Factsheet for GSMUA_Achr5P18530_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0480200-01	Rice	nucleus	77.22	76.67
TraesCS1A01G157500.1	Wheat	nucleus	76.98	76.43
HORVU1Hr1G041790.2	Barley	nucleus	76.98	76.43
TraesCS1B01G173900.1	Wheat	nucleus	76.98	76.43
TraesCS1D01G155200.3	Wheat	nucleus	76.5	76.13
EER94065	Sorghum	nucleus	76.14	75.78
Os03t0109400-02	Rice	nucleus	75.54	75.09
OQU93425	Sorghum	nucleus	75.42	74.7
Zm00001d048527_P028	Maize	nucleus	75.42	74.35
TraesCS4D01G359600.1	Wheat	nucleus	74.1	73.75
HORVU5Hr1G061410.29	Barley	cytosol	25.54	73.7
TraesCS5A01G549700.1	Wheat	nucleus	73.98	73.63
Zm00001d027317_P015	Maize	nucleus	75.3	73.62
HORVU4Hr1G090030.9	Barley	nucleus	73.02	72.67
VIT_06s0004g02800.t01	Wine grape	nucleus	73.38	72.51
TraesCS4B01G385200.1	Wheat	nucleus	72.78	72.35
KRH29910	Soybean	cytosol, nucleus, plastid	72.06	71.38
KRH25015	Soybean	cytosol, nucleus, plastid	71.94	71.34
Solyc11g069470.1.1	Tomato	cytosol, nucleus, plastid	70.62	70.04
CDY52706	Canola	cytosol, nucleus, plastid	71.1	70.01
Zm00001d032681_P004	Maize	cytosol, nucleus, plastid	73.14	69.95
AT5G60690.1	Thale cress	cytosol, nucleus, plastid	70.62	69.95
Bra002458.1-P	Field mustard	cytosol, nucleus, plastid	71.1	69.76
CDY31519	Canola	cytosol, nucleus, plastid	71.1	69.76
PGSC0003DMT400020801	Potato	cytosol, nucleus, plastid	70.02	69.44
Bra020236.1-P	Field mustard	nucleus	68.82	67.85
Bra038295.1-P	Field mustard	cytosol, nucleus, plastid	67.75	67.83
CDX99164	Canola	cytosol, nucleus, plastid	68.11	67.7
CDY09191	Canola	cytosol	60.19	67.38
GSMUA_Achr4P31660_001	Banana	cytosol	68.7	66.71
GSMUA_Achr2P13060_001	Banana	cytosol	6.71	66.67
GSMUA_Achr5P02420_001	Banana	cytosol	69.66	66.48
GSMUA_Achr2P13050_001	Banana	cytosol	62.11	66.33
GSMUA_Achr7P01060_001	Banana	cytosol	68.23	66.24
GSMUA_Achr8P02960_001	Banana	cytosol	66.07	65.67
CDY31032	Canola	cytosol	59.71	65.01
GSMUA_Achr4P28360_001	Banana	cytosol	70.14	65.0
VIT_13s0019g04320.t01	Wine grape	nucleus	64.51	63.97
CDY31031	Canola	extracellular	8.03	62.62
GSMUA_Achr5P06550_001	Banana	cytosol	61.99	61.62
GSMUA_Achr8P20090_001	Banana	cytosol	61.03	60.74
CDY27014	Canola	cytosol, plasma membrane	5.28	58.67
Zm00001d049529_P001	Maize	cytosol, plastid	13.31	58.42
CDY57624	Canola	extracellular	6.24	55.91
CDX82038	Canola	extracellular	8.27	42.59

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.2	Gene3D:3.30.530.20	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0007275	GO:GO:0008150	GO:GO:0008289	GO:GO:0009653	GO:GO:0009855	GO:GO:0009944
GO:GO:0009956	GO:GO:0009987	GO:GO:0010014	GO:GO:0010051	GO:GO:0010089	GO:GO:0030154
GO:GO:0043565	GO:GO:0044212	EnsemblPlantsGene:GSMUA_Achr5G18530_001	EnsemblPlants:GSMUA_Achr5P18530_001	EnsemblPlants:GSMUA_Achr5T18530_001	InterPro:Homeobox-like_sf
InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:IPR002913	InterPro:IPR023393	UniProt:M0SZN2	InterPro:MEKHLA
PFAM:PF00046	PFAM:PF01852	PFAM:PF08670	PFscan:PS50071	PFscan:PS50848	PANTHER:PTHR24326
PANTHER:PTHR24326:SF279	SMART:SM00234	SMART:SM00389	SUPFAM:SSF46689	SUPFAM:SSF55961	InterPro:START-like_dom_sf
InterPro:START_lipid-bd_dom	UniParc:UPI000295356C	SEG:seg	:	:	:

