Factsheet for Solyc08g066500.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g038790.1.1
Solyc02g084080.1.1
Solyc02g084110.1.1
Solyc02g084160.1.1
Solyc02g084200.1.1
Solyc07g062080.2.1
Solyc10g007500.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32880.1	Solyc07g062080.2.1	AT1G53510.1	21798944
AT4G32880.1	Solyc10g007500.2.1	AT1G53510.1	21798944
AT4G32880.1	Solyc02g038790.1.1	AT3G51180.1	21798944
AT4G32880.1	Solyc02g084080.1.1	AT3G51180.1	21798944
AT4G32880.1	Solyc02g084110.1.1	AT3G51180.1	21798944
AT4G32880.1	Solyc02g084160.1.1	AT3G51180.1	21798944
AT4G32880.1	Solyc02g084200.1.1	AT3G51180.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400074932	Potato	nucleus	61.79	96.78
PGSC0003DMT400074934	Potato	cytosol	97.22	95.83
VIT_04s0008g03250.t01	Wine grape	cytosol	84.89	82.59
KRH62081	Soybean	cytosol	84.28	82.58
KRH52763	Soybean	cytosol	84.28	82.49
CDY69514	Canola	nucleus	60.7	79.68
Solyc03g120910.2.1	Tomato	cytosol	80.29	79.43
Bra011392.1-P	Field mustard	cytosol	78.84	78.27
Solyc12g044410.1.1	Tomato	nucleus	79.08	78.14
AT4G32880.1	Thale cress	nucleus	78.6	78.03
Bra034539.1-P	Field mustard	nucleus	78.48	78.0
CDY45021	Canola	nucleus	69.53	77.91
CDY28273	Canola	nucleus	69.41	77.78
GSMUA_Achr5P06550_001	Banana	cytosol	76.3	75.21
GSMUA_Achr8P20090_001	Banana	cytosol	76.06	75.06
CDX68901	Canola	plastid	17.29	70.79
EES00115	Sorghum	cytosol, nucleus, plastid	69.29	67.89
HORVU3Hr1G026990.3	Barley	cytosol, nucleus, plastid	67.71	66.27
Zm00001d008869_P001	Maize	cytosol	68.44	65.97
Solyc02g024070.2.1	Tomato	cytosol, nucleus, plastid	67.35	65.45
Solyc11g069470.1.1	Tomato	cytosol, nucleus, plastid	66.51	65.4
Solyc02g069830.2.1	Tomato	nucleus	65.66	64.49
TraesCS3A01G312800.1	Wheat	nucleus	68.08	64.42
TraesCS3B01G159100.2	Wheat	cytosol, nucleus, plastid	67.59	63.81
TraesCS3D01G141500.2	Wheat	nucleus	67.71	63.49
Os06t0722300-01	Rice	extracellular, mitochondrion, plastid	11.73	62.58
Os06t0722650-01	Rice	extracellular, mitochondrion, plastid	11.73	62.58
Os06t0720500-01	Rice	extracellular, mitochondrion, plastid	11.73	62.58
Os01t0200300-01	Rice	cytosol, peroxisome	31.44	60.32
Zm00001d014252_P002	Maize	cytosol	8.95	42.53
Solyc01g057960.1.1	Tomato	plastid	6.77	40.58

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.2	Gene3D:3.30.530.20	ncoils:Coil	GO:GO:0000003	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0007275	GO:GO:0008150	GO:GO:0008284	GO:GO:0008289	GO:GO:0009653
GO:GO:0009719	GO:GO:0009733	GO:GO:0009790	GO:GO:0009791	GO:GO:0009987	GO:GO:0010014
GO:GO:0010067	GO:GO:0010072	GO:GO:0010089	GO:GO:0030154	GO:GO:0045597	InterPro:Homeobox-like_sf
InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:IPR002913	InterPro:IPR023393	UniProt:K4CLM6	InterPro:MEKHLA
PFAM:PF00046	PFAM:PF01852	PFAM:PF08670	PFscan:PS50071	PFscan:PS50848	PANTHER:PTHR24326
PANTHER:PTHR24326:SF344	SMART:SM00234	SMART:SM00389	SUPFAM:SSF46689	SUPFAM:SSF55961	InterPro:START-like_dom_sf
InterPro:START_lipid-bd_dom	EnsemblPlantsGene:Solyc08g066500.2	EnsemblPlants:Solyc08g066500.2.1	UniParc:UPI000276BCAE	SEG:seg	:

Description

Homeobox-leucine zipper protein ATHB-8 [Source:Projected from Arabidopsis thaliana (AT4G32880) UniProtKB/Swiss-Prot;Acc:Q39123]

