Factsheet for Os06t0722650-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, extracellular

Predictor Summary:

plastid 2
mitochondrion 3
extracellular 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os04t0663200-01
Os09t0508500-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32880.1	Os04t0663200-01	AT3G51180.1	21798944
AT4G32880.1	Os09t0508500-02	AT5G41070.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0720500-01	Rice	extracellular, mitochondrion, plastid	100.0	100.0
Os06t0722300-01	Rice	extracellular, mitochondrion, plastid	100.0	100.0
KRH33388	Soybean	cytosol	12.9	19.23
PGSC0003DMT400074932	Potato	nucleus	61.94	18.18
EES00115	Sorghum	cytosol, nucleus, plastid	82.58	15.17
CDY69514	Canola	nucleus	60.65	14.92
HORVU3Hr1G026990.3	Barley	cytosol, nucleus, plastid	81.29	14.91
TraesCS3B01G159100.2	Wheat	cytosol, nucleus, plastid	81.29	14.38
TraesCS3A01G312800.1	Wheat	nucleus	80.65	14.3
TraesCS3D01G141500.2	Wheat	nucleus	81.29	14.29
CDY51188	Canola	nucleus	64.52	13.87
VIT_09s0002g03740.t01	Wine grape	cytosol	68.39	12.6
CDY45021	Canola	nucleus	60.0	12.6
CDY28273	Canola	nucleus	60.0	12.6
GSMUA_Achr5P06550_001	Banana	cytosol	67.74	12.51
AT1G52150.2	Thale cress	cytosol	66.45	12.31
CDY47819	Canola	cytosol	66.45	12.29
CDY60592	Canola	cytosol	66.45	12.29
GSMUA_Achr8P20090_001	Banana	cytosol	66.45	12.29
Bra018948.1-P	Field mustard	cytosol	66.45	12.29
VIT_04s0008g03250.t01	Wine grape	cytosol	67.1	12.24
Bra014315.1-P	Field mustard	cytosol	64.52	11.99
CDY02553	Canola	cytosol	64.52	11.98
PGSC0003DMT400006735	Potato	cytosol	64.52	11.98
Solyc03g120910.2.1	Tomato	cytosol	64.52	11.96
Solyc08g066500.2.1	Tomato	cytosol	62.58	11.73
PGSC0003DMT400074934	Potato	cytosol	62.58	11.56
AT4G32880.1	Thale cress	nucleus	61.29	11.4
Solyc12g044410.1.1	Tomato	nucleus	61.29	11.35
PGSC0003DMT400068037	Potato	cytosol	61.29	11.35
Bra011392.1-P	Field mustard	cytosol	60.65	11.28
Bra034539.1-P	Field mustard	nucleus	60.0	11.18
Os10t0480200-01	Rice	nucleus	58.06	10.71
Os03t0109400-02	Rice	nucleus	57.42	10.61
Os03t0640800-01	Rice	plastid	57.42	10.36
Os12t0612700-01	Rice	nucleus	56.77	10.29
Os10t0147300-02	Rice	plastid	3.23	4.59
Os03t0769800-01	Rice	plastid	6.45	4.13
Bra030088.1-P	Field mustard	mitochondrion	2.58	3.28
Zm00001d014252_P002	Maize	cytosol	1.29	1.15
Os01t0200300-01	Rice	cytosol, peroxisome	1.29	0.46
CDX68901	Canola	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:Os06t0722650-01	EnsemblPlantsGene:Os06g0722650	Gene3D:3.30.530.20	GO:GO:0003674	GO:GO:0005488	GO:GO:0008289
InterPro:IPR002913	InterPro:IPR023393	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom	PANTHER:PTHR24326	PANTHER:PTHR24326:SF217
PFAM:PF01852	PFscan:PS50848	ProteinID:BAS99541.1	ProteinID:BAS99554.1	ProteinID:BAS99558.1	SUPFAM:SSF55961
UniParc:UPI000393A3B4	UniProt:A0A0P0X196	MapMan:35.1	:	:	:

Description

Similar to Class III homeodomain-leucine zipper protein. (Os06t0722650-01);Similar to CORONA. (Os06t0722650-02)

Coordinates

chr6:-:30686347..30692634

Molecular Weight (calculated)

16895.5 Da

IEP (calculated)

8.498

GRAVY (calculated)

0.101

Length

155 amino acids

Sequence
(BLAST)

001: LISVVLNGRS SCSTCSLQLY APTTLAPAHD FWLLRYTSIL GDGSLVVCER SLSSKQGGPS MPLVQPFIRD EMLPSGFLIR PSDGGGSVIH IVDHMDLEPW
101: SVPEVVRPLY ESSALVAQKI SMAVAYKDTR SVITGWGRKL AALHALSQKA HHRLQ

Best Arabidopsis Sequence Match ( AT1G52150.1 )
(BLAST)

001: MAMSCKDGKL GCLDNGKYVR YTPEQVEALE RLYHDCPKPS SIRRQQLIRE CPILSNIEPK QIKVWFQNRR CREKQRKEAS RLQAVNRKLT AMNKLLMEEN
101: DRLQKQVSQL VHENSYFRQH TPNPSLPAKD TSCESVVTSG QHQLASQNPQ RDASPAGLLS IAEETLAEFL SKATGTAVEW VQMPGMKPGP DSIGIIAISH
201: GCTGVAARAC GLVGLEPTRV AEIVKDRPSW FRECRAVEVM NVLPTANGGT VELLYMQLYA PTTLAPPRDF WLLRYTSVLE DGSLVVCERS LKSTQNGPSM
301: PLVQNFVRAE MLSSGYLIRP CDGGGSIIHI VDHMDLEACS VPEVLRPLYE SPKVLAQKTT MAALRQLKQI AQEVTQTNSS VNGWGRRPAA LRALSQRLSR
401: GFNEAVNGFT DEGWSVIGDS MDDVTITVNS SPDKLMGLNL TFANGFAPVS NVVLCAKASM LLQNVPPAIL LRFLREHRSE WADNNIDAYL AAAVKVGPCS
501: ARVGGFGGQV ILPLAHTIEH EEFMEVIKLE GLGHSPEDAI VPRDIFLLQL CSGMDENAVG TCAELIFAPI DASFADDAPL LPSGFRIIPL DSAKEVSSPN
601: RTLDLASALE IGSAGTKAST DQSGNSTCAR SVMTIAFEFG IESHMQEHVA SMARQYVRGI ISSVQRVALA LSPSHISSQV GLRTPLGTPE AQTLARWICQ
701: SYRGYMGVEL LKSNSDGNES ILKNLWHHTD AIICCSMKAL PVFTFANQAG LDMLETTLVA LQDISLEKIF DDNGRKTLCS EFPQIMQQGF ACLQGGICLS
801: SMGRPVSYER AVAWKVLNEE ENAHCICFVF INWSFV

Arabidopsis Description

ATHB-15Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein [Source:UniProtKB/TrEMBL;Acc:B3H4G8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.