Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G549700.1 | Wheat | nucleus | 97.14 | 97.14 |
| TraesCS4B01G385200.1 | Wheat | nucleus | 96.9 | 96.78 |
| HORVU4Hr1G090030.9 | Barley | nucleus | 95.94 | 95.94 |
| HORVU5Hr1G061410.29 | Barley | cytosol | 30.79 | 89.27 |
| Os03t0109400-02 | Rice | nucleus | 88.42 | 88.32 |
| OQU93425 | Sorghum | nucleus | 86.75 | 86.34 |
| Zm00001d048527_P028 | Maize | nucleus | 86.04 | 85.22 |
| Zm00001d027317_P015 | Maize | nucleus | 86.63 | 85.11 |
| TraesCS1D01G155200.3 | Wheat | nucleus | 82.34 | 82.34 |
| GSMUA_Achr5P18530_001 | Banana | cytosol, nucleus, plastid | 73.75 | 74.1 |
| KRH29910 | Soybean | cytosol, nucleus, plastid | 70.05 | 69.72 |
| VIT_06s0004g02800.t01 | Wine grape | nucleus | 69.81 | 69.31 |
| KRH25015 | Soybean | cytosol, nucleus, plastid | 68.97 | 68.73 |
| AT5G60690.1 | Thale cress | cytosol, nucleus, plastid | 67.78 | 67.46 |
| Bra002458.1-P | Field mustard | cytosol, nucleus, plastid | 68.14 | 67.18 |
| CDY31519 | Canola | cytosol, nucleus, plastid | 68.14 | 67.18 |
| CDY52706 | Canola | cytosol, nucleus, plastid | 67.78 | 67.06 |
| Solyc11g069470.1.1 | Tomato | cytosol, nucleus, plastid | 66.95 | 66.71 |
| PGSC0003DMT400020801 | Potato | cytosol, nucleus, plastid | 66.83 | 66.59 |
| CDX99164 | Canola | cytosol, nucleus, plastid | 65.63 | 65.55 |
| Bra038295.1-P | Field mustard | cytosol, nucleus, plastid | 65.16 | 65.55 |
| Bra020236.1-P | Field mustard | nucleus | 65.63 | 65.01 |
| CDY09191 | Canola | cytosol | 57.76 | 64.97 |
| Zm00001d049529_P001 | Maize | cytosol, plastid | 14.44 | 63.68 |
| TraesCS5D01G385300.1 | Wheat | cytosol, nucleus, plastid | 64.92 | 63.11 |
| CDY31032 | Canola | cytosol | 56.56 | 61.88 |
| VIT_13s0019g04320.t01 | Wine grape | nucleus | 62.05 | 61.83 |
| CDY31031 | Canola | extracellular | 7.64 | 59.81 |
| TraesCS5D01G052300.1 | Wheat | mitochondrion, plastid | 63.01 | 59.8 |
| CDY27014 | Canola | cytosol, plasma membrane | 5.01 | 56.0 |
| CDY57624 | Canola | extracellular | 6.09 | 54.84 |
| TraesCS3D01G141500.2 | Wheat | nucleus | 56.56 | 53.74 |
| CDX82038 | Canola | extracellular | 8.0 | 41.36 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.2 | Gene3D:3.30.530.20 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0008289 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:IPR002913 | InterPro:IPR023393 | InterPro:MEKHLA | PFAM:PF00046 | PFAM:PF01852 | PFAM:PF08670 |
