CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
EES05354

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G30490.1	EES05354	AT1G12980.1	17376809
AT1G30490.1	EES05354	AT1G12980.1	18830673

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033246_P004	Maize	cytosol	99.3	99.07
Zm00001d013699_P001	Maize	cytosol	98.83	98.6
Os03t0640800-01	Rice	plastid	95.67	95.11
TraesCS5D01G385300.1	Wheat	cytosol, nucleus, plastid	93.44	92.58
TraesCS5B01G378000.1	Wheat	cytosol, nucleus, plastid	93.21	92.34
TraesCS5A01G375800.1	Wheat	cytosol, nucleus, plastid	93.21	92.34
EES17386	Sorghum	mitochondrion	82.32	82.03
GSMUA_Achr4P31660_001	Banana	cytosol	81.97	81.49
VIT_10s0003g04670.t01	Wine grape	cytosol, nucleus, plastid	80.09	80.95
GSMUA_Achr7P01060_001	Banana	cytosol	80.8	80.33
GSMUA_Achr5P02420_001	Banana	cytosol	82.08	80.21
GSMUA_Achr2P13050_001	Banana	cytosol	73.3	80.15
GSMUA_Achr2P13060_001	Banana	cytosol	7.85	79.76
HORVU5Hr1G093150.2	Barley	cytosol, plastid	92.97	79.16
KRH11775	Soybean	cytosol, nucleus, plastid	77.52	78.25
GSMUA_Achr4P28360_001	Banana	cytosol	82.32	78.11
KRH36781	Soybean	cytosol, nucleus, plastid	77.52	77.7
GSMUA_Achr8P02960_001	Banana	cytosol	76.0	77.35
PGSC0003DMT400030829	Potato	cytosol, nucleus, plastid	76.7	76.88
Solyc02g024070.2.1	Tomato	cytosol, nucleus, plastid	75.76	76.03
PGSC0003DMT400054421	Potato	cytosol, nucleus, plastid	73.89	75.57
Solyc02g069830.2.1	Tomato	nucleus	74.24	75.3
KRH59117	Soybean	cytosol	75.18	75.26
KRH43001	Soybean	cytosol	74.59	75.03
CDY43661	Canola	cytosol	70.26	73.8
AT2G34710.1	Thale cress	cytosol	73.19	73.36
CDX84286	Canola	cytosol	72.6	73.03
CDY31635	Canola	nucleus	72.48	72.91
Bra005398.1-P	Field mustard	cytosol	72.48	72.91
AT1G30490.1	Thale cress	nucleus	71.31	72.41
CDY02297	Canola	nucleus	71.08	72.26
CDY09572	Canola	cytosol, nucleus, plastid	71.08	72.26
Bra032394.1-P	Field mustard	cytosol, nucleus, plastid	71.08	72.26
Bra021926.1-P	Field mustard	cytosol	71.31	72.24
EER94065	Sorghum	nucleus	66.28	67.54
OQU93425	Sorghum	nucleus	65.81	66.75
EES00115	Sorghum	cytosol, nucleus, plastid	61.24	61.97
CDX71242	Canola	peroxisome	4.68	47.62
Solyc01g057960.1.1	Tomato	plastid	6.79	42.03
AT5G32670.1	Thale cress	cytosol, plastid	9.37	41.67
CDY53980	Canola	cytosol, nucleus, peroxisome	7.38	40.65

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.2	Gene3D:3.30.530.20	EntrezGene:8062217	UniProt:C5WR86	ncoils:Coil
EnsemblPlants:EER91178	ProteinID:EER91178	ProteinID:EER91178.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0008289
InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:IPR002913	InterPro:IPR023393	InterPro:MEKHLA
PFAM:PF00046	PFAM:PF01852	PFAM:PF08670	PFscan:PS50071	PFscan:PS50848	PANTHER:PTHR24326
PANTHER:PTHR24326:SF494	SMART:SM00234	SMART:SM00389	EnsemblPlantsGene:SORBI_3001G157400	SUPFAM:SSF46689	SUPFAM:SSF55961
InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom	UniParc:UPI0001A8211C	RefSeq:XP_002464180.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:+:12747203..12752962

Molecular Weight (calculated)

93051.1 Da

IEP (calculated)

6.585

GRAVY (calculated)

-0.189

Length

854 amino acids

Sequence
(BLAST)

