Factsheet for Os01t0200300-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os04t0663200-01
Os09t0508500-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32880.1	Os04t0663200-01	AT3G51180.1	21798944
AT4G32880.1	Os09t0508500-02	AT5G41070.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68901	Canola	plastid	28.07	59.9
EES00115	Sorghum	cytosol, nucleus, plastid	77.26	39.45
HORVU3Hr1G026990.3	Barley	cytosol, nucleus, plastid	75.41	38.46
TraesCS3A01G312800.1	Wheat	nucleus	76.57	37.76
TraesCS3B01G159100.2	Wheat	cytosol, nucleus, plastid	75.41	37.1
TraesCS3D01G141500.2	Wheat	nucleus	74.94	36.62
Solyc08g066500.2.1	Tomato	cytosol	60.32	31.44
VIT_04s0008g03250.t01	Wine grape	cytosol	61.02	30.94
PGSC0003DMT400006735	Potato	cytosol	59.16	30.54
Solyc03g120910.2.1	Tomato	cytosol	58.93	30.38
VIT_09s0002g03740.t01	Wine grape	cytosol	58.93	30.2
PGSC0003DMT400074934	Potato	cytosol	58.7	30.15
Bra018948.1-P	Field mustard	cytosol	58.47	30.07
AT1G52150.2	Thale cress	cytosol	58.24	29.99
CDY60592	Canola	cytosol	58.24	29.95
CDY02553	Canola	cytosol	58.0	29.94
PGSC0003DMT400068037	Potato	cytosol	58.0	29.87
CDY47819	Canola	cytosol	57.77	29.71
Solyc12g044410.1.1	Tomato	nucleus	57.54	29.63
Bra014315.1-P	Field mustard	cytosol	57.31	29.62
GSMUA_Achr8P20090_001	Banana	cytosol	56.61	29.12
GSMUA_Achr5P06550_001	Banana	cytosol	56.38	28.96
Bra011392.1-P	Field mustard	cytosol	54.99	28.45
AT4G32880.1	Thale cress	nucleus	54.76	28.33
Bra034539.1-P	Field mustard	nucleus	54.52	28.25
Os03t0640800-01	Rice	plastid	52.44	26.31
Os12t0612700-01	Rice	nucleus	49.88	25.15
Os10t0480200-01	Rice	nucleus	48.49	24.88
Os03t0109400-02	Rice	nucleus	46.64	23.96
CDY45021	Canola	nucleus	39.91	23.31
CDY28273	Canola	nucleus	39.68	23.17
CDY51188	Canola	nucleus	37.82	22.61
CDY69514	Canola	nucleus	26.91	18.41
PGSC0003DMT400074932	Potato	nucleus	14.62	11.93
Zm00001d014252_P002	Maize	cytosol	3.94	9.77
Os03t0769800-01	Rice	plastid	2.78	4.96
Os10t0147300-02	Rice	plastid	1.16	4.59
Bra030088.1-P	Field mustard	mitochondrion	0.7	2.46
KRH33388	Soybean	cytosol	0.46	1.92
Os06t0722650-01	Rice	extracellular, mitochondrion, plastid	0.46	1.29
Os06t0722300-01	Rice	extracellular, mitochondrion, plastid	0.46	1.29
Os06t0720500-01	Rice	extracellular, mitochondrion, plastid	0.46	1.29

Protein Annotations

EnsemblPlants:Os01t0200300-01	EnsemblPlantsGene:Os01g0200300	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0008289	InterPro:MEKHLA
PANTHER:PTHR24326	PANTHER:PTHR24326:SF217	PFAM:PF08670	ProteinID:BAS70900.1	SEG:seg	UniParc:UPI0000DD89E5
UniProt:A0A0P0UZH0	MapMan:15.5.3.2	:	:	:	:

Description

HOMEOBOX GENE 29Similar to Homeobox-leucine zipper protein HOX29. (Os01t0200300-01)

Coordinates

chr1:-:5426582..5429390

Molecular Weight (calculated)

45985.0 Da

IEP (calculated)

4.755

GRAVY (calculated)

0.189

Length

431 amino acids

Sequence
(BLAST)

001: VDDVCISVNS SKVIGCNATF SSGLPIVSTG VLCAKASMLL QDVSPPSLLQ FLREHRSQWA DSNLDAFFAS TMKPNFCNLP MSRLGGFSGQ VILPLAHTFE
101: PEEFLEVIKL GNASNYQDTL VHRDLFLLQM YNGVEESSAG TCSELIFAPI DASFSDDSPL LPSGFRIIPI DSPLDTSSPN CTLDLASTLE AATPRSRISG
201: VNGGGGGCAA AAASSSSKAV MTIAFQFAFD GHLQDSVAAM ARQYMRNIIS SVQRIAVALS SSRLVPPGAG AAAAQLSPVT PEAATLPRWI CQSYRFHFGD
301: ELIKSVDANS SNESILKAVW HHPSAILCCS LKAMPVFTFA NQSGLDMLET TLVALQDMTL EKVFDDQGRK NLCTELPNIM EQGMACMEGG VCVSSVGRAA
401: SYEKAVAWKV VDGDGGGAHC ICFMFINWTF L

Best Arabidopsis Sequence Match ( AT1G52150.1 )
(BLAST)

001: MAMSCKDGKL GCLDNGKYVR YTPEQVEALE RLYHDCPKPS SIRRQQLIRE CPILSNIEPK QIKVWFQNRR CREKQRKEAS RLQAVNRKLT AMNKLLMEEN
101: DRLQKQVSQL VHENSYFRQH TPNPSLPAKD TSCESVVTSG QHQLASQNPQ RDASPAGLLS IAEETLAEFL SKATGTAVEW VQMPGMKPGP DSIGIIAISH
201: GCTGVAARAC GLVGLEPTRV AEIVKDRPSW FRECRAVEVM NVLPTANGGT VELLYMQLYA PTTLAPPRDF WLLRYTSVLE DGSLVVCERS LKSTQNGPSM
301: PLVQNFVRAE MLSSGYLIRP CDGGGSIIHI VDHMDLEACS VPEVLRPLYE SPKVLAQKTT MAALRQLKQI AQEVTQTNSS VNGWGRRPAA LRALSQRLSR
401: GFNEAVNGFT DEGWSVIGDS MDDVTITVNS SPDKLMGLNL TFANGFAPVS NVVLCAKASM LLQNVPPAIL LRFLREHRSE WADNNIDAYL AAAVKVGPCS
501: ARVGGFGGQV ILPLAHTIEH EEFMEVIKLE GLGHSPEDAI VPRDIFLLQL CSGMDENAVG TCAELIFAPI DASFADDAPL LPSGFRIIPL DSAKEVSSPN
601: RTLDLASALE IGSAGTKAST DQSGNSTCAR SVMTIAFEFG IESHMQEHVA SMARQYVRGI ISSVQRVALA LSPSHISSQV GLRTPLGTPE AQTLARWICQ
701: SYRGYMGVEL LKSNSDGNES ILKNLWHHTD AIICCSMKAL PVFTFANQAG LDMLETTLVA LQDISLEKIF DDNGRKTLCS EFPQIMQQGF ACLQGGICLS
801: SMGRPVSYER AVAWKVLNEE ENAHCICFVF INWSFV

Arabidopsis Description

ATHB-15Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein [Source:UniProtKB/TrEMBL;Acc:B3H4G8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.