Factsheet for Os03t0109400-02

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU93425	Sorghum	nucleus	91.54	91.21
Zm00001d027317_P015	Maize	nucleus	91.18	89.68
Zm00001d048527_P028	Maize	nucleus	90.23	89.48
TraesCS4D01G359600.1	Wheat	nucleus	88.32	88.42
HORVU4Hr1G090030.9	Barley	nucleus	87.96	88.07
TraesCS4B01G385200.1	Wheat	nucleus	87.96	87.96
TraesCS5A01G549700.1	Wheat	nucleus	87.01	87.11
Os10t0480200-01	Rice	nucleus	86.41	86.31
HORVU5Hr1G061410.29	Barley	cytosol	28.96	84.08
GSMUA_Achr5P18530_001	Banana	cytosol, nucleus, plastid	75.09	75.54
KRH29910	Soybean	cytosol, nucleus, plastid	72.23	71.97
VIT_06s0004g02800.t01	Wine grape	nucleus	72.11	71.68
KRH25015	Soybean	cytosol, nucleus, plastid	70.68	70.51
Solyc11g069470.1.1	Tomato	cytosol, nucleus, plastid	68.77	68.61
AT5G60690.1	Thale cress	cytosol, nucleus, plastid	68.65	68.41
PGSC0003DMT400020801	Potato	cytosol, nucleus, plastid	68.53	68.37
CDY31519	Canola	cytosol, nucleus, plastid	69.01	68.12
Bra002458.1-P	Field mustard	cytosol, nucleus, plastid	69.01	68.12
CDY52706	Canola	cytosol, nucleus, plastid	68.65	68.0
Zm00001d049529_P001	Maize	cytosol, plastid	15.14	66.84
Bra020236.1-P	Field mustard	nucleus	67.1	66.55
CDX99164	Canola	cytosol, nucleus, plastid	66.15	66.15
CDY09191	Canola	cytosol	58.64	66.04
Bra038295.1-P	Field mustard	cytosol, nucleus, plastid	65.55	66.03
Os03t0640800-01	Rice	plastid	66.51	64.96
Os12t0612700-01	Rice	nucleus	64.48	63.27
VIT_13s0019g04320.t01	Wine grape	nucleus	63.41	63.26
CDY31032	Canola	cytosol	57.33	62.79
CDY31031	Canola	extracellular	7.51	58.88
Os06t0722650-01	Rice	extracellular, mitochondrion, plastid	10.61	57.42
Os06t0722300-01	Rice	extracellular, mitochondrion, plastid	10.61	57.42
Os06t0720500-01	Rice	extracellular, mitochondrion, plastid	10.61	57.42
CDY27014	Canola	cytosol, plasma membrane	5.13	57.33
CDY57624	Canola	extracellular	6.2	55.91
Os01t0200300-01	Rice	cytosol, peroxisome	23.96	46.64
CDX82038	Canola	extracellular	8.46	43.83
Os03t0769800-01	Rice	plastid	4.29	14.88
Os10t0147300-02	Rice	plastid	0.83	6.42

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.2	Gene3D:3.30.530.20	EntrezGene:4331345	ProteinID:AAN61485.1	ProteinID:ABF93574.1
EMBL:AJ556802	EMBL:AK102378	EMBL:AY425991	ProteinID:BAF10621.1	ProteinID:BAS81903.1	ProteinID:BAS81905.1
ncoils:Coil	ProteinID:EAZ25309.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0008289	GO:GO:0009058	GO:GO:0009987
InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:IPR002913	InterPro:IPR023393	InterPro:MEKHLA
EnsemblPlantsGene:Os03g0109400	EnsemblPlants:Os03t0109400-02	PFAM:PF00046	PFAM:PF01852	PFAM:PF08670	PFscan:PS50071
PFscan:PS50848	PANTHER:PTHR24326	PANTHER:PTHR24326:SF326	UniProt:Q6TAQ6	SMART:SM00234	SMART:SM00389
SUPFAM:SSF46689	SUPFAM:SSF55961	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom	UniParc:UPI00001D9DB6	RefSeq:XP_015632709.1
RefSeq:XP_015632710.1	SEG:seg	:	:	:	:

Description

HOMEOBOX GENE 10Similar to cDNA clone:J033091P14, full insert sequence. (Os03t0109400-01);Homeodomain-related domain containing protein. (Os03t0109400-02);Similar to cDNA clone:J033091P14, full insert sequence. (Os03t0109400-03)

Coordinates

chr3:+:549939..557886

Molecular Weight (calculated)

