Factsheet for Bra038295.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX99164	Canola	cytosol, nucleus, plastid	98.32	97.62
CDY31031	Canola	extracellular	12.0	93.46
Bra002458.1-P	Field mustard	cytosol, nucleus, plastid	84.75	83.06
Bra020236.1-P	Field mustard	nucleus	82.59	81.32
KRH29910	Soybean	cytosol, nucleus, plastid	78.03	77.2
KRH25015	Soybean	cytosol, nucleus, plastid	77.31	76.58
VIT_06s0004g02800.t01	Wine grape	nucleus	77.07	76.07
Solyc11g069470.1.1	Tomato	cytosol, nucleus, plastid	75.15	74.44
PGSC0003DMT400020801	Potato	cytosol, nucleus, plastid	73.95	73.25
HORVU5Hr1G061410.29	Barley	cytosol	24.37	70.24
GSMUA_Achr5P18530_001	Banana	cytosol, nucleus, plastid	67.83	67.75
Os10t0480200-01	Rice	nucleus	67.59	67.02
TraesCS1B01G173900.1	Wheat	nucleus	67.23	66.67
TraesCS1A01G157500.1	Wheat	nucleus	67.23	66.67
TraesCS1D01G155200.3	Wheat	nucleus	66.99	66.59
HORVU1Hr1G041790.2	Barley	nucleus	67.11	66.55
OQU93425	Sorghum	nucleus	66.75	66.03
EER94065	Sorghum	nucleus	66.27	65.87
Zm00001d048527_P028	Maize	nucleus	66.75	65.72
Os03t0109400-02	Rice	nucleus	66.03	65.55
TraesCS4D01G359600.1	Wheat	nucleus	65.55	65.16
Zm00001d027317_P015	Maize	nucleus	66.39	64.83
TraesCS5A01G549700.1	Wheat	nucleus	65.07	64.68
HORVU4Hr1G090030.9	Barley	nucleus	64.95	64.56
TraesCS4B01G385200.1	Wheat	nucleus	64.95	64.48
Bra032394.1-P	Field mustard	cytosol, nucleus, plastid	64.47	63.93
Bra005398.1-P	Field mustard	cytosol	64.95	63.72
Bra021926.1-P	Field mustard	cytosol	64.35	63.58
Zm00001d032681_P004	Maize	cytosol, nucleus, plastid	64.59	61.7
Bra034539.1-P	Field mustard	nucleus	59.3	59.38
Bra014315.1-P	Field mustard	cytosol	59.3	59.23
Bra011392.1-P	Field mustard	cytosol	59.18	59.18
Bra018948.1-P	Field mustard	cytosol	59.42	59.07
Bra030088.1-P	Field mustard	mitochondrion	7.2	49.18
Zm00001d049529_P001	Maize	cytosol, plastid	10.08	44.21
Os03t0769800-01	Rice	plastid	4.92	16.94
Os10t0147300-02	Rice	plastid	0.84	6.42

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.2	Gene3D:3.30.530.20	EnsemblPlantsGene:Bra038295	EnsemblPlants:Bra038295.1	EnsemblPlants:Bra038295.1-P
ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0008289	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom
InterPro:IPR001356	InterPro:IPR002913	InterPro:IPR023393	UniProt:M4FB29	InterPro:MEKHLA	PFAM:PF00046
PFAM:PF01852	PFAM:PF08670	PFscan:PS50071	PFscan:PS50848	PANTHER:PTHR24326	PANTHER:PTHR24326:SF279
SMART:SM00234	SMART:SM00389	SUPFAM:SSF46689	SUPFAM:SSF55961	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom
UniParc:UPI000253EEFB	SEG:seg	:	:	:	:

Description

AT5G60690 (E=0.0) REV, IFL, IFL1 | REV (REVOLUTA); DNA binding / lipid binding / transcription factor

Coordinates

chrA06:+:11553445..11557700

Molecular Weight (calculated)

91531.3 Da

IEP (calculated)

5.640

GRAVY (calculated)

-0.112

Length

833 amino acids

Sequence
(BLAST)

