053460.1	AT1G12980.1	17376809
AT1G30490.1	HORVU6Hr1G053460.1	AT1G12980.1	18830673
AT1G30490.1	HORVU2Hr1G047750.4	AT3G45610.1	21245844
AT2G34710.1	HORVU2Hr1G047750.4	AT3G45610.1	21245844

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G043400.1	Wheat	cytosol, nucleus, plastid	90.34	79.55
HORVU5Hr1G010650.1	Barley	cytosol	91.54	79.49
TraesCS5D01G052300.1	Wheat	mitochondrion, plastid	90.34	76.22
TraesCS5B01G047200.1	Wheat	extracellular, mitochondrion, nucleus, plastid	88.86	75.31
Os12t0612700-01	Rice	nucleus	82.82	72.16
GSMUA_Achr2P13050_001	Banana	cytosol	71.81	68.5
HORVU5Hr1G061410.29	Barley	cytosol	24.83	64.01
VIT_10s0003g04670.t01	Wine grape	cytosol, nucleus, plastid	71.68	63.2
GSMUA_Achr4P31660_001	Banana	cytosol	72.21	62.63
KRH11775	Soybean	cytosol, nucleus, plastid	70.87	62.41
GSMUA_Achr5P02420_001	Banana	cytosol	73.02	62.24
KRH36781	Soybean	cytosol, nucleus, plastid	70.6	61.74
GSMUA_Achr7P01060_001	Banana	cytosol	70.87	61.47
PGSC0003DMT400030829	Potato	cytosol, nucleus, plastid	68.99	60.33
GSMUA_Achr8P02960_001	Banana	cytosol	67.52	59.95
KRH43001	Soybean	cytosol	68.19	59.84
PGSC0003DMT400054421	Potato	cytosol, nucleus, plastid	66.58	59.4
KRH59117	Soybean	cytosol	67.92	59.32
Solyc02g024070.2.1	Tomato	cytosol, nucleus, plastid	67.65	59.22
GSMUA_Achr4P28360_001	Banana	cytosol	71.54	59.22
Solyc02g069830.2.1	Tomato	nucleus	66.71	59.03
HORVU5Hr1G093150.2	Barley	cytosol, plastid	78.39	58.23
CDY43661	Canola	cytosol	63.22	57.93
Bra005398.1-P	Field mustard	cytosol	65.64	57.6
AT1G30490.1	Thale cress	nucleus	64.97	57.55
CDY31635	Canola	nucleus	65.5	57.48
CDX84286	Canola	cytosol	65.5	57.48
Bra021926.1-P	Field mustard	cytosol	64.97	57.41
AT2G34710.1	Thale cress	cytosol	65.5	57.28
CDY09572	Canola	cytosol, nucleus, plastid	64.43	57.14
CDY02297	Canola	nucleus	64.43	57.14
Bra032394.1-P	Field mustard	cytosol, nucleus, plastid	64.43	57.14
HORVU1Hr1G041790.2	Barley	nucleus	60.4	53.57
HORVU4Hr1G090030.9	Barley	nucleus	58.39	51.91
HORVU3Hr1G026990.3	Barley	cytosol, nucleus, plastid	55.3	48.76
AT5G32670.1	Thale cress	cytosol, plastid	10.2	39.58
Solyc01g057960.1.1	Tomato	plastid	3.89	21.01
CDY53980	Canola	cytosol, nucleus, peroxisome	4.16	20.0
CDX71242	Canola	peroxisome	1.21	10.71
GSMUA_Achr2P13060_001	Banana	cytosol	0.81	7.14

Protein Annotations

EnsemblPlants:HORVU0Hr1G010250.3	EnsemblPlantsGene:HORVU0Hr1G010250	Gene3D:3.30.530.20	GO:GO:0003674	GO:GO:0005488	GO:GO:0008289
InterPro:IPR002913	InterPro:IPR023393	InterPro:MEKHLA	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom	ncoils:Coil
PANTHER:PTHR24326	PANTHER:PTHR24326:SF494	PFAM:PF01852	PFAM:PF08670	PFscan:PS50848	SEG:seg
SMART:SM00234	SUPFAM:SSF55961	UniParc:UPI000B467E73	UniProt:A0A287DZ33	MapMan:15.5.3.2	:

Description

No Description!

