Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G385300.1 | Wheat | cytosol, nucleus, plastid | 98.84 | 98.84 |
| TraesCS5B01G378000.1 | Wheat | cytosol, nucleus, plastid | 98.49 | 98.49 |
| Os03t0640800-01 | Rice | plastid | 93.16 | 93.48 |
| EER91178 | Sorghum | nucleus | 92.34 | 93.21 |
| Zm00001d033246_P004 | Maize | cytosol | 92.34 | 92.99 |
| Zm00001d013699_P001 | Maize | cytosol | 91.76 | 92.41 |
| TraesCS5A01G043400.1 | Wheat | cytosol, nucleus, plastid | 81.55 | 83.1 |
| HORVU5Hr1G093150.2 | Barley | cytosol, plastid | 96.29 | 82.75 |
| GSMUA_Achr2P13060_001 | Banana | cytosol | 8.0 | 82.14 |
| GSMUA_Achr4P31660_001 | Banana | cytosol | 80.63 | 80.91 |
| VIT_10s0003g04670.t01 | Wine grape | cytosol, nucleus, plastid | 78.77 | 80.36 |
| GSMUA_Achr5P02420_001 | Banana | cytosol | 81.32 | 80.21 |
| GSMUA_Achr7P01060_001 | Banana | cytosol | 79.7 | 79.98 |
| GSMUA_Achr2P13050_001 | Banana | cytosol | 71.11 | 78.49 |
| KRH11775 | Soybean | cytosol, nucleus, plastid | 77.03 | 78.49 |
| KRH36781 | Soybean | cytosol, nucleus, plastid | 77.26 | 78.17 |
| GSMUA_Achr4P28360_001 | Banana | cytosol | 80.97 | 77.56 |
| PGSC0003DMT400030829 | Potato | cytosol, nucleus, plastid | 76.57 | 77.46 |
| GSMUA_Achr8P02960_001 | Banana | cytosol | 74.48 | 76.52 |
| Solyc02g024070.2.1 | Tomato | cytosol, nucleus, plastid | 75.17 | 76.15 |
| PGSC0003DMT400054421 | Potato | cytosol, nucleus, plastid | 73.2 | 75.57 |
| KRH43001 | Soybean | cytosol | 74.25 | 75.38 |
| KRH59117 | Soybean | cytosol | 74.59 | 75.38 |
| Solyc02g069830.2.1 | Tomato | nucleus | 73.09 | 74.82 |
| CDY43661 | Canola | cytosol | 69.37 | 73.55 |
| AT2G34710.1 | Thale cress | cytosol | 72.27 | 73.12 |
| AT1G30490.1 | Thale cress | nucleus | 71.0 | 72.77 |
| CDY31635 | Canola | nucleus | 71.58 | 72.67 |
| Bra005398.1-P | Field mustard | cytosol | 71.58 | 72.67 |
| CDX84286 | Canola | cytosol | 71.46 | 72.56 |
| CDY02297 | Canola | nucleus | 70.65 | 72.5 |
| Bra032394.1-P | Field mustard | cytosol, nucleus, plastid | 70.65 | 72.5 |
| CDY09572 | Canola | cytosol, nucleus, plastid | 70.53 | 72.38 |
| Bra021926.1-P | Field mustard | cytosol | 70.77 | 72.36 |
| TraesCS1A01G157500.1 | Wheat | nucleus | 66.24 | 67.98 |
| TraesCS5A01G549700.1 | Wheat | nucleus | 63.81 | 65.63 |
| TraesCS3A01G312800.1 | Wheat | nucleus | 58.47 | 57.67 |
| CDX71242 | Canola | peroxisome | 4.76 | 48.81 |
| Solyc01g057960.1.1 | Tomato | plastid | 6.96 | 43.48 |
