Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030089.1-P | Field mustard | nucleus | 90.83 | 99.66 |
| CDY66590 | Canola | nucleus | 95.72 | 95.72 |
| AT1G28310.2 | Thale cress | nucleus | 87.46 | 85.37 |
| CDY70666 | Canola | nucleus | 76.76 | 84.51 |
| CDY72049 | Canola | nucleus | 76.15 | 83.84 |
| CDX90142 | Canola | nucleus | 79.51 | 82.28 |
| CDY35729 | Canola | nucleus | 70.95 | 77.59 |
| CDY70840 | Canola | nucleus | 13.46 | 38.94 |
| CDY08775 | Canola | nucleus | 17.43 | 29.08 |
| CDY07781 | Canola | nucleus | 18.04 | 27.57 |
| VIT_10s0003g00040.t01 | Wine grape | nucleus | 23.55 | 25.0 |
| CDX73385 | Canola | nucleus | 22.63 | 24.5 |
| CDX87189 | Canola | nucleus | 18.65 | 24.4 |
| CDY70312 | Canola | nucleus | 21.1 | 24.3 |
| KRH10907 | Soybean | nucleus | 25.99 | 24.08 |
| CDY31568 | Canola | nucleus | 18.96 | 24.03 |
| CDY69145 | Canola | nucleus, plastid | 22.94 | 23.81 |
| CDX81292 | Canola | nucleus | 20.49 | 23.76 |
| CDY53379 | Canola | nucleus | 15.9 | 23.74 |
| CDY37834 | Canola | nucleus | 21.71 | 23.36 |
| CDY09221 | Canola | nucleus | 18.35 | 23.26 |
| CDY16836 | Canola | nucleus | 18.96 | 23.22 |
| CDY33948 | Canola | nucleus | 21.41 | 23.18 |
| CDY40813 | Canola | nucleus | 19.88 | 22.97 |
| CDX80191 | Canola | nucleus | 18.04 | 22.96 |
| CDX71050 | Canola | nucleus | 17.74 | 22.92 |
| CDY70838 | Canola | nucleus | 21.41 | 22.88 |
| CDY42836 | Canola | nucleus | 19.88 | 22.73 |
| KRH21402 | Soybean | nucleus | 24.77 | 22.69 |
| CDY51722 | Canola | nucleus | 19.27 | 22.66 |
| CDY07156 | Canola | nucleus | 19.27 | 22.58 |
| CDY15624 | Canola | nucleus | 22.94 | 22.46 |
| CDX79743 | Canola | nucleus | 19.88 | 22.18 |
| CDY40213 | Canola | nucleus | 23.85 | 21.97 |
| CDY02191 | Canola | nucleus | 19.27 | 21.43 |
| CDX93365 | Canola | nucleus | 20.18 | 21.36 |
| CDX88742 | Canola | nucleus | 18.04 | 21.3 |
| CDX86775 | Canola | nucleus | 20.18 | 21.22 |
| CDY65260 | Canola | nucleus | 19.88 | 21.04 |
| CDX91370 | Canola | nucleus | 20.8 | 20.92 |
| CDX74947 | Canola | nucleus | 20.8 | 20.92 |
| CDX71704 | Canola | nucleus | 21.41 | 20.9 |
| CDY29082 | Canola | nucleus | 15.29 | 20.83 |
| CDX77212 | Canola | nucleus | 21.41 | 20.59 |
| CDY59600 | Canola | nucleus | 15.29 | 20.49 |
| CDX76102 | Canola | nucleus | 23.85 | 20.47 |
| CDY31735 | Canola | nucleus | 21.41 | 20.35 |
| CDX90602 | Canola | nucleus | 14.98 | 20.33 |
| CDY64622 | Canola | nucleus | 19.88 | 20.12 |
| EER97271 | Sorghum | nucleus | 21.71 | 20.06 |
| CDY41539 | Canola | nucleus | 22.32 | 19.95 |
| CDX78095 | Canola | nucleus | 14.68 | 19.83 |
| GSMUA_Achr10P... | Banana | nucleus | 21.1 | 19.83 |
| CDX80030 | Canola | nucleus | 22.02 | 19.78 |
| CDY50231 | Canola | nucleus | 15.29 | 19.76 |
| CDY04620 | Canola | nucleus | 15.29 | 19.68 |
| CDY00373 | Canola | nucleus | 15.6 | 19.62 |
| CDY61965 | Canola | nucleus | 18.65 | 19.61 |
| PGSC0003DMT400076447 | Potato | nucleus | 23.85 | 19.6 |
| CDX89134 | Canola | extracellular, vacuole | 20.8 | 19.54 |
| CDY61064 | Canola | nucleus | 15.6 | 19.54 |
| CDX77184 | Canola | nucleus | 15.29 | 19.53 |
| CDX95706 | Canola | nucleus | 22.02 | 19.51 |
| Zm00001d021591_P001 | Maize | nucleus | 21.41 | 19.44 |
| CDY27314 | Canola | nucleus | 21.41 | 19.44 |
| TraesCS2B01G249200.1 | Wheat | nucleus, plastid | 21.1 | 19.44 |
| CDY06274 | Canola | nucleus | 18.65 | 19.43 |
| CDY57876 | Canola | nucleus | 21.41 | 19.39 |
