Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70838 | Canola | nucleus | 98.84 | 27.78 |
| CDY70312 | Canola | nucleus | 83.72 | 25.35 |
| CDY33948 | Canola | nucleus | 79.07 | 22.52 |
| CDY37834 | Canola | nucleus | 79.07 | 22.37 |
| CDX81292 | Canola | nucleus | 69.77 | 21.28 |
| TraesCS6A01G233700.1 | Wheat | cytosol, mitochondrion, nucleus | 11.63 | 4.61 |
| TraesCS1B01G185700.1 | Wheat | cytosol | 11.63 | 4.61 |
| PGSC0003DMT400058729 | Potato | nucleus | 9.3 | 4.06 |
| CDX74947 | Canola | nucleus | 15.12 | 4.0 |
| CDX91370 | Canola | nucleus | 15.12 | 4.0 |
| HORVU2Hr1G047750.4 | Barley | plastid | 10.47 | 3.98 |
| CDY65260 | Canola | nucleus | 13.95 | 3.88 |
| CDX93365 | Canola | nucleus | 13.95 | 3.88 |
| CDY15678 | Canola | nucleus | 12.79 | 3.36 |
| CDX95139 | Canola | nucleus | 12.79 | 3.27 |
| CDX88742 | Canola | nucleus | 10.47 | 3.25 |
| CDY40813 | Canola | nucleus | 10.47 | 3.18 |
| CDX90142 | Canola | nucleus | 11.63 | 3.16 |
| CDY42836 | Canola | nucleus | 10.47 | 3.15 |
| CDX77184 | Canola | nucleus | 9.3 | 3.12 |
| CDX80191 | Canola | nucleus | 9.3 | 3.11 |
| CDY09221 | Canola | nucleus | 9.3 | 3.1 |
| CDY08775 | Canola | nucleus | 6.98 | 3.06 |
| CDY02191 | Canola | nucleus | 10.47 | 3.06 |
| CDY66590 | Canola | nucleus | 11.63 | 3.06 |
| CDY72049 | Canola | nucleus | 10.47 | 3.03 |
| CDY70666 | Canola | nucleus | 10.47 | 3.03 |
| CDX80822 | Canola | nucleus | 13.95 | 2.96 |
| CDX77212 | Canola | nucleus | 11.63 | 2.94 |
| CDY31735 | Canola | nucleus | 11.63 | 2.91 |
| CDY07781 | Canola | nucleus | 6.98 | 2.8 |
| CDY27314 | Canola | nucleus | 11.63 | 2.78 |
| CDX71050 | Canola | nucleus | 8.14 | 2.77 |
| CDY55422 | Canola | nucleus | 12.79 | 2.74 |
| CDY53379 | Canola | nucleus | 6.98 | 2.74 |
| CDY72657 | Canola | nucleus | 9.3 | 2.74 |
| CDY55549 | Canola | nucleus | 12.79 | 2.74 |
| CDX79743 | Canola | nucleus | 9.3 | 2.73 |
| CDY31568 | Canola | nucleus | 8.14 | 2.71 |
| CDX84369 | Canola | nucleus | 11.63 | 2.7 |
| CDY61727 | Canola | nucleus | 11.63 | 2.67 |
| CDY69145 | Canola | nucleus, plastid | 9.3 | 2.54 |
| CDY51722 | Canola | nucleus | 8.14 | 2.52 |
| CDY07156 | Canola | nucleus | 8.14 | 2.51 |
| CDX80030 | Canola | nucleus | 10.47 | 2.47 |
| CDY70704 | Canola | nucleus | 10.47 | 2.47 |
| Solyc02g078620.1.1 | Tomato | nucleus | 8.14 | 2.46 |
| CDY04855 | Canola | nucleus | 11.63 | 2.46 |
| CDY41539 | Canola | nucleus | 10.47 | 2.46 |
| CDY00341 | Canola | nucleus | 10.47 | 2.45 |
| VIT_00s0652g00010.t01 | Wine grape | nucleus | 8.14 | 2.37 |
| CDY16754 | Canola | nucleus | 9.3 | 2.35 |
| CDX87270 | Canola | nucleus | 9.3 | 2.35 |
| CDY03494 | Canola | nucleus | 9.3 | 2.33 |
| CDX73385 | Canola | nucleus | 8.14 | 2.32 |
| GSMUA_Achr1P17670_001 | Banana | nucleus | 5.81 | 2.3 |
| CDX86775 | Canola | nucleus | 8.14 | 2.25 |
| CDY16836 | Canola | nucleus | 6.98 | 2.25 |
| CDY06274 | Canola | nucleus | 8.14 | 2.23 |
| CDY64622 | Canola | nucleus | 8.14 | 2.17 |
| CDX76102 | Canola | nucleus | 9.3 | 2.1 |
| CDY15624 | Canola | nucleus | 8.14 | 2.1 |
| CDX71704 | Canola | nucleus | 8.14 | 2.09 |
| CDY71684 | Canola | nucleus | 8.14 | 2.09 |
| CDY08392 | Canola | nucleus | 8.14 | 2.07 |
| CDY35454 | Canola | nucleus | 8.14 | 2.05 |
| CDX92613 | Canola | nucleus | 8.14 | 2.04 |
| CDY71763 | Canola | nucleus | 8.14 | 2.04 |
| CDX89134 | Canola | extracellular, vacuole | 8.14 | 2.01 |
| CDY35729 | Canola | nucleus | 6.98 | 2.01 |
| CDX87189 | Canola | nucleus | 5.81 | 2.0 |
| CDY40213 | Canola | nucleus | 8.14 | 1.97 |
| CDY57876 | Canola | nucleus | 8.14 | 1.94 |
| CDY61965 | Canola | nucleus | 6.98 | 1.93 |
| CDX95706 | Canola | nucleus | 8.14 | 1.9 |
| CDX83357 | Canola | nucleus | 8.14 | 1.87 |
| CDY40358 | Canola | nucleus | 6.98 | 1.8 |
| GSMUA_Achr5P12010_001 | Banana | nucleus | 6.98 | 1.69 |
| CDY50231 | Canola | nucleus | 4.65 | 1.58 |
| CDY04620 | Canola | nucleus | 4.65 | 1.57 |
| CDY24798 | Canola | nucleus | 8.14 | 1.55 |
| CDY00373 | Canola | nucleus | 4.65 | 1.54 |
| CDY61064 | Canola | nucleus | 4.65 | 1.53 |
| CDY29082 | Canola | nucleus | 3.49 | 1.25 |
| CDX90602 | Canola | nucleus | 3.49 | 1.24 |
| CDY59600 | Canola | nucleus | 3.49 | 1.23 |
| CDX78095 | Canola | nucleus | 2.33 | 0.83 |
| CDY70840 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY08776 | EnsemblPlantsGene:GSBRNA2T00000711001 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF82 | ProteinID:CDY08776 | ProteinID:CDY08776.1 |
| UniParc:UPI0004EDD4A2 | UniProt:A0A078F5T4 | MapMan:35.1 | : | : | : |
Description
BnaA06g24480DBnaA06g24480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F5T4]
Coordinates
chrLK031989:+:327762..328022
Molecular Weight (calculated)
9632.9 Da
IEP (calculated)
4.232
GRAVY (calculated)
-0.976
Length
86 amino acids
Sequence
(BLAST)
(BLAST)
1: MAMLFGSSKE ETