Factsheet for AT4G32880.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011392.1-P	Field mustard	cytosol	97.0	97.0
Bra034539.1-P	Field mustard	nucleus	96.64	96.75
CDY28273	Canola	nucleus	85.71	96.75
CDY45021	Canola	nucleus	85.59	96.61
CDX68901	Canola	plastid	22.09	91.09
PGSC0003DMT400074932	Potato	nucleus	52.1	82.2
VIT_04s0008g03250.t01	Wine grape	cytosol	80.31	78.71
Solyc08g066500.2.1	Tomato	cytosol	78.03	78.6
KRH52763	Soybean	cytosol	79.59	78.46
KRH62081	Soybean	cytosol	79.47	78.44
PGSC0003DMT400074934	Potato	cytosol	78.63	78.07
AT1G52150.2	Thale cress	cytosol	74.79	74.43
GSMUA_Achr5P06550_001	Banana	cytosol	71.55	71.04
GSMUA_Achr8P20090_001	Banana	cytosol	70.95	70.53
EES00115	Sorghum	cytosol, nucleus, plastid	65.91	65.05
HORVU3Hr1G026990.3	Barley	cytosol, nucleus, plastid	64.11	63.2
Zm00001d008869_P001	Maize	cytosol	64.95	63.05
AT2G34710.1	Thale cress	cytosol	63.99	62.56
Os06t0720500-01	Rice	extracellular, mitochondrion, plastid	11.4	61.29
Os06t0722300-01	Rice	extracellular, mitochondrion, plastid	11.4	61.29
Os06t0722650-01	Rice	extracellular, mitochondrion, plastid	11.4	61.29
AT1G30490.1	Thale cress	nucleus	61.22	60.64
TraesCS3A01G312800.1	Wheat	nucleus	63.51	60.53
TraesCS3B01G159100.2	Wheat	cytosol, nucleus, plastid	63.51	60.39
AT5G60690.1	Thale cress	cytosol, nucleus, plastid	60.86	60.21
TraesCS3D01G141500.2	Wheat	nucleus	63.51	59.98
Os01t0200300-01	Rice	cytosol, peroxisome	28.33	54.76
Zm00001d014252_P002	Maize	cytosol	8.88	42.53
AT5G32670.1	Thale cress	cytosol, plastid	9.0	39.06

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.2	Gene3D:3.30.530.20	EntrezGene:829424	UniProt:A0A178UUJ8	ProteinID:AEE86138.1
EMBL:AJ441292	ArrayExpress:AT4G32880	EnsemblPlantsGene:AT4G32880	RefSeq:AT4G32880	TAIR:AT4G32880	RefSeq:AT4G32880-TAIR-G
EnsemblPlants:AT4G32880.1	TAIR:AT4G32880.1	Symbol:ATHB-8	EMBL:AY099631	Unigene:At.31628	EMBL:BT008798
ProteinID:CAA90703.1	ProteinID:CAB80005.1	ncoils:Coil	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0008284	GO:GO:0008289	GO:GO:0009058	GO:GO:0009653	GO:GO:0009719
GO:GO:0009733	GO:GO:0009790	GO:GO:0009791	GO:GO:0009987	GO:GO:0010014	GO:GO:0010067
GO:GO:0010072	GO:GO:0010089	GO:GO:0030154	GO:GO:0045597	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom
InterPro:IPR001356	InterPro:IPR002913	InterPro:IPR023393	InterPro:MEKHLA	RefSeq:NP_195014.1	ProteinID:OAO97295.1
PFAM:PF00046	PFAM:PF01852	PFAM:PF08670	PO:PO:0000026	PO:PO:0000036	PO:PO:0000037
PO:PO:0000230	PO:PO:0000293	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0003021
PO:PO:0004507	PO:PO:0005352	PO:PO:0005597	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009015	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009052	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0020149	PO:PO:0025022	PO:PO:0025275	PFscan:PS50071	PFscan:PS50848	PANTHER:PTHR24326
PANTHER:PTHR24326:SF344	UniProt:Q39123	SMART:SM00234	SMART:SM00389	SUPFAM:SSF46689	SUPFAM:SSF55961
InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom	UniParc:UPI00000A8E5B	:	:	:

Description

ATHB-8Homeobox-leucine zipper protein ATHB-8 [Source:UniProtKB/Swiss-Prot;Acc:Q39123]

Coordinates

chr4:-:15863339..15868650

Molecular Weight (calculated)

92001.5 Da

IEP (calculated)

6.236

GRAVY (calculated)

-0.186

Length

833 amino acids

Sequence
(BLAST)

001: MGGGSNNSHN MDNGKYVRYT PEQVEALERL YNDCPKPSSM RRQQLIRECP ILSNIEPKQI KVWFQNRRCR EKQRKEASRL QAVNRKLTAM NKLLMEENDR
101: LQKQVSHLVY ENSYFRQHPQ NQGNLATTDT SCESVVTSGQ HHLTPQHQPR DASPAGLLSI ADETLTEFIS KATGTAVEWV QMPGMKPGPD SIGIVAISHG
201: CTGIAARACG LVGLDPTRVA EILKDKPCWL RDCRSLDIVN VLSTANGGTL ELIYMQLYAP TTLAPARDFW MLRYTSVMED GSLVICERSL NNTQNGPSMP
301: PSPHFVRAEI LPSGYLIRPC EGGGSILHIV DHFDLEPWSV PEVLRSLYES STLLAQRTTM AALRYLRQIS QEISQPNVTG WGRRPAALRA LSQRLSKGFN
401: EAVNGFSDEG WSILESDGID DVTLLVNSSP TKMMMTSSLP FANGYTSMPS AVLCAKASML LQNVPPSILL RFLREHRQEW ADNSIDAYSA AAIKAGPCSL
501: PIPRPGSFGG QVILPLAHTI ENEEFMEVIK LESLGHYQED MMMPADIFLL QMCSGVDENA VESCAELIFA PIDASFSDDA PIIPSGFRII PLDSKSEGLS
601: PNRTLDLASA LDVGSRTAGD SCGSRGNSKS VMTIAFQLAF EMHMQENVAS MARQYVRSVI ASVQRVALAL SPSSHQLSGL RPPPASPEAH TLARWISHSY
701: RCYLGVDLLK PHGTDLLKSL WHHPDAVMCC SLKALSPVFT FANQAGLDML ETTLVALQDI TLDKIFDNNN GKKTLSSEFP QIMQQGFMCM DGGICMSSMG
801: RAVTYEKAVG WKVLNDDEDP HCICFMFLNW SFI

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.