| PFscan:PS50071 | PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF326 | SMART:SM00234 | SMART:SM00389 |
| SUPFAM:SSF46689 | SUPFAM:SSF55961 | InterPro:START-like_dom_sf | InterPro:START_lipid-bd_dom | EnsemblPlantsGene:TraesCS4D01G359600 | EnsemblPlants:TraesCS4D01G359600.1 |
| TIGR:cd00086 | TIGR:cd08875 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr4D:+:506968051..506975377
Molecular Weight (calculated)
91596.6 Da
IEP (calculated)
5.684
GRAVY (calculated)
-0.070
Length
838 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAMAMRGG SSDGGGSDRG AGMDSGKYVR YTPEQVETLE RVYADCPKPT SSRRQQLLRE CPILANIEAR QIKVWFQNRR CRDKLRKESS RLESVNRKVS
101: AMNKLLMEEN ERLQKQVSQL VHENAQVRQQ LQNTSMANDA SCESNVTTPQ NPIRDASNPS GLLSIAEETL TEFLSKATGT AIEWVQMPGM KPGPDSVGIV
201: AISHGCRGVA ARACGLVNLE PTKVVEILKD RPSWFRDCRS LEVFTVLPGA NGGTIELVYT QLYAPTTLVP ARDFWTLRYT TIVEDGSLVV CERSLSGSGG
301: GPSAASAQQF VRAEMLPSGY LVRPCDGGGS IVHIVDHLEF EAWNIPEVLR PLYESSRVVA QKMTTAALRH IRQIAQETSG EVVYALGRQP AVLRTFSQRL
401: SRGFNDAISG FNDDGWSIMA GDGIEDVVVA CNSTKKIRNV SNGVNAFEAL GGTICAKASM LLQSVPPAIL VRFLREHRSE WADYSMDAYL ASAVKTSTCS
501: FPGLRPMRFS GSQIIMPLAH TVENEEILEV VRLEGQPLSH DEVLLSRDID MLQLCTGIDE KSVGSSFQLV FAPIDDFPDD APLVSSGFRV IPLDMKTDVV
601: SSGRTLDLAS SLEVGSTAAQ ASGASPDDCN VRSVLTIAFQ FPYELHLQDS VAAMARQYVR SIVSAVQRVS IAISPSQSGL NAGQRILSGL PEAATLARWI
701: CQSYHYHLGV ELLTQSDVAG EALLKMLWHY QDAILCCSFK EVPVFTFANK AGLDMLETSL VALQDLTLDK IFDEPGRKAL FSEISKLVEE GHVYLPSGVC
801: MSGMGRHVSF DQAVAWKVLG EDSRVHCLAL CFVNWSFV
101: AMNKLLMEEN ERLQKQVSQL VHENAQVRQQ LQNTSMANDA SCESNVTTPQ NPIRDASNPS GLLSIAEETL TEFLSKATGT AIEWVQMPGM KPGPDSVGIV
201: AISHGCRGVA ARACGLVNLE PTKVVEILKD RPSWFRDCRS LEVFTVLPGA NGGTIELVYT QLYAPTTLVP ARDFWTLRYT TIVEDGSLVV CERSLSGSGG
301: GPSAASAQQF VRAEMLPSGY LVRPCDGGGS IVHIVDHLEF EAWNIPEVLR PLYESSRVVA QKMTTAALRH IRQIAQETSG EVVYALGRQP AVLRTFSQRL
401: SRGFNDAISG FNDDGWSIMA GDGIEDVVVA CNSTKKIRNV SNGVNAFEAL GGTICAKASM LLQSVPPAIL VRFLREHRSE WADYSMDAYL ASAVKTSTCS
501: FPGLRPMRFS GSQIIMPLAH TVENEEILEV VRLEGQPLSH DEVLLSRDID MLQLCTGIDE KSVGSSFQLV FAPIDDFPDD APLVSSGFRV IPLDMKTDVV
