Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P13060_001 | Banana | cytosol | 27.54 | 45.24 |
| Solyc02g024070.2.1 | Tomato | cytosol, nucleus, plastid | 56.52 | 9.17 |
| Solyc02g069830.2.1 | Tomato | nucleus | 52.9 | 8.67 |
| Solyc11g069470.1.1 | Tomato | cytosol, nucleus, plastid | 47.1 | 7.73 |
| GSMUA_Achr8P02960_001 | Banana | cytosol | 43.48 | 7.15 |
| GSMUA_Achr4P31660_001 | Banana | cytosol | 44.2 | 7.1 |
| GSMUA_Achr4P28360_001 | Banana | cytosol | 45.65 | 7.0 |
| GSMUA_Achr7P01060_001 | Banana | cytosol | 43.48 | 6.98 |
| TraesCS5D01G385300.1 | Wheat | cytosol, nucleus, plastid | 43.48 | 6.96 |
| TraesCS5B01G378000.1 | Wheat | cytosol, nucleus, plastid | 43.48 | 6.96 |
| TraesCS5A01G375800.1 | Wheat | cytosol, nucleus, plastid | 43.48 | 6.96 |
| Os03t0640800-01 | Rice | plastid | 42.75 | 6.87 |
| GSMUA_Achr5P02420_001 | Banana | cytosol | 43.48 | 6.86 |
| EER91178 | Sorghum | nucleus | 42.03 | 6.79 |
| Zm00001d033246_P004 | Maize | cytosol | 42.03 | 6.78 |
| Solyc08g066500.2.1 | Tomato | cytosol | 40.58 | 6.77 |
| Zm00001d013699_P001 | Maize | cytosol | 41.3 | 6.66 |
| Solyc03g120910.2.1 | Tomato | cytosol | 39.13 | 6.46 |
| Solyc12g044410.1.1 | Tomato | nucleus | 39.13 | 6.45 |
| TraesCS5A01G043400.1 | Wheat | cytosol, nucleus, plastid | 39.13 | 6.38 |
| Os12t0612700-01 | Rice | nucleus | 39.13 | 6.32 |
| HORVU5Hr1G010650.1 | Barley | cytosol | 39.13 | 6.29 |
| TraesCS5B01G047200.1 | Wheat | extracellular, mitochondrion, nucleus, plastid | 39.13 | 6.14 |
| TraesCS5D01G052300.1 | Wheat | mitochondrion, plastid | 39.13 | 6.12 |
| HORVU5Hr1G093150.2 | Barley | cytosol, plastid | 43.48 | 5.98 |
| EES17386 | Sorghum | mitochondrion | 36.96 | 5.95 |
| Zm00001d041489_P009 | Maize | cytosol, nucleus, plastid | 34.06 | 5.43 |
| Zm00001d031061_P007 | Maize | mitochondrion | 34.06 | 5.26 |
| HORVU0Hr1G010250.3 | Barley | cytosol | 21.01 | 3.89 |
| GSMUA_Achr2P13050_001 | Banana | cytosol | 21.01 | 3.71 |
| Zm00001d018824_P001 | Maize | cytosol | 1.45 | 1.46 |
Protein Annotations
| EnsemblPlants:Solyc01g057960.1.1 | EnsemblPlantsGene:Solyc01g057960.1 | UniParc:UPI0002761F02 | UniProt:K4AW06 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr1:+:64633642..64634961
Molecular Weight (calculated)
15902.3 Da
IEP (calculated)
6.497
