Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08392 | Canola | nucleus | 92.92 | 31.07 |
| Bra027722.1-P | Field mustard | nucleus | 86.73 | 30.25 |
| VIT_02s0025g02250.t01 | Wine grape | nucleus | 71.68 | 28.12 |
| AT1G64620.1 | Thale cress | nucleus | 84.96 | 27.27 |
| CDY07781 | Canola | nucleus | 47.79 | 25.23 |
| CDY71684 | Canola | nucleus | 72.57 | 24.48 |
| CDX92613 | Canola | nucleus | 72.57 | 23.91 |
| CDY71763 | Canola | nucleus | 72.57 | 23.91 |
| CDY03494 | Canola | nucleus | 71.68 | 23.55 |
| CDY08775 | Canola | nucleus | 40.71 | 23.47 |
| CDY35454 | Canola | nucleus | 70.8 | 23.39 |
| CDY29082 | Canola | nucleus | 48.67 | 22.92 |
| CDX80191 | Canola | nucleus | 51.33 | 22.57 |
| CDY09221 | Canola | nucleus | 51.33 | 22.48 |
| CDY31568 | Canola | nucleus | 51.33 | 22.48 |
| CDX90602 | Canola | nucleus | 47.79 | 22.41 |
| CDX78095 | Canola | nucleus | 46.9 | 21.9 |
| CDX71050 | Canola | nucleus | 47.79 | 21.34 |
| CDY64622 | Canola | nucleus | 60.18 | 21.05 |
| CDY59600 | Canola | nucleus | 45.13 | 20.9 |
| CDX71704 | Canola | nucleus | 61.06 | 20.6 |
| CDY53379 | Canola | nucleus | 39.82 | 20.55 |
| CDX87189 | Canola | nucleus | 45.13 | 20.4 |
| CDX86775 | Canola | nucleus | 55.75 | 20.26 |
| CDY51722 | Canola | nucleus | 49.56 | 20.14 |
| CDY07156 | Canola | nucleus | 49.56 | 20.07 |
| CDX80030 | Canola | nucleus | 63.72 | 19.78 |
| CDY50231 | Canola | nucleus | 44.25 | 19.76 |
| CDY41539 | Canola | nucleus | 63.72 | 19.67 |
| CDX89134 | Canola | extracellular, vacuole | 60.18 | 19.54 |
| CDX88742 | Canola | nucleus | 47.79 | 19.49 |
| CDY04620 | Canola | nucleus | 43.36 | 19.29 |
| CDX95706 | Canola | nucleus | 62.83 | 19.24 |
| CDY00373 | Canola | nucleus | 44.25 | 19.23 |
| CDY61064 | Canola | nucleus | 44.25 | 19.16 |
| CDY57876 | Canola | nucleus | 61.06 | 19.11 |
| CDX83357 | Canola | nucleus | 62.83 | 18.98 |
| CDY72657 | Canola | nucleus | 48.67 | 18.84 |
| CDX79743 | Canola | nucleus | 48.67 | 18.77 |
| CDY16836 | Canola | nucleus | 44.25 | 18.73 |
| CDY61727 | Canola | nucleus | 61.95 | 18.72 |
| CDY40813 | Canola | nucleus | 46.02 | 18.37 |
| CDX73385 | Canola | nucleus | 48.67 | 18.21 |
| CDY65260 | Canola | nucleus | 49.56 | 18.12 |
| CDY16754 | Canola | nucleus | 53.98 | 17.94 |
| CDX87270 | Canola | nucleus | 53.98 | 17.89 |
| CDY42836 | Canola | nucleus | 45.13 | 17.83 |
| CDX93365 | Canola | nucleus | 48.67 | 17.8 |
| CDY27314 | Canola | nucleus | 56.64 | 17.78 |
| CDY02191 | Canola | nucleus | 46.02 | 17.69 |
| CDX77184 | Canola | nucleus | 39.82 | 17.58 |
| CDY69145 | Canola | nucleus, plastid | 48.67 | 17.46 |
| CDY00341 | Canola | nucleus | 55.75 | 17.12 |
| CDY24798 | Canola | nucleus | 68.14 | 17.0 |
| CDX84369 | Canola | nucleus | 55.75 | 16.98 |
| CDX74947 | Canola | nucleus | 48.67 | 16.92 |
| CDX91370 | Canola | nucleus | 48.67 | 16.92 |