| TraesCS2D01G231600.1 | Wheat | nucleus | 21.1 | 19.38 |
| TraesCS2A01G225900.1 | Wheat | nucleus, plastid | 21.1 | 19.38 |
| CDX95139 | Canola | nucleus | 19.88 | 19.35 |
| Solyc02g077950.1.1 | Tomato | nucleus | 22.32 | 19.26 |
| CDY72657 | Canola | nucleus | 17.13 | 19.18 |
| CDY61727 | Canola | nucleus | 21.71 | 18.98 |
| CDX83357 | Canola | nucleus | 21.71 | 18.98 |
| CDY40358 | Canola | nucleus | 19.27 | 18.92 |
| CDY70704 | Canola | nucleus | 20.8 | 18.63 |
| CDY08392 | Canola | nucleus | 18.96 | 18.34 |
| Zm00001d006463_P001 | Maize | plastid | 19.57 | 18.23 |
| CDY55422 | Canola | nucleus | 21.71 | 17.71 |
| CDY55549 | Canola | nucleus | 21.41 | 17.41 |
| CDX80822 | Canola | nucleus | 21.41 | 17.24 |
| CDY04855 | Canola | nucleus | 21.41 | 17.24 |
| CDY71684 | Canola | nucleus | 17.43 | 17.01 |
| CDX87270 | Canola | nucleus | 17.43 | 16.72 |
| CDY71763 | Canola | nucleus | 17.43 | 16.62 |
| CDX92613 | Canola | nucleus | 17.43 | 16.62 |
| CDY00341 | Canola | nucleus | 18.65 | 16.58 |
| CDY03494 | Canola | nucleus | 17.43 | 16.57 |
| CDY16754 | Canola | nucleus | 17.13 | 16.47 |
| CDX84369 | Canola | nucleus | 18.35 | 16.17 |
| CDY35454 | Canola | nucleus | 16.51 | 15.79 |
| CDY08776 | Canola | nucleus | 3.36 | 12.79 |
| CDY24798 | Canola | nucleus | 17.13 | 12.36 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078FTM8 | UniProt:A0A078FTM8 | EnsemblPlants:CDY15678 | ProteinID:CDY15678 | ProteinID:CDY15678.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00089891001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF79 | UniParc:UPI0004EF2A58 | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
BnaA07g08490DBnaA07g08490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FTM8]
Coordinates
chrLK032056:+:400427..402174
Molecular Weight (calculated)
35358.4 Da
IEP (calculated)
10.028
GRAVY (calculated)
-0.604
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MFGNCDQKKK MPSISSPNTN PLAIMQSKNM IVAPSHQQQQ QQQAHQQQPQ LKCPRCDSSN TKFCYYNNYS LSQPRHFCKA CKRYWTRGGT LRNVPVGGSY
101: RKNKRVKRPA TAASTVSKTT SSSPNHQISH FSSMNHHPML YGLSDHVSSC NSLPMIPSRF NDSSKTSSSG LESEFFSSGF SGLGALGLGF PHHMSHDHTA
201: INGGFINNST ANKPFLLSGL FGSSVSSSSS SHLQHPHKAM NNGGEMMGQS HLQTLASLQD LHVGGNNEDV NKLGKLGQIS GTISGFMSPS SLDPSNSNNI
301: WNNASVVNGG WLDPTNNNVG SSLTSLI
101: RKNKRVKRPA TAASTVSKTT SSSPNHQISH FSSMNHHPML YGLSDHVSSC NSLPMIPSRF NDSSKTSSSG LESEFFSSGF SGLGALGLGF PHHMSHDHTA
201: INGGFINNST ANKPFLLSGL FGSSVSSSSS SHLQHPHKAM NNGGEMMGQS HLQTLASLQD LHVGGNNEDV NKLGKLGQIS GTISGFMSPS SLDPSNSNNI
301: WNNASVVNGG WLDPTNNNVG SSLTSLI
001: MFGNCDQNKK MPIISSPNTN PLASMQSKNM IVASSHQQQQ QQQPQQPQPQ LKCPRCDSSN TKFCYYNNYS LSQPRHFCKA CKRYWTRGGT LRNVPVGGSY
101: RKNKRVKRPS TATTTTASTV STTNSSSPNN PHQISHFSSM NHHPLFYGLS DHMSSCNNNL PMIPSRFSDS SKTCSSSGLE SEFLSSGFSS LSALGLGLPH
201: QMSHDHTING SFINNSTTNK PFLLSGLFGS SMSSSSTLLQ HPHKPMNNGG DMLGQSHLQT LASLQDLHVG GNNEDMKYKE GKLDQISGNI NGFMSSSSSL
301: DPSNYNNMWN NASVVNGAWL DPTNNNVGSS LTSLI
101: RKNKRVKRPS TATTTTASTV STTNSSSPNN PHQISHFSSM NHHPLFYGLS DHMSSCNNNL PMIPSRFSDS SKTCSSSGLE SEFLSSGFSS LSALGLGLPH
201: QMSHDHTING SFINNSTTNK PFLLSGLFGS SMSSSSTLLQ HPHKPMNNGG DMLGQSHLQT LASLQDLHVG GNNEDMKYKE GKLDQISGNI NGFMSSSSSL
301: DPSNYNNMWN NASVVNGAWL DPTNNNVGSS LTSLI
Arabidopsis Description
Dof-type zinc finger DNA-binding family protein [Source:TAIR;Acc:AT1G28310]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.