Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G60690.1 | CDY08392 | AT1G64620.1 | 21245844 |
| AT5G60690.1 | CDY70840 | AT1G64620.1 | 21245844 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020236.1-P | Field mustard | nucleus | 97.85 | 86.17 |
| CDY31031 | Canola | extracellular | 11.81 | 82.24 |
| AT5G60690.1 | Thale cress | cytosol, nucleus, plastid | 92.48 | 81.83 |
| CDY31519 | Canola | cytosol, nucleus, plastid | 92.75 | 81.29 |
| CDY52706 | Canola | cytosol, nucleus, plastid | 91.68 | 80.64 |
| CDY27014 | Canola | cytosol, plasma membrane | 7.52 | 74.67 |
| CDY57624 | Canola | extracellular | 9.26 | 74.19 |
| CDX99164 | Canola | cytosol, nucleus, plastid | 80.54 | 71.51 |
| KRH29910 | Soybean | cytosol, nucleus, plastid | 79.73 | 70.55 |
| VIT_06s0004g02800.t01 | Wine grape | nucleus | 79.46 | 70.14 |
| KRH25015 | Soybean | cytosol, nucleus, plastid | 78.93 | 69.92 |
| HORVU5Hr1G061410.29 | Barley | cytosol | 27.11 | 69.9 |
| CDX71242 | Canola | peroxisome | 7.79 | 69.05 |
| Solyc11g069470.1.1 | Tomato | cytosol, nucleus, plastid | 76.91 | 68.13 |
| PGSC0003DMT400020801 | Potato | cytosol, nucleus, plastid | 76.51 | 67.78 |
| CDY31032 | Canola | cytosol | 68.05 | 66.19 |
| GSMUA_Achr5P18530_001 | Banana | cytosol, nucleus, plastid | 67.38 | 60.19 |
| Os10t0480200-01 | Rice | nucleus | 67.25 | 59.64 |
| CDX68901 | Canola | plastid | 16.11 | 59.41 |
| TraesCS1A01G157500.1 | Wheat | nucleus | 66.71 | 59.17 |
| TraesCS1B01G173900.1 | Wheat | nucleus | 66.71 | 59.17 |
| HORVU1Hr1G041790.2 | Barley | nucleus | 66.71 | 59.17 |
| TraesCS1D01G155200.3 | Wheat | nucleus | 66.04 | 58.71 |
| Os03t0109400-02 | Rice | nucleus | 66.04 | 58.64 |
| EER94065 | Sorghum | nucleus | 65.91 | 58.59 |
| OQU93425 | Sorghum | nucleus | 66.04 | 58.43 |
| Zm00001d048527_P028 | Maize | nucleus | 66.31 | 58.39 |
| TraesCS5A01G549700.1 | Wheat | nucleus | 65.1 | 57.88 |
| TraesCS4D01G359600.1 | Wheat | nucleus | 64.97 | 57.76 |
| TraesCS4B01G385200.1 | Wheat | nucleus | 64.7 | 57.45 |
| Zm00001d027317_P015 | Maize | nucleus | 65.77 | 57.44 |
| HORVU4Hr1G090030.9 | Barley | nucleus | 64.56 | 57.4 |
| CDY43661 | Canola | cytosol | 61.34 | 56.21 |
| CDY09572 | Canola | cytosol, nucleus, plastid | 62.95 | 55.83 |
| CDY02297 | Canola | nucleus | 62.95 | 55.83 |
| CDY31635 | Canola | nucleus | 63.22 | 55.48 |
| CDX84286 | Canola | cytosol | 62.82 | 55.12 |
| Zm00001d032681_P004 | Maize | cytosol, nucleus, plastid | 63.89 | 54.59 |
| CDY47819 | Canola | cytosol | 60.81 | 54.06 |