601: SSGRTLDLAS SLEVGSTAAQ ASGASPDDCN VRSVLTIAFQ FPYELHLQDS VAAMARQYVR SIVSAVQRVS IAISPSQSGL NAGQRILSGL PEAATLARWI
701: CQSYHYHLGV ELLTQSDVAG EALLKMLWHY QDAILCCSFK EVPVFTFANK AGLDMLETSL VALQDLTLDK IFDEPGRKAL FSEISKLVEE GHVYLPSGVC
801: MSGMGRHVSF DQAVAWKVLG EDSRVHCLAL CFVNWSFV
001: MAMSCKDGKL GCLDNGKYVR YTPEQVEALE RLYHDCPKPS SIRRQQLIRE CPILSNIEPK QIKVWFQNRR CREKQRKEAS RLQAVNRKLT AMNKLLMEEN
101: DRLQKQVSQL VHENSYFRQH TPNPSLPAKD TSCESVVTSG QHQLASQNPQ RDASPAGLLS IAEETLAEFL SKATGTAVEW VQMPGMKPGP DSIGIIAISH
201: GCTGVAARAC GLVGLEPTRV AEIVKDRPSW FRECRAVEVM NVLPTANGGT VELLYMQLYA PTTLAPPRDF WLLRYTSVLE DGSLVVCERS LKSTQNGPSM
301: PLVQNFVRAE MLSSGYLIRP CDGGGSIIHI VDHMDLEACS VPEVLRPLYE SPKVLAQKTT MAALRQLKQI AQEVTQTNSS VNGWGRRPAA LRALSQRLSR
401: GFNEAVNGFT DEGWSVIGDS MDDVTITVNS SPDKLMGLNL TFANGFAPVS NVVLCAKASM LLQNVPPAIL LRFLREHRSE WADNNIDAYL AAAVKVGPCS
501: ARVGGFGGQV ILPLAHTIEH EEFMEVIKLE GLGHSPEDAI VPRDIFLLQL CSGMDENAVG TCAELIFAPI DASFADDAPL LPSGFRIIPL DSAKEVSSPN
601: RTLDLASALE IGSAGTKAST DQSGNSTCAR SVMTIAFEFG IESHMQEHVA SMARQYVRGI ISSVQRVALA LSPSHISSQV GLRTPLGTPE AQTLARWICQ
701: SYRGYMGVEL LKSNSDGNES ILKNLWHHTD AIICCSMKAL PVFTFANQAG LDMLETTLVA LQDISLEKIF DDNGRKTLCS EFPQIMQQGF ACLQGGICLS
801: SMGRPVSYER AVAWKVLNEE ENAHCICFVF INWSFV
101: DRLQKQVSQL VHENSYFRQH TPNPSLPAKD TSCESVVTSG QHQLASQNPQ RDASPAGLLS IAEETLAEFL SKATGTAVEW VQMPGMKPGP DSIGIIAISH
201: GCTGVAARAC GLVGLEPTRV AEIVKDRPSW FRECRAVEVM NVLPTANGGT VELLYMQLYA PTTLAPPRDF WLLRYTSVLE DGSLVVCERS LKSTQNGPSM
301: PLVQNFVRAE MLSSGYLIRP CDGGGSIIHI VDHMDLEACS VPEVLRPLYE SPKVLAQKTT MAALRQLKQI AQEVTQTNSS VNGWGRRPAA LRALSQRLSR
401: GFNEAVNGFT DEGWSVIGDS MDDVTITVNS SPDKLMGLNL TFANGFAPVS NVVLCAKASM LLQNVPPAIL LRFLREHRSE WADNNIDAYL AAAVKVGPCS
501: ARVGGFGGQV ILPLAHTIEH EEFMEVIKLE GLGHSPEDAI VPRDIFLLQL CSGMDENAVG TCAELIFAPI DASFADDAPL LPSGFRIIPL DSAKEVSSPN
601: RTLDLASALE IGSAGTKAST DQSGNSTCAR SVMTIAFEFG IESHMQEHVA SMARQYVRGI ISSVQRVALA LSPSHISSQV GLRTPLGTPE AQTLARWICQ
701: SYRGYMGVEL LKSNSDGNES ILKNLWHHTD AIICCSMKAL PVFTFANQAG LDMLETTLVA LQDISLEKIF DDNGRKTLCS EFPQIMQQGF ACLQGGICLS
801: SMGRPVSYER AVAWKVLNEE ENAHCICFVF INWSFV
Arabidopsis Description
ATHB-15Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein [Source:UniProtKB/TrEMBL;Acc:B3H4G8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.