91833.8 Da

IEP (calculated)

5.980

GRAVY (calculated)

-0.127

Length

839 amino acids

Sequence
(BLAST)

001: MAAAVAMRGS SSDGGGYDKV SGMDSGKYVR YTPEQVEALE RVYADCPKPT SSRRQQLLRE CPILANIEPK QIKVWFQNRR CRDKQRKESS RLQAVNRKLT
101: AMNKLLMEEN ERLQKQVSQL VHENAHMRQQ LQNTPLANDT SCESNVTTPQ NPLRDASNPS GLLSIAEETL TEFLSKATGT AIDWVQMPGM KPGPDSVGIV
201: AISHGCRGVA ARACGLVNLE PTKVVEILKD RPSWFRDCRN LEVFTMIPAG NGGTVELVYT QLYAPTTLVP ARDFWTLRYT TTMEDGSLVV CERSLSGSGG
301: GPSAASAQQY VRAEMLPSGY LVRPCEGGGS IVHIVDHLDL EAWSVPEVLR PLYESSRVVA QKMTTAALRH IRQIAQETSG EVVYALGRQP AVLRTFSQRL
401: SRGFNDAISG FNDDGWSIMG GDGVEDVVIA CNSTKKIRSN SNAGIAFGAP GGIICAKASM LLQSVPPAVL VRFLREHRSE WADYNIDAYL ASTLKTSACS
501: LTGLRPMRFS GSQIIIPLAH TVENEEILEV VRLEGQPLTH DEALLSRDIH LLQLCTGIDE KSVGSSFQLV FAPIDDFPDE TPLISSGFRV IPLDMKTDGA
601: SSGRTLDLAS SLEVGSATAQ ASGDASADDC NLRSVLTIAF QFPYELHLQD SVAAMARQYV RSIVSAVQRV SMAISPSQTG LNAGQRIISG FPEAATLARW
701: VCQSYHYHLG VELLSQSDGD AEQLLKMLWH YQDAILCCSF KEKPVFTFAN KAGLDMLETS LVALQDLTLD RIFDEPGKEA LFSNIPKLME QGHVYLPSGV
801: CMSGMGRHVS FDQAVAWKVL AEDSNVHCLA FCFVNWSFV

Best Arabidopsis Sequence Match ( AT5G60690.1 )
(BLAST)

001: MEMAVANHRE RSSDSMNRHL DSSGKYVRYT AEQVEALERV YAECPKPSSL RRQQLIRECS ILANIEPKQI KVWFQNRRCR DKQRKEASRL QSVNRKLSAM
101: NKLLMEENDR LQKQVSQLVC ENGYMKQQLT TVVNDPSCES VVTTPQHSLR DANSPAGLLS IAEETLAEFL SKATGTAVDW VQMPGMKPGP DSVGIFAISQ
201: RCNGVAARAC GLVSLEPMKI AEILKDRPSW FRDCRSLEVF TMFPAGNGGT IELVYMQTYA PTTLAPARDF WTLRYTTSLD NGSFVVCERS LSGSGAGPNA
301: ASASQFVRAE MLSSGYLIRP CDGGGSIIHI VDHLNLEAWS VPDVLRPLYE SSKVVAQKMT ISALRYIRQL AQESNGEVVY GLGRQPAVLR TFSQRLSRGF
401: NDAVNGFGDD GWSTMHCDGA EDIIVAINST KHLNNISNSL SFLGGVLCAK ASMLLQNVPP AVLIRFLREH RSEWADFNVD AYSAATLKAG SFAYPGMRPT
501: RFTGSQIIMP LGHTIEHEEM LEVVRLEGHS LAQEDAFMSR DVHLLQICTG IDENAVGACS ELIFAPINEM FPDDAPLVPS GFRVIPVDAK TGDVQDLLTA
601: NHRTLDLTSS LEVGPSPENA SGNSFSSSSS RCILTIAFQF PFENNLQENV AGMACQYVRS VISSVQRVAM AISPSGISPS LGSKLSPGSP EAVTLAQWIS
701: QSYSHHLGSE LLTIDSLGSD DSVLKLLWDH QDAILCCSLK PQPVFMFANQ AGLDMLETTL VALQDITLEK IFDESGRKAI CSDFAKLMQQ GFACLPSGIC
801: VSTMGRHVSY EQAVAWKVFA ASEENNNNLH CLAFSFVNWS FV

Arabidopsis Description

REVHomeobox-leucine zipper protein REVOLUTA [Source:UniProtKB/Swiss-Prot;Acc:Q9SE43]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.