| CDY02553 | Canola | cytosol | 60.4 | 53.89 |
| CDY60592 | Canola | cytosol | 60.54 | 53.82 |
| CDY51188 | Canola | nucleus | 49.53 | 51.18 |
| CDY28273 | Canola | nucleus | 50.07 | 50.54 |
| CDY45021 | Canola | nucleus | 50.07 | 50.54 |
| CDY69514 | Canola | nucleus | 42.55 | 50.32 |
| CDX82038 | Canola | extracellular | 10.74 | 49.38 |
| Zm00001d049529_P001 | Maize | cytosol, plastid | 11.95 | 46.84 |
| CDY53980 | Canola | cytosol, nucleus, peroxisome | 9.13 | 43.87 |
| Os03t0769800-01 | Rice | plastid | 4.83 | 14.88 |
| Os10t0147300-02 | Rice | plastid | 0.94 | 6.42 |
Protein Annotations
| MapMan:15.5.3.2 | Gene3D:3.30.530.20 | GO:A0A078F730 | UniProt:A0A078F730 | EnsemblPlants:CDY09191 | ProteinID:CDY09191 |
| ProteinID:CDY09191.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008289 | EnsemblPlantsGene:GSBRNA2T00001430001 |
| InterPro:IPR002913 | InterPro:IPR023393 | InterPro:MEKHLA | PFAM:PF01852 | PFAM:PF08670 | PFscan:PS50848 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF279 | SMART:SM00234 | SUPFAM:SSF55961 | InterPro:START-like_dom_sf | InterPro:START_lipid-bd_dom |
| UniParc:UPI0004EDF329 | SEG:seg | : | : | : | : |
Description
BnaA02g06170DBnaA02g06170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F730]
Coordinates
chrLK031993:-:585376..589180
Molecular Weight (calculated)
81067.6 Da
IEP (calculated)
4.983
GRAVY (calculated)
0.003
Length
745 amino acids
Sequence
(BLAST)
(BLAST)
001: MNKLLMEEND RLQKQVSQLV CENGYMKQQL TTVVNDVSCD SVVTTPQHSL RDANSHAGLI SIAEETLAEF LSKATGTAVD WVQMPGMKPG PDSVGIFAIS
101: QRCSGVAARA CGLVSLEPLK IAEILKDRPS WYRECRSLEV YTMFPAGNGG TIELVYMQTY APTTLAPARD FWTLRYTTSL DNGSYVVCER SLSGSGAGPS
201: PASASQFVRA EMLSSGYLIR PCDGGGSIIH IVDHLNLEAW SVPDVLRPLY ESSKVVAQKM TISALRYIRQ LAQESNGELV YGLGKQPAVL RTFSQRLSRG
301: FNDAVNGFGD DGWSTMHCDG AEDIILAINS TKHLSNISSS LSFLGGVLCA KATMLLQNVP PAVLIQFLRE HRSEWADFHV DAYSAATLKA GSFAYPGVRP
401: TRFTGSQIIM PLGHTIEHEE MLEVVRLEGH SLAQEDAFMS RDVHLLQICT GIDENAVGAC SELIFAPINE IFPDDAPLVP SGFRVIPIDA KTGDAQDLIT
501: SNHRTLDLTS SLEVGPSPET ASGNSSSSCS SSRCILTIAF QFPFEPNLQE NVAGMACQYV RSVISSVQRV AMAISPSGIS PGLGSKLSPG SPEAVTLSQW
601: ISQSYTHHFG SELVTIDSLE SNDSVLKLIW NHQDAILCCT LKPQPVFMFA NQAGLDMLET TLVALQDITL EKIFDESGRK ALCSDFAKLM QQGFACLPSG
701: ICLSTMGRHV TYEQAVAWKV FAFENDNNNN NLHCLAFSFV NWSFV
101: QRCSGVAARA CGLVSLEPLK IAEILKDRPS WYRECRSLEV YTMFPAGNGG TIELVYMQTY APTTLAPARD FWTLRYTTSL DNGSYVVCER SLSGSGAGPS
201: PASASQFVRA EMLSSGYLIR PCDGGGSIIH IVDHLNLEAW SVPDVLRPLY ESSKVVAQKM TISALRYIRQ LAQESNGELV YGLGKQPAVL RTFSQRLSRG