001: MAMVVVGGGK DRSSPGGGGA PQVDTGKYVR YTPEQVEALE RVYSECPKPS SLRRQQLIRE CPILSNIEPK QIKVWFQNRR CREKQRKEAS RLQTVNRKLT
101: AMNKLLMEEN DRLQKQVSRL VYENGYMRQQ LHNPSAATTD TSCESVVTSG QHHQQQNPAA PRPQRDANNP AGLLAIAEET LAEFLSKATG TAVDWVQMVG
201: MKPGPDSIGI IAVSHNCSGV AARACGLVSL EPTKVAEILK DRPSWYRDCR CVDILHVIPT GNGGTIELIY MQTYAPTTLA APRDFWTLRY TSGLEDGSLV
301: ICERSLTQST GGPSGPNTPN FVRAEVLPSG YLIRPCEGGG SMIHIVDHVD LDAWSVPEVL RPLYESPKIL AQKTTIAALR HIRQIAHESS GEMPYGGGRQ
401: PAVLRTFSQR LSRGFNDAVN GFPDDGWSLM SSDGAEDVTI AINSSPNKLI GPHVNSSQLF TTIGGGILCA KASMLLQNVP PALLVRFLRE HRSEWADPGV
501: DAYSAAALRA SPYAVPGLRA SGFMGSQVIL PLAHTLEHEE FLEVIRLEGH SLCHDEVVLS RDMYLLQLCS GVDENAAGAC AQLVFAPIDE SFADDAPLLP
601: SGFRVIPLDA KTDPPSGTRT LDLASTLEVG SGGTTRASSD ASSTCNTRSV LTIAFQFSYE NHLRESVAAM ARQYVRTVVA SVQRVAMAIA PSRLGGQLEM
701: KQTPGSPEAH TLARWIGRSY RFHTGAELLR TDTQCTDASL KALWQHSDSI MCCSLKAAPV FTFANQAGLD MLETTLIALQ DISLEKILDD DGRKALCTEY
801: PKIMQQGFAY LPGGVCVSSM GRPVSYEQAV AWKVLSDDDT PHCLAFMFVN WSFV

Best Arabidopsis Sequence Match ( AT2G34710.1 )
(BLAST)

001: MMMVHSMSRD MMNRESPDKG LDSGKYVRYT PEQVEALERV YTECPKPSSL RRQQLIRECP ILSNIEPKQI KVWFQNRRCR EKQRKEAARL QTVNRKLNAM
101: NKLLMEENDR LQKQVSNLVY ENGHMKHQLH TASGTTTDNS CESVVVSGQQ HQQQNPNPQH QQRDANNPAG LLSIAEEALA EFLSKATGTA VDWVQMIGMK
201: PGPDSIGIVA ISRNCSGIAA RACGLVSLEP MKVAEILKDR PSWLRDCRSV DTLSVIPAGN GGTIELIYTQ MYAPTTLAAA RDFWTLRYST CLEDGSYVVC
301: ERSLTSATGG PTGPPSSNFV RAEMKPSGFL IRPCDGGGSI LHIVDHVDLD AWSVPEVMRP LYESSKILAQ KMTVAALRHV RQIAQETSGE VQYGGGRQPA
401: VLRTFSQRLC RGFNDAVNGF VDDGWSPMGS DGAEDVTVMI NLSPGKFGGS QYGNSFLPSF GSGVLCAKAS MLLQNVPPAV LVRFLREHRS EWADYGVDAY
501: AAASLRASPF AVPCARAGGF PSNQVILPLA QTVEHEESLE VVRLEGHAYS PEDMGLARDM YLLQLCSGVD ENVVGGCAQL VFAPIDESFA DDAPLLPSGF
601: RIIPLEQKST PNGASANRTL DLASALEGST RQAGEADPNG CNFRSVLTIA FQFTFDNHSR DSVASMARQY VRSIVGSIQR VALAIAPRPG SNISPISVPT
701: SPEALTLVRW ISRSYSLHTG ADLFGSDSQT SGDTLLHQLW NHSDAILCCS LKTNASPVFT FANQTGLDML ETTLVALQDI MLDKTLDEPG RKALCSEFPK
801: IMQQGYAHLP AGVCASSMGR MVSYEQATVW KVLEDDESNH CLAFMFVNWS FV

Arabidopsis Description

ATHB-14Homeobox-leucine zipper protein ATHB-14 [Source:UniProtKB/Swiss-Prot;Acc:O04291]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.