GRAVY (calculated)
-0.012
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MYNLCTISWT TYGSFSKCHY QDNVAAVARQ YVRSIVGSVQ RVAMAIMLET TLLALEDLML DKIVDEAGRK VLLSEFSKIM QQGRPILYEQ AIAWKVLNGE
101: YNFQFCCANC ETMELYSRAK AQQEEILYLR EQIALARH
101: YNFQFCCANC ETMELYSRAK AQQEEILYLR EQIALARH
001: MAMSCKDGKL GCLDNGKYVR YTPEQVEALE RLYHDCPKPS SIRRQQLIRE CPILSNIEPK QIKVWFQNRR CREKQRKEAS RLQAVNRKLT AMNKLLMEEN
101: DRLQKQVSQL VHENSYFRQH TPNPSLPAKD TSCESVVTSG QHQLASQNPQ RDASPAGLLS IAEETLAEFL SKATGTAVEW VQMPGMKPGP DSIGIIAISH
201: GCTGVAARAC GLVGLEPTRV AEIVKDRPSW FRECRAVEVM NVLPTANGGT VELLYMQLYA PTTLAPPRDF WLLRYTSVLE DGSLVVCERS LKSTQNGPSM
301: PLVQNFVRAE MLSSGYLIRP CDGGGSIIHI VDHMDLEACS VPEVLRPLYE SPKVLAQKTT MAALRQLKQI AQEVTQTNSS VNGWGRRPAA LRALSQRLSR
401: GFNEAVNGFT DEGWSVIGDS MDDVTITVNS SPDKLMGLNL TFANGFAPVS NVVLCAKASM LLQNVPPAIL LRFLREHRSE WADNNIDAYL AAAVKVGPCS
501: ARVGGFGGQV ILPLAHTIEH EEFMEVIKLE GLGHSPEDAI VPRDIFLLQL CSGMDENAVG TCAELIFAPI DASFADDAPL LPSGFRIIPL DSAKQEVSSP
601: NRTLDLASAL EIGSAGTKAS TDQSGNSTCA RSVMTIAFEF GIESHMQEHV ASMARQYVRG IISSVQRVAL ALSPSHISSQ VGLRTPLGTP EAQTLARWIC
701: QSYRGYMGVE LLKSNSDGNE SILKNLWHHT DAIICCSMKA LPVFTFANQA GLDMLETTLV ALQDISLEKI FDDNGRKTLC SEFPQIMQQG FACLQGGICL
801: SSMGRPVSYE RAVAWKVLNE EENAHCICFV FINWSFV
101: DRLQKQVSQL VHENSYFRQH TPNPSLPAKD TSCESVVTSG QHQLASQNPQ RDASPAGLLS IAEETLAEFL SKATGTAVEW VQMPGMKPGP DSIGIIAISH
201: GCTGVAARAC GLVGLEPTRV AEIVKDRPSW FRECRAVEVM NVLPTANGGT VELLYMQLYA PTTLAPPRDF WLLRYTSVLE DGSLVVCERS LKSTQNGPSM
301: PLVQNFVRAE MLSSGYLIRP CDGGGSIIHI VDHMDLEACS VPEVLRPLYE SPKVLAQKTT MAALRQLKQI AQEVTQTNSS VNGWGRRPAA LRALSQRLSR
401: GFNEAVNGFT DEGWSVIGDS MDDVTITVNS SPDKLMGLNL TFANGFAPVS NVVLCAKASM LLQNVPPAIL LRFLREHRSE WADNNIDAYL AAAVKVGPCS
501: ARVGGFGGQV ILPLAHTIEH EEFMEVIKLE GLGHSPEDAI VPRDIFLLQL CSGMDENAVG TCAELIFAPI DASFADDAPL LPSGFRIIPL DSAKQEVSSP
601: NRTLDLASAL EIGSAGTKAS TDQSGNSTCA RSVMTIAFEF GIESHMQEHV ASMARQYVRG IISSVQRVAL ALSPSHISSQ VGLRTPLGTP EAQTLARWIC
701: QSYRGYMGVE LLKSNSDGNE SILKNLWHHT DAIICCSMKA LPVFTFANQA GLDMLETTLV ALQDISLEKI FDDNGRKTLC SEFPQIMQQG FACLQGGICL
801: SSMGRPVSYE RAVAWKVLNE EENAHCICFV FINWSFV
Arabidopsis Description
ATHB-15Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein [Source:UniProtKB/TrEMBL;Acc:B3H4G8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.