Coordinates

chrchrUn:-:57999596..58004938

Molecular Weight (calculated)

80585.8 Da

IEP (calculated)

6.980

GRAVY (calculated)

-0.060

Length

745 amino acids

Sequence
(BLAST)

001: MFYPGARATE LNRVAFSCDR CREKQRKESS RMQTVNRKLT AMNKLLMEEN DRLQKQVSRL VYENVSAKSL KTKIHNASAA TTDTSCESVV TSGQQQALAA
101: PRPQRDANNP AGLLAIAEET LTAFMSKATG TAVEWVQMMG MKPGPDSIGI IAVSHNCIGV AARACGLVSL EPTKVAEILK DRPSWYRDCR CVDILHVFPT
201: GNGGTIELIY MQTYAPTTLA APRDFWTLRY TCGLEDGSLV ICERSLTQST GGPSGPNTPG FIRAEVLPSG YLIRPCEGGG SMIHIVDHVD LDAWSVPEVL
301: RPLYESPKIV AQKMTIAALR HIRQIAHESS GEIPYGAGRQ PAVLRTFSQR LSRGFNDAVS GFPDDGWSLL TSDGAEDITI TVNSSPNKLV GSHISPSPLF
401: SAIGGGILCA KASMLVQDVP PALLVRFLRE HRSEWADPGV DAYSAASLRA SPYAVPGLRA GGFMGNQVIL PLAHTLEHEE FLEVLRLEGH GFSHDEVLLA
501: RDMYLLQLCS GVDENASGAC AQLVFAPIDE SFADDAPLLP SGFRVIPLDT KTDVPSATRT LDLASALEVG SGGALRGSGD SPGGCTRSVL TIAFQFSFEN
601: HLRESVAAMA RQYVRAVMAS VQRVAMAIAP SRLGSQIQLK HPPGSPEALT LASWIGRSYR AHTGEEIRWL DTEEADSPLK LLWNHSDAIL CCSLKSSVVL
701: LGASKLCVEI APTLLVKVRS PPSRAPIVES WHLALCEGVR RIRWP

Best Arabidopsis Sequence Match ( AT1G30490.1 )
(BLAST)

001: MMAHHSMDDR DSPDKGFDSG KYVRYTPEQV EALERVYAEC PKPSSLRRQQ LIRECPILCN IEPRQIKVWF QNRRCREKQR KESARLQTVN RKLSAMNKLL
101: MEENDRLQKQ VSNLVYENGF MKHRIHTASG TTTDNSCESV VVSGQQRQQQ NPTHQHPQRD VNNPANLLSI AEETLAEFLC KATGTAVDWV QMIGMKPGPD
201: SIGIVAVSRN CSGIAARACG LVSLEPMKVA EILKDRPSWF RDCRCVETLN VIPTGNGGTI ELVNTQIYAP TTLAAARDFW TLRYSTSLED GSYVVCERSL
301: TSATGGPNGP LSSSFVRAKM LSSGFLIRPC DGGGSIIHIV DHVDLDVSSV PEVLRPLYES SKILAQKMTV AALRHVRQIA QETSGEVQYS GGRQPAVLRT
401: FSQRLCRGFN DAVNGFVDDG WSPMSSDGGE DITIMINSSS AKFAGSQYGS SFLPSFGSGV LCAKASMLLQ NVPPLVLIRF LREHRAEWAD YGVDAYSAAS
501: LRATPYAVPC VRTGGFPSNQ VILPLAQTLE HEEFLEVVRL GGHAYSPEDM GLSRDMYLLQ LCSGVDENVV GGCAQLVFAP IDESFADDAP LLPSGFRVIP
601: LDQKTNPNDH QSASRTRDLA SSLDGSTKTD SETNSRLVLT IAFQFTFDNH SRDNVATMAR QYVRNVVGSI QRVALAITPR PGSMQLPTSP EALTLVRWIT
701: RSYSIHTGAD LFGADSQSCG GDTLLKQLWD HSDAILCCSL KTNASPVFTF ANQAGLDMLE TTLVALQDIM LDKTLDDSGR RALCSEFAKI MQQGYANLPA
801: GICVSSMGRP VSYEQATVWK VVDDNESNHC LAFTLVSWSF V

Arabidopsis Description

ATHB-9Homeobox-leucine zipper protein ATHB-9 [Source:UniProtKB/Swiss-Prot;Acc:O04292]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.