001: MTVAVGNRHE SGENINRHLD SSGKYVRYTG EQVEALERVY SECPKPTSLR RQQLIRECPF LANIEPKQIK VWFQNRRKEA SRLQSVNQKL SAMNKLLMEE
101: NDRLQKQVSH LVSENGYMKQ QLTLTTLGTD ASCDSVDPTP PQHPLRDANS PAGLMAIAEE TLAEFLSKAT GTAVDWVQMP GMKPGPDSVG IFAISQKCYG
201: VAARACGLVS LEPMKIVEIL KDRPSWFRDC RSIEVFTMFP AGNGGTIELI YMQTYAPTTL APARDFWTLR YTTSLEKGSF VVCERSLSGS GAGPNATSAA
301: QFVRAEMLPS GYLIRPCDGG GSIIHIVDHI NFEGWSVPDV LRPLYESSKV VAQRMTIAAL RYVRQVAHET NGEVVYGLGR QPAVLRTFSQ RLSRGFNDAV
401: NGFNDDGWSI MHCNGAEDIT VAVNSTKHLN SFSDPLSFLG GVLCAKASML LQNVCPAVLV RFLREHRSEW ADFNVDAYSA ATLKAGAFAY SGMRPTTFTG
501: SQIIMPLGNT IEKEEMLEVV RLEGHSLVPE DSFLSRDVHL LQICTGVDED AVGACSELVF APVNEMFPDD APLVPSGFRV IPVDSKTGDA QDLLTANHRT
601: LDLTSSQDVG STPETGSSPS SRCILTIAFQ FPFENNLQEN VANMACQYVR SVISSVQRVA VALSPSGLIQ IPGSKLSPGS PEAVSLAIWI CQSYKQHFGS
701: DLLRTDSLGG DALLRQLWDH QDAILCCSLK PQPVFMFANQ AGLDMLETTL VALQDIALEK IFDESGRKAL CPDFAKLMQQ GFACLPSGMC VSTMGRHVSY
801: EQAVSWKVFS DCEDNNNNRL HCLAFLFANW SFL

Best Arabidopsis Sequence Match ( AT5G60690.1 )
(BLAST)

001: MEMAVANHRE RSSDSMNRHL DSSGKYVRYT AEQVEALERV YAECPKPSSL RRQQLIRECS ILANIEPKQI KVWFQNRRCR DKQRKEASRL QSVNRKLSAM
101: NKLLMEENDR LQKQVSQLVC ENGYMKQQLT TVVNDPSCES VVTTPQHSLR DANSPAGLLS IAEETLAEFL SKATGTAVDW VQMPGMKPGP DSVGIFAISQ
201: RCNGVAARAC GLVSLEPMKI AEILKDRPSW FRDCRSLEVF TMFPAGNGGT IELVYMQTYA PTTLAPARDF WTLRYTTSLD NGSFVVCERS LSGSGAGPNA
301: ASASQFVRAE MLSSGYLIRP CDGGGSIIHI VDHLNLEAWS VPDVLRPLYE SSKVVAQKMT ISALRYIRQL AQESNGEVVY GLGRQPAVLR TFSQRLSRGF
401: NDAVNGFGDD GWSTMHCDGA EDIIVAINST KHLNNISNSL SFLGGVLCAK ASMLLQNVPP AVLIRFLREH RSEWADFNVD AYSAATLKAG SFAYPGMRPT
501: RFTGSQIIMP LGHTIEHEEM LEVVRLEGHS LAQEDAFMSR DVHLLQICTG IDENAVGACS ELIFAPINEM FPDDAPLVPS GFRVIPVDAK TGDVQDLLTA
601: NHRTLDLTSS LEVGPSPENA SGNSFSSSSS RCILTIAFQF PFENNLQENV AGMACQYVRS VISSVQRVAM AISPSGISPS LGSKLSPGSP EAVTLAQWIS
701: QSYSHHLGSE LLTIDSLGSD DSVLKLLWDH QDAILCCSLK PQPVFMFANQ AGLDMLETTL VALQDITLEK IFDESGRKAI CSDFAKLMQQ GFACLPSGIC
801: VSTMGRHVSY EQAVAWKVFA ASEENNNNLH CLAFSFVNWS FV

Arabidopsis Description

REVHomeobox-leucine zipper protein REVOLUTA [Source:UniProtKB/Swiss-Prot;Acc:Q9SE43]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.