Coordinates

chr8:-:55206372..55211887

Molecular Weight (calculated)

90986.2 Da

IEP (calculated)

5.796

GRAVY (calculated)

-0.126

Length

827 amino acids

Sequence
(BLAST)

001: MDSGKYVRYT PEQVEALERL YHECPKPSSL RRQQLIRECP ILSNIEPKQI KVWFQNRRCR EKQRKESSRL QGVNRKLTAM NKLLMEENDR LQKQVSQLVY
101: ENSFFRQQTQ TAALATTDNN SCESVVTSGQ HNLTPQRPPR DASPAGLLSL AEETLTEFLS KATGTAVEWV QMPGMKPGPD SIGIIAISHG CSGVASRACG
201: LVGLEPTRVA EILKDRPSWF RDCRAVDVLN VMSTGNGGTI ELLYMQLYAP TTLAPARDFW LMRYTSVMED GSLVICERSL NNTQNGPSMP PVQSFVRADI
301: LPSGYLIRPC EGGGSIIHIV DHMDLEPWSV PEVLRPLYES STLLSQRTTM AALRHLRQIS QEISHPTVSG WGRRPAALRA LGQRLSKGFN EAVNGFTDEG
401: WSMLESDGVD DVTILVNSSP SKLMGANISY ANGFPSMSSA VLCAKASMLL QNVPPPILLR FLREHRSEWA DSGIDAYSAA AVKAGPCSIP VTRTGSFGGQ
501: IILPLAHTIE HEEFMEVIRL ESIGHYQDDM IMPSDIFLLQ LCNGVDENAI GTCAELMFAP IDASFADDAP LLPSGFRIIP LDSKADASSP NRTLDLASTL
601: EVGPAGSRPT GDHSKNSGSA KSVMTIAFQF AFEIHLQESI AAMARQYVRS IISSVQRVAL ALSPSRIGSL PGLRSPPGTP EAQTLARWIC QSYRFFLGVE
701: LLKSASGGSE SILKEIWDHS DALMCCSMKA LPVFTFANEA GLDMLETTLV ALQDISLEKI FDDNGRKALY SELPQIMQQG FACLQGGICL SSMGRPISYE
801: RAVAWKVLNE EEDAHCICFM FINWSFV

Best Arabidopsis Sequence Match ( AT1G52150.1 )
(BLAST)

001: MAMSCKDGKL GCLDNGKYVR YTPEQVEALE RLYHDCPKPS SIRRQQLIRE CPILSNIEPK QIKVWFQNRR CREKQRKEAS RLQAVNRKLT AMNKLLMEEN
101: DRLQKQVSQL VHENSYFRQH TPNPSLPAKD TSCESVVTSG QHQLASQNPQ RDASPAGLLS IAEETLAEFL SKATGTAVEW VQMPGMKPGP DSIGIIAISH
201: GCTGVAARAC GLVGLEPTRV AEIVKDRPSW FRECRAVEVM NVLPTANGGT VELLYMQLYA PTTLAPPRDF WLLRYTSVLE DGSLVVCERS LKSTQNGPSM
301: PLVQNFVRAE MLSSGYLIRP CDGGGSIIHI VDHMDLEACS VPEVLRPLYE SPKVLAQKTT MAALRQLKQI AQEVTQTNSS VNGWGRRPAA LRALSQRLSR
401: GFNEAVNGFT DEGWSVIGDS MDDVTITVNS SPDKLMGLNL TFANGFAPVS NVVLCAKASM LLQNVPPAIL LRFLREHRSE WADNNIDAYL AAAVKVGPCS
501: ARVGGFGGQV ILPLAHTIEH EEFMEVIKLE GLGHSPEDAI VPRDIFLLQL CSGMDENAVG TCAELIFAPI DASFADDAPL LPSGFRIIPL DSAKEVSSPN
601: RTLDLASALE IGSAGTKAST DQSGNSTCAR SVMTIAFEFG IESHMQEHVA SMARQYVRGI ISSVQRVALA LSPSHISSQV GLRTPLGTPE AQTLARWICQ
701: SYRGYMGVEL LKSNSDGNES ILKNLWHHTD AIICCSMKAL PVFTFANQAG LDMLETTLVA LQDISLEKIF DDNGRKTLCS EFPQIMQQGF ACLQGGICLS
801: SMGRPVSYER AVAWKVLNEE ENAHCICFVF INWSFV

Arabidopsis Description

ATHB-15Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein [Source:UniProtKB/TrEMBL;Acc:B3H4G8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.