| CDY15624 | Canola | nucleus | 49.56 | 16.77 |
| CDX77212 | Canola | nucleus | 49.56 | 16.47 |
| CDY31735 | Canola | nucleus | 49.56 | 16.28 |
| CDY40358 | Canola | nucleus | 47.79 | 16.22 |
| CDY37834 | Canola | nucleus | 43.36 | 16.12 |
| CDX95139 | Canola | nucleus | 47.79 | 16.07 |
| CDY70838 | Canola | nucleus | 43.36 | 16.01 |
| CDY33948 | Canola | nucleus | 42.48 | 15.89 |
| CDY35729 | Canola | nucleus | 41.59 | 15.72 |
| CDY70312 | Canola | nucleus | 38.94 | 15.49 |
| CDX81292 | Canola | nucleus | 38.05 | 15.25 |
| CDY72049 | Canola | nucleus | 39.82 | 15.15 |
| CDY70666 | Canola | nucleus | 39.82 | 15.15 |
| CDX76102 | Canola | nucleus | 50.44 | 14.96 |
| CDY40213 | Canola | nucleus | 46.9 | 14.93 |
| CDX90142 | Canola | nucleus | 41.59 | 14.87 |
| CDY70704 | Canola | nucleus | 47.79 | 14.79 |
| CDY61965 | Canola | nucleus | 39.82 | 14.47 |
| CDY06274 | Canola | nucleus | 38.94 | 14.01 |
| CDY55549 | Canola | nucleus | 48.67 | 13.68 |
| CDX80822 | Canola | nucleus | 48.67 | 13.55 |
| CDY66590 | Canola | nucleus | 38.94 | 13.46 |
| CDY15678 | Canola | nucleus | 38.94 | 13.46 |
| CDY55422 | Canola | nucleus | 46.9 | 13.22 |
| CDY04855 | Canola | nucleus | 46.9 | 13.05 |
| CDY08776 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078JWQ9 | UniProt:A0A078JWQ9 | EnsemblPlants:CDY70840 | ProteinID:CDY70840 | ProteinID:CDY70840.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00007906001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF42 | UniParc:UPI0004EDB6F0 | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
BnaAnng35190DBnaAnng35190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JWQ9]
Coordinates
chrLK043482:+:75..1038
Molecular Weight (calculated)
12757.0 Da
IEP (calculated)
9.916
GRAVY (calculated)
-1.066
Length
113 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTAKWPQEF IVKPMNETCL KQPNPATAPV EEKKARPEKD HALNCPRCNS LNTKFCYYNN YSLTQPRYFC KDCKRYWTQG GSLRNIPIGG GLRKNKRPSS
101: SSSSSSNSNS SSS
101: SSSSSSNSNS SSS
001: MDTAKWPQEF VVKPMNEIVT NTCLKQQSNP PSPATPVERK ARPEKDQALN CPRCNSLNTK FCYYNNYSLT QPRYFCKDCR RYWTAGGSLR NIPVGGGVRK
101: NKRSSSNSSS SSPSSSSSSK KPLFANNNTP TPPLPHLNPK IGEAAATKVQ DLTFSQGFGN AHEVKDLNLA FSQGFGIGHN HHSSIPEFLQ VVPSSSMKNN
201: PLVSTSSSLE LLGISSSSAS SNSRPAFMSY PNVHDSSVYT ASGFGLSYPQ FQEFMRPALG FSLDGGDPLR QEEGSSGTNN GRPLLPFESL LKLPVSSSST
301: NSGGNGNLKE NNDEHSDHEH EKEEGEADQS VGFWSGMLSA GASAAASGGS WQ
101: NKRSSSNSSS SSPSSSSSSK KPLFANNNTP TPPLPHLNPK IGEAAATKVQ DLTFSQGFGN AHEVKDLNLA FSQGFGIGHN HHSSIPEFLQ VVPSSSMKNN
201: PLVSTSSSLE LLGISSSSAS SNSRPAFMSY PNVHDSSVYT ASGFGLSYPQ FQEFMRPALG FSLDGGDPLR QEEGSSGTNN GRPLLPFESL LKLPVSSSST
301: NSGGNGNLKE NNDEHSDHEH EKEEGEADQS VGFWSGMLSA GASAAASGGS WQ
Arabidopsis Description
DOF1.8Dof zinc finger protein DOF1.8 [Source:UniProtKB/Swiss-Prot;Acc:Q84JQ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.