CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
extracellular 4
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27014	Canola	cytosol, plasma membrane	45.79	65.33
CDY57624	Canola	extracellular	55.14	63.44
CDX71242	Canola	peroxisome	46.73	59.52
CDX82038	Canola	extracellular	53.27	35.19
CDY53980	Canola	cytosol, nucleus, peroxisome	44.86	30.97
CDX68901	Canola	plastid	57.01	30.2
CDX99164	Canola	cytosol, nucleus, plastid	94.39	12.04
Bra038295.1-P	Field mustard	cytosol, nucleus, plastid	93.46	12.0
CDY09191	Canola	cytosol	82.24	11.81
CDY52706	Canola	cytosol, nucleus, plastid	80.37	10.15
CDY31519	Canola	cytosol, nucleus, plastid	80.37	10.12
KRH25015	Soybean	cytosol, nucleus, plastid	71.03	9.04
KRH29910	Soybean	cytosol, nucleus, plastid	71.03	9.03
VIT_06s0004g02800.t01	Wine grape	nucleus	70.09	8.89
Solyc11g069470.1.1	Tomato	cytosol, nucleus, plastid	68.22	8.68
PGSC0003DMT400020801	Potato	cytosol, nucleus, plastid	66.36	8.44
CDY09572	Canola	cytosol, nucleus, plastid	64.49	8.21
Zm00001d048527_P028	Maize	nucleus	64.49	8.16
GSMUA_Achr5P18530_001	Banana	cytosol, nucleus, plastid	62.62	8.03
CDY43661	Canola	cytosol	60.75	8.0
CDY02297	Canola	nucleus	62.62	7.98
OQU93425	Sorghum	nucleus	62.62	7.96
CDY02553	Canola	cytosol	60.75	7.78
CDY31635	Canola	nucleus	61.68	7.77
CDX84286	Canola	cytosol	61.68	7.77
EER94065	Sorghum	nucleus	60.75	7.76
Zm00001d027317_P015	Maize	nucleus	61.68	7.74
Zm00001d032681_P004	Maize	cytosol, nucleus, plastid	62.62	7.68
CDY60592	Canola	cytosol	59.81	7.64
CDY47819	Canola	cytosol	59.81	7.64
TraesCS4D01G359600.1	Wheat	nucleus	59.81	7.64
Os10t0480200-01	Rice	nucleus	59.81	7.62
HORVU4Hr1G090030.9	Barley	nucleus	58.88	7.52
TraesCS5A01G549700.1	Wheat	nucleus	58.88	7.52
Os03t0109400-02	Rice	nucleus	58.88	7.51
TraesCS4B01G385200.1	Wheat	nucleus	58.88	7.51
TraesCS1D01G155200.3	Wheat	nucleus	57.94	7.4
TraesCS1A01G157500.1	Wheat	nucleus	57.94	7.38
TraesCS1B01G173900.1	Wheat	nucleus	57.94	7.38
HORVU1Hr1G041790.2	Barley	nucleus	57.01	7.26
Os03t0769800-01	Rice	plastid	6.54	2.89
Zm00001d049529_P001	Maize	cytosol, plastid	2.8	1.58
CDY31032	Canola	cytosol	7.48	1.04
HORVU5Hr1G061410.29	Barley	cytosol	2.8	1.04
CDY69514	Canola	nucleus	4.67	0.79
CDY45021	Canola	nucleus	3.74	0.54
CDY28273	Canola	nucleus	3.74	0.54
CDY51188	Canola	nucleus	2.8	0.42
Os10t0147300-02	Rice	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:CDY31031	EnsemblPlantsGene:GSBRNA2T00047097001	InterPro:MEKHLA	PFAM:PF08670	ProteinID:CDY31031	ProteinID:CDY31031.1
UniParc:UPI0004EEDEA1	UniProt:A0A078GZY7	MapMan:35.1	:	:	:

Description

BnaC03g55040DBnaC03g55040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZY7]

Coordinates

chrLK032266:-:453218..453623

Molecular Weight (calculated)

11987.5 Da

IEP (calculated)

4.956

GRAVY (calculated)

0.141

Length

107 amino acids

Sequence
(BLAST)

001: MALQPQPVFM FANQAGLDML ETTLVALQGI TLEKIFDESG RKALCPDFAK LMQQGFACLP SGMCVSTMGR HVSYEQAVSW KVFSDCEDNN NNRIHCLAFL
101: FANWSFL

Best Arabidopsis Sequence Match ( AT5G60690.1 )
(BLAST)

001: MEMAVANHRE RSSDSMNRHL DSSGKYVRYT AEQVEALERV YAECPKPSSL RRQQLIRECS ILANIEPKQI KVWFQNRRCR DKQRKEASRL QSVNRKLSAM
101: NKLLMEENDR LQKQVSQLVC ENGYMKQQLT TVVNDPSCES VVTTPQHSLR DANSPAGLLS IAEETLAEFL SKATGTAVDW VQMPGMKPGP DSVGIFAISQ
201: RCNGVAARAC GLVSLEPMKI AEILKDRPSW FRDCRSLEVF TMFPAGNGGT IELVYMQTYA PTTLAPARDF WTLRYTTSLD NGSFVVCERS LSGSGAGPNA
301: ASASQFVRAE MLSSGYLIRP CDGGGSIIHI VDHLNLEAWS VPDVLRPLYE SSKVVAQKMT ISALRYIRQL AQESNGEVVY GLGRQPAVLR TFSQRLSRGF
401: NDAVNGFGDD GWSTMHCDGA EDIIVAINST KHLNNISNSL SFLGGVLCAK ASMLLQNVPP AVLIRFLREH RSEWADFNVD AYSAATLKAG SFAYPGMRPT
501: RFTGSQIIMP LGHTIEHEEM LEVVRLEGHS LAQEDAFMSR DVHLLQICTG IDENAVGACS ELIFAPINEM FPDDAPLVPS GFRVIPVDAK TGDVQDLLTA
601: NHRTLDLTSS LEVGPSPENA SGNSFSSSSS RCILTIAFQF PFENNLQENV AGMACQYVRS VISSVQRVAM AISPSGISPS LGSKLSPGSP EAVTLAQWIS
701: QSYSHHLGSE LLTIDSLGSD DSVLKLLWDH QDAILCCSLK PQPVFMFANQ AGLDMLETTL VALQDITLEK IFDESGRKAI CSDFAKLMQQ GFACLPSGIC
801: VSTMGRHVSY EQAVAWKVFA ASEENNNNLH CLAFSFVNWS FV

Arabidopsis Description

REVHomeobox-leucine zipper protein REVOLUTA [Source:UniProtKB/Swiss-Prot;Acc:Q9SE43]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.