Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY02297 | Canola | nucleus | 94.89 | 95.0 |
| Bra032394.1-P | Field mustard | cytosol, nucleus, plastid | 94.77 | 94.88 |
| CDY09572 | Canola | cytosol, nucleus, plastid | 94.65 | 94.76 |
| AT2G34710.1 | Thale cress | cytosol | 85.37 | 84.27 |
| VIT_10s0003g04670.t01 | Wine grape | cytosol, nucleus, plastid | 77.17 | 76.8 |
| KRH11775 | Soybean | cytosol, nucleus, plastid | 76.58 | 76.12 |
| KRH36781 | Soybean | cytosol, nucleus, plastid | 77.05 | 76.06 |
| PGSC0003DMT400030829 | Potato | cytosol, nucleus, plastid | 76.69 | 75.7 |
| Solyc02g024070.2.1 | Tomato | cytosol, nucleus, plastid | 75.86 | 74.97 |
| KRH43001 | Soybean | cytosol | 74.67 | 73.97 |
| Solyc02g069830.2.1 | Tomato | nucleus | 73.48 | 73.4 |
| PGSC0003DMT400054421 | Potato | cytosol, nucleus, plastid | 72.77 | 73.29 |
| KRH59117 | Soybean | cytosol | 73.96 | 72.92 |
| Os03t0640800-01 | Rice | plastid | 72.89 | 71.36 |
| EER91178 | Sorghum | nucleus | 72.41 | 71.31 |
| Zm00001d013699_P001 | Maize | cytosol | 72.41 | 71.14 |
| Zm00001d033246_P004 | Maize | cytosol | 72.29 | 71.03 |
| TraesCS5D01G385300.1 | Wheat | cytosol, nucleus, plastid | 72.77 | 71.0 |
| TraesCS5A01G375800.1 | Wheat | cytosol, nucleus, plastid | 72.77 | 71.0 |
| TraesCS5B01G378000.1 | Wheat | cytosol, nucleus, plastid | 72.65 | 70.88 |
| GSMUA_Achr4P31660_001 | Banana | cytosol | 72.29 | 70.78 |
| GSMUA_Achr2P13060_001 | Banana | cytosol | 7.02 | 70.24 |
| Os12t0612700-01 | Rice | nucleus | 71.11 | 69.94 |
| GSMUA_Achr7P01060_001 | Banana | cytosol | 71.22 | 69.73 |
| GSMUA_Achr5P02420_001 | Banana | cytosol | 72.06 | 69.34 |
| TraesCS5A01G043400.1 | Wheat | cytosol, nucleus, plastid | 69.56 | 69.15 |
| EES17386 | Sorghum | mitochondrion | 69.32 | 68.03 |
| GSMUA_Achr2P13050_001 | Banana | cytosol | 62.9 | 67.73 |
| GSMUA_Achr8P02960_001 | Banana | cytosol | 67.54 | 67.7 |
| GSMUA_Achr4P28360_001 | Banana | cytosol | 71.82 | 67.11 |
| TraesCS5D01G052300.1 | Wheat | mitochondrion, plastid | 69.8 | 66.48 |
| TraesCS5B01G047200.1 | Wheat | extracellular, mitochondrion, nucleus, plastid | 69.44 | 66.44 |
| HORVU5Hr1G010650.1 | Barley | cytosol | 67.78 | 66.43 |
| AT5G60690.1 | Thale cress | cytosol, nucleus, plastid | 65.76 | 65.68 |
| Zm00001d041489_P009 | Maize | cytosol, nucleus, plastid | 67.3 | 65.43 |
| HORVU0Hr1G010250.3 | Barley | cytosol | 57.55 | 64.97 |
| AT1G52150.2 | Thale cress | cytosol | 62.66 | 62.96 |
| Zm00001d031061_P007 | Maize | mitochondrion | 65.99 | 62.08 |
| AT4G32880.1 | Thale cress | nucleus | 60.64 | 61.22 |
| HORVU5Hr1G093150.2 | Barley | cytosol, plastid | 72.65 | 60.92 |
| Zm00001d018824_P001 | Maize | cytosol | 8.32 | 51.09 |
| AT5G32670.1 | Thale cress | cytosol, plastid | 11.3 | 49.48 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.2 | Gene3D:3.30.530.20 | EntrezGene:839928 | ProteinID:AAF19752.1 | ProteinID:AEE31232.1 |
| EMBL:AJ440967 | EMBL:AK221046 | EMBL:AK226570 | ArrayExpress:AT1G30490 | EnsemblPlantsGene:AT1G30490 | RefSeq:AT1G30490 |
| TAIR:AT1G30490 | RefSeq:AT1G30490-TAIR-G | EnsemblPlants:AT1G30490.1 | TAIR:AT1G30490.1 | ProteinID:CAA71854.1 | ncoils:Coil |
| GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 |
| GO:GO:0009058 | GO:GO:0009653 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009855 | GO:GO:0009880 |
| GO:GO:0009908 | GO:GO:0009943 | GO:GO:0009944 | GO:GO:0009987 | GO:GO:0010014 | GO:GO:0010072 |
| GO:GO:0030154 | GO:GO:0080060 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR002913 |
| InterPro:IPR023393 | InterPro:MEKHLA | RefSeq:NP_174337.1 | UniProt:O04292 | PFAM:PF00046 | PFAM:PF01852 |
| PFAM:PF08670 | Symbol:PHV | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000229 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009015 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020022 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0020148 | PO:PO:0025022 | PO:PO:0025281 |
| PFscan:PS50071 | PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF494 | SMART:SM00234 | SMART:SM00389 |
| SUPFAM:SSF46689 | SUPFAM:SSF55961 | InterPro:START-like_dom_sf | InterPro:START_lipid-bd_dom | UniParc:UPI000009E870 | SEG:seg |
Description
ATHB-9Homeobox-leucine zipper protein ATHB-9 [Source:UniProtKB/Swiss-Prot;Acc:O04292]
Coordinates
chr1:-:10796124..10801093
Molecular Weight (calculated)
92406.9 Da
IEP (calculated)
6.367
GRAVY (calculated)
-0.223
Length
841 amino acids
Sequence
(BLAST)
(BLAST)
001: MMAHHSMDDR DSPDKGFDSG KYVRYTPEQV EALERVYAEC PKPSSLRRQQ LIRECPILCN IEPRQIKVWF QNRRCREKQR KESARLQTVN RKLSAMNKLL
101: MEENDRLQKQ VSNLVYENGF MKHRIHTASG TTTDNSCESV VVSGQQRQQQ NPTHQHPQRD VNNPANLLSI AEETLAEFLC KATGTAVDWV QMIGMKPGPD
201: SIGIVAVSRN CSGIAARACG LVSLEPMKVA EILKDRPSWF RDCRCVETLN VIPTGNGGTI ELVNTQIYAP TTLAAARDFW TLRYSTSLED GSYVVCERSL
301: TSATGGPNGP LSSSFVRAKM LSSGFLIRPC DGGGSIIHIV DHVDLDVSSV PEVLRPLYES SKILAQKMTV AALRHVRQIA QETSGEVQYS GGRQPAVLRT
401: FSQRLCRGFN DAVNGFVDDG WSPMSSDGGE DITIMINSSS AKFAGSQYGS SFLPSFGSGV LCAKASMLLQ NVPPLVLIRF LREHRAEWAD YGVDAYSAAS
501: LRATPYAVPC VRTGGFPSNQ VILPLAQTLE HEEFLEVVRL GGHAYSPEDM GLSRDMYLLQ LCSGVDENVV GGCAQLVFAP IDESFADDAP LLPSGFRVIP
601: LDQKTNPNDH QSASRTRDLA SSLDGSTKTD SETNSRLVLT IAFQFTFDNH SRDNVATMAR QYVRNVVGSI QRVALAITPR PGSMQLPTSP EALTLVRWIT
701: RSYSIHTGAD LFGADSQSCG GDTLLKQLWD HSDAILCCSL KTNASPVFTF ANQAGLDMLE TTLVALQDIM LDKTLDDSGR RALCSEFAKI MQQGYANLPA
801: GICVSSMGRP VSYEQATVWK VVDDNESNHC LAFTLVSWSF V
101: MEENDRLQKQ VSNLVYENGF MKHRIHTASG TTTDNSCESV VVSGQQRQQQ NPTHQHPQRD VNNPANLLSI AEETLAEFLC KATGTAVDWV QMIGMKPGPD
201: SIGIVAVSRN CSGIAARACG LVSLEPMKVA EILKDRPSWF RDCRCVETLN VIPTGNGGTI ELVNTQIYAP TTLAAARDFW TLRYSTSLED GSYVVCERSL
301: TSATGGPNGP LSSSFVRAKM LSSGFLIRPC DGGGSIIHIV DHVDLDVSSV PEVLRPLYES SKILAQKMTV AALRHVRQIA QETSGEVQYS GGRQPAVLRT
401: FSQRLCRGFN DAVNGFVDDG WSPMSSDGGE DITIMINSSS AKFAGSQYGS SFLPSFGSGV LCAKASMLLQ NVPPLVLIRF LREHRAEWAD YGVDAYSAAS
501: LRATPYAVPC VRTGGFPSNQ VILPLAQTLE HEEFLEVVRL GGHAYSPEDM GLSRDMYLLQ LCSGVDENVV GGCAQLVFAP IDESFADDAP LLPSGFRVIP
601: LDQKTNPNDH QSASRTRDLA SSLDGSTKTD SETNSRLVLT IAFQFTFDNH SRDNVATMAR QYVRNVVGSI QRVALAITPR PGSMQLPTSP EALTLVRWIT
701: RSYSIHTGAD LFGADSQSCG GDTLLKQLWD HSDAILCCSL KTNASPVFTF ANQAGLDMLE TTLVALQDIM LDKTLDDSGR RALCSEFAKI MQQGYANLPA
801: GICVSSMGRP VSYEQATVWK VVDDNESNHC LAFTLVSWSF V
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.