301: FNDAVNGFGD DGWSTMHCDG AEDIILAINS TKHLSNISSS LSFLGGVLCA KATMLLQNVP PAVLIQFLRE HRSEWADFHV DAYSAATLKA GSFAYPGVRP
401: TRFTGSQIIM PLGHTIEHEE MLEVVRLEGH SLAQEDAFMS RDVHLLQICT GIDENAVGAC SELIFAPINE IFPDDAPLVP SGFRVIPIDA KTGDAQDLIT
501: SNHRTLDLTS SLEVGPSPET ASGNSSSSCS SSRCILTIAF QFPFEPNLQE NVAGMACQYV RSVISSVQRV AMAISPSGIS PGLGSKLSPG SPEAVTLSQW
601: ISQSYTHHFG SELVTIDSLE SNDSVLKLIW NHQDAILCCT LKPQPVFMFA NQAGLDMLET TLVALQDITL EKIFDESGRK ALCSDFAKLM QQGFACLPSG
701: ICLSTMGRHV TYEQAVAWKV FAFENDNNNN NLHCLAFSFV NWSFV
001: MEMAVANHRE RSSDSMNRHL DSSGKYVRYT AEQVEALERV YAECPKPSSL RRQQLIRECS ILANIEPKQI KVWFQNRRCR DKQRKEASRL QSVNRKLSAM
101: NKLLMEENDR LQKQVSQLVC ENGYMKQQLT TVVNDPSCES VVTTPQHSLR DANSPAGLLS IAEETLAEFL SKATGTAVDW VQMPGMKPGP DSVGIFAISQ
201: RCNGVAARAC GLVSLEPMKI AEILKDRPSW FRDCRSLEVF TMFPAGNGGT IELVYMQTYA PTTLAPARDF WTLRYTTSLD NGSFVVCERS LSGSGAGPNA
301: ASASQFVRAE MLSSGYLIRP CDGGGSIIHI VDHLNLEAWS VPDVLRPLYE SSKVVAQKMT ISALRYIRQL AQESNGEVVY GLGRQPAVLR TFSQRLSRGF
401: NDAVNGFGDD GWSTMHCDGA EDIIVAINST KHLNNISNSL SFLGGVLCAK ASMLLQNVPP AVLIRFLREH RSEWADFNVD AYSAATLKAG SFAYPGMRPT
501: RFTGSQIIMP LGHTIEHEEM LEVVRLEGHS LAQEDAFMSR DVHLLQICTG IDENAVGACS ELIFAPINEM FPDDAPLVPS GFRVIPVDAK TGDVQDLLTA
601: NHRTLDLTSS LEVGPSPENA SGNSFSSSSS RCILTIAFQF PFENNLQENV AGMACQYVRS VISSVQRVAM AISPSGISPS LGSKLSPGSP EAVTLAQWIS
701: QSYSHHLGSE LLTIDSLGSD DSVLKLLWDH QDAILCCSLK PQPVFMFANQ AGLDMLETTL VALQDITLEK IFDESGRKAI CSDFAKLMQQ GFACLPSGIC
801: VSTMGRHVSY EQAVAWKVFA ASEENNNNLH CLAFSFVNWS FV
101: NKLLMEENDR LQKQVSQLVC ENGYMKQQLT TVVNDPSCES VVTTPQHSLR DANSPAGLLS IAEETLAEFL SKATGTAVDW VQMPGMKPGP DSVGIFAISQ
201: RCNGVAARAC GLVSLEPMKI AEILKDRPSW FRDCRSLEVF TMFPAGNGGT IELVYMQTYA PTTLAPARDF WTLRYTTSLD NGSFVVCERS LSGSGAGPNA
301: ASASQFVRAE MLSSGYLIRP CDGGGSIIHI VDHLNLEAWS VPDVLRPLYE SSKVVAQKMT ISALRYIRQL AQESNGEVVY GLGRQPAVLR TFSQRLSRGF
401: NDAVNGFGDD GWSTMHCDGA EDIIVAINST KHLNNISNSL SFLGGVLCAK ASMLLQNVPP AVLIRFLREH RSEWADFNVD AYSAATLKAG SFAYPGMRPT
501: RFTGSQIIMP LGHTIEHEEM LEVVRLEGHS LAQEDAFMSR DVHLLQICTG IDENAVGACS ELIFAPINEM FPDDAPLVPS GFRVIPVDAK TGDVQDLLTA
601: NHRTLDLTSS LEVGPSPENA SGNSFSSSSS RCILTIAFQF PFENNLQENV AGMACQYVRS VISSVQRVAM AISPSGISPS LGSKLSPGSP EAVTLAQWIS
701: QSYSHHLGSE LLTIDSLGSD DSVLKLLWDH QDAILCCSLK PQPVFMFANQ AGLDMLETTL VALQDITLEK IFDESGRKAI CSDFAKLMQQ GFACLPSGIC
801: VSTMGRHVSY EQAVAWKVFA ASEENNNNLH CLAFSFVNWS FV
Arabidopsis Description
REVHomeobox-leucine zipper protein REVOLUTA [Source:UniProtKB/Swiss-Prot;Acc:Q9SE43]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.