| AT5G32670.1 | Thale cress | cytosol, plastid | 9.4 | 42.19 |
| CDY53980 | Canola | cytosol, nucleus, peroxisome | 7.54 | 41.94 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.2 | Gene3D:3.30.530.20 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0008289 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:IPR002913 | InterPro:IPR023393 | InterPro:MEKHLA | PFAM:PF00046 | PFAM:PF01852 | PFAM:PF08670 |
| PFscan:PS50071 | PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF494 | SMART:SM00234 | SMART:SM00389 |
| SUPFAM:SSF46689 | SUPFAM:SSF55961 | InterPro:START-like_dom_sf | InterPro:START_lipid-bd_dom | EnsemblPlantsGene:TraesCS5A01G375800 | EnsemblPlants:TraesCS5A01G375800.1 |
| TIGR:cd00086 | TIGR:cd08875 | TIGR:cd14686 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr5A:+:573645493..573651017
Molecular Weight (calculated)
93738.9 Da
IEP (calculated)
6.507
GRAVY (calculated)
-0.182
Length
862 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGAMVVHGH GGGRDRDRDR SSPGGSGAPQ VDTGKYVRYT PEQVDALERV YSECPKPSSL RRQQLIRECP ILSNIEPKQI KVWFQNRRCR EKQRKEASRL
101: QTVNRKLSAM NKLLMEENDR LQKQVSRLVY ENGYMRTHLN NPSVATTDTS CESVVTSGQH QQQQQNAVVP RPQRDANNPA GLLAIAEETL AEFLSKATGT
201: AVDWVQMVGM KPGPDSIGIV AVSHNCSGVA ARACGLVSLE PTKVAEILKD RPSWYRDCRC VDVLQIIPTG NGGTIELIYM QTYAPTTLAA PRDFWILRYT
301: SGLEDGSLVI CERSLTQATG GPSGPNTPNF VRAEVLPSGY LIRPCEGGGS MIHIVDHVDL DAWSVPEVLR PLYESPKILA QKMTIAALRH IRQIAHESSG
401: EMPYGGGRQP AVLRTFSQRL SRGFNDAVNG FLDDGWSLMS SDGAEDVTIA INSSPNKLAG SHVNPSQMFT AIGGGVLCAK ASMLLQNVPP ALLVRFLREH
501: RSEWADPGVD AYSAAALRAS PYAVPGLRAS GFMGSQVILP LAHTLEHEEF LEVIRLEGHS LCHDEVVLSR DMYLLQLCSG VDENAAGACA QLVFAPIDES
601: FADDAPLLPS GFRVIPLDAK TDAPSATRTL DLASTLEVGP GGTRAPSDAS STSNTRSVLT IAFQFSYENH LRESVAAMAR QYVRTVVASV QRVAMAIAPS
701: RPGGQLEMKN PPGSPEAHTL ARWIGRSYRF HTGAELLCTE SQSADASLKA LWQHSDSIMC CSLKAAPVFT FANQAGLDML ETTLIALQDI SLEKILDDDG
801: RKALCSEFPK IMQQGFAYLP GGVCVSSMGR PVSYEQAVAW KVLGDDDAPH CLAFMFVNWS FV
101: QTVNRKLSAM NKLLMEENDR LQKQVSRLVY ENGYMRTHLN NPSVATTDTS CESVVTSGQH QQQQQNAVVP RPQRDANNPA GLLAIAEETL AEFLSKATGT
201: AVDWVQMVGM KPGPDSIGIV AVSHNCSGVA ARACGLVSLE PTKVAEILKD RPSWYRDCRC VDVLQIIPTG NGGTIELIYM QTYAPTTLAA PRDFWILRYT
301: SGLEDGSLVI CERSLTQATG GPSGPNTPNF VRAEVLPSGY LIRPCEGGGS MIHIVDHVDL DAWSVPEVLR PLYESPKILA QKMTIAALRH IRQIAHESSG
401: EMPYGGGRQP AVLRTFSQRL SRGFNDAVNG FLDDGWSLMS SDGAEDVTIA INSSPNKLAG SHVNPSQMFT AIGGGVLCAK ASMLLQNVPP ALLVRFLREH