Description

Homeobox-leucine zipper protein HOX9 [Source:GMGC_GENE;Acc:GSMUA_Achr5G18530_001]

Coordinates

chr5:-:19979534..19991908

Molecular Weight (calculated)

91680.7 Da

IEP (calculated)

6.125

GRAVY (calculated)

-0.126

Length

834 amino acids

Sequence
(BLAST)

001: MAAVVAMRSG GMEKHSMDAG KYVRYTAEQV EALERVYSEC PKPSSTRRQQ LIRECPILAN IEPKQIKVWF QNRRCREKQR KETSRLQAVN RKLTAMNKLL
101: MEENERLQKQ VTQLVHENAY MRQQLQNVSL ANDTSCESIV TTPQNPLRDA NNPAGLLSIA EEALAEFLSK ATGTAVDWVQ MPGMKPGPDS IGIVAISHSS
201: SGVAARACGL VNLEPTKASS SIIKDRPAWF HDCRNLEVFT MFPTGNGGTI ELVYMQMYAP TTLAPARDFW TLRYTTSLED GSHVICERSL SGSGSGPNAT
301: TAHQFVRAEM LPSGYLIRPC EGGGSIVHIV DHLDLEAWSV PEVLRPLYES SRVVAQKMTI AALRHVRQIA QETTGEVVCA TGRQPAILRT FGQRLNRGFN
401: DAINGFTDDG WSLMGSDGMD DIVIATNSTK KTGANASSNA FASAGGVICA KASMLLQSVP PALLVRFLRE HRSEWADYNV DAYSAASLKA GVSSFSGSRP
501: NRFSGSQIIM PLAHTVENEE FLEVVRLEGQ ALIQDGAILS RDIHLLQLCC GIDENSLGAC FQLVFAPIDE LFPDDAPLLP SGFRVIPLDA KTNGLSSTRT
601: LDLASSLGVG STVNRSAGDA STDDYNLRSV LTIAFQFPYE VHLQDSIAAM ARQYVRSIVS AIQRVSMAIT RSRPGHGIGQ KLVPGSPEAV TLARWICQSY
701: NYHLGIDLLR YDGETEESLL KMLWHHQDAV LCCTFEMQPI FTFANQAGLD MLETTLVALQ DITLDKIFDE AGRKELHSEF AKLMEQGYLY LPAGTCLSGM
801: GRQVSFEQAV VWKVLGEDND VHCLGLCFVN WSFL

Best Arabidopsis Sequence Match ( AT5G60690.1 )
(BLAST)

001: MEMAVANHRE RSSDSMNRHL DSSGKYVRYT AEQVEALERV YAECPKPSSL RRQQLIRECS ILANIEPKQI KVWFQNRRCR DKQRKEASRL QSVNRKLSAM
101: NKLLMEENDR LQKQVSQLVC ENGYMKQQLT TVVNDPSCES VVTTPQHSLR DANSPAGLLS IAEETLAEFL SKATGTAVDW VQMPGMKPGP DSVGIFAISQ
201: RCNGVAARAC GLVSLEPMKI AEILKDRPSW FRDCRSLEVF TMFPAGNGGT IELVYMQTYA PTTLAPARDF WTLRYTTSLD NGSFVVCERS LSGSGAGPNA
301: ASASQFVRAE MLSSGYLIRP CDGGGSIIHI VDHLNLEAWS VPDVLRPLYE SSKVVAQKMT ISALRYIRQL AQESNGEVVY GLGRQPAVLR TFSQRLSRGF
401: NDAVNGFGDD GWSTMHCDGA EDIIVAINST KHLNNISNSL SFLGGVLCAK ASMLLQNVPP AVLIRFLREH RSEWADFNVD AYSAATLKAG SFAYPGMRPT
501: RFTGSQIIMP LGHTIEHEEM LEVVRLEGHS LAQEDAFMSR DVHLLQICTG IDENAVGACS ELIFAPINEM FPDDAPLVPS GFRVIPVDAK TGDVQDLLTA
601: NHRTLDLTSS LEVGPSPENA SGNSFSSSSS RCILTIAFQF PFENNLQENV AGMACQYVRS VISSVQRVAM AISPSGISPS LGSKLSPGSP EAVTLAQWIS
701: QSYSHHLGSE LLTIDSLGSD DSVLKLLWDH QDAILCCSLK PQPVFMFANQ AGLDMLETTL VALQDITLEK IFDESGRKAI CSDFAKLMQQ GFACLPSGIC
801: VSTMGRHVSY EQAVAWKVFA ASEENNNNLH CLAFSFVNWS FV

Arabidopsis Description

REVHomeobox-leucine zipper protein REVOLUTA [Source:UniProtKB/Swiss-Prot;Acc:Q9SE43]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.