501: RSEWADPGVD AYSAAALRAS PYAVPGLRAS GFMGSQVILP LAHTLEHEEF LEVIRLEGHS LCHDEVVLSR DMYLLQLCSG VDENAAGACA QLVFAPIDES
601: FADDAPLLPS GFRVIPLDAK TDAPSATRTL DLASTLEVGP GGTRAPSDAS STSNTRSVLT IAFQFSYENH LRESVAAMAR QYVRTVVASV QRVAMAIAPS
701: RPGGQLEMKN PPGSPEAHTL ARWIGRSYRF HTGAELLCTE SQSADASLKA LWQHSDSIMC CSLKAAPVFT FANQAGLDML ETTLIALQDI SLEKILDDDG
801: RKALCSEFPK IMQQGFAYLP GGVCVSSMGR PVSYEQAVAW KVLGDDDAPH CLAFMFVNWS FV
001: MMMVHSMSRD MMNRESPDKG LDSGKYVRYT PEQVEALERV YTECPKPSSL RRQQLIRECP ILSNIEPKQI KVWFQNRRCR EKQRKEAARL QTVNRKLNAM
101: NKLLMEENDR LQKQVSNLVY ENGHMKHQLH TASGTTTDNS CESVVVSGQQ HQQQNPNPQH QQRDANNPAG LLSIAEEALA EFLSKATGTA VDWVQMIGMK
201: PGPDSIGIVA ISRNCSGIAA RACGLVSLEP MKVAEILKDR PSWLRDCRSV DTLSVIPAGN GGTIELIYTQ MYAPTTLAAA RDFWTLRYST CLEDGSYVVC
301: ERSLTSATGG PTGPPSSNFV RAEMKPSGFL IRPCDGGGSI LHIVDHVDLD AWSVPEVMRP LYESSKILAQ KMTVAALRHV RQIAQETSGE VQYGGGRQPA
401: VLRTFSQRLC RGFNDAVNGF VDDGWSPMGS DGAEDVTVMI NLSPGKFGGS QYGNSFLPSF GSGVLCAKAS MLLQNVPPAV LVRFLREHRS EWADYGVDAY
501: AAASLRASPF AVPCARAGGF PSNQVILPLA QTVEHEESLE VVRLEGHAYS PEDMGLARDM YLLQLCSGVD ENVVGGCAQL VFAPIDESFA DDAPLLPSGF
601: RIIPLEQKST PNGASANRTL DLASALEGST RQAGEADPNG CNFRSVLTIA FQFTFDNHSR DSVASMARQY VRSIVGSIQR VALAIAPRPG SNISPISVPT
701: SPEALTLVRW ISRSYSLHTG ADLFGSDSQT SGDTLLHQLW NHSDAILCCS LKTNASPVFT FANQTGLDML ETTLVALQDI MLDKTLDEPG RKALCSEFPK
801: IMQQGYAHLP AGVCASSMGR MVSYEQATVW KVLEDDESNH CLAFMFVNWS FV
101: NKLLMEENDR LQKQVSNLVY ENGHMKHQLH TASGTTTDNS CESVVVSGQQ HQQQNPNPQH QQRDANNPAG LLSIAEEALA EFLSKATGTA VDWVQMIGMK
201: PGPDSIGIVA ISRNCSGIAA RACGLVSLEP MKVAEILKDR PSWLRDCRSV DTLSVIPAGN GGTIELIYTQ MYAPTTLAAA RDFWTLRYST CLEDGSYVVC
301: ERSLTSATGG PTGPPSSNFV RAEMKPSGFL IRPCDGGGSI LHIVDHVDLD AWSVPEVMRP LYESSKILAQ KMTVAALRHV RQIAQETSGE VQYGGGRQPA
401: VLRTFSQRLC RGFNDAVNGF VDDGWSPMGS DGAEDVTVMI NLSPGKFGGS QYGNSFLPSF GSGVLCAKAS MLLQNVPPAV LVRFLREHRS EWADYGVDAY
501: AAASLRASPF AVPCARAGGF PSNQVILPLA QTVEHEESLE VVRLEGHAYS PEDMGLARDM YLLQLCSGVD ENVVGGCAQL VFAPIDESFA DDAPLLPSGF
601: RIIPLEQKST PNGASANRTL DLASALEGST RQAGEADPNG CNFRSVLTIA FQFTFDNHSR DSVASMARQY VRSIVGSIQR VALAIAPRPG SNISPISVPT
701: SPEALTLVRW ISRSYSLHTG ADLFGSDSQT SGDTLLHQLW NHSDAILCCS LKTNASPVFT FANQTGLDML ETTLVALQDI MLDKTLDEPG RKALCSEFPK
801: IMQQGYAHLP AGVCASSMGR MVSYEQATVW KVLEDDESNH CLAFMFVNWS FV
Arabidopsis Description
ATHB-14Homeobox-leucine zipper protein ATHB-14 [Source:UniProtKB/Swiss-Prot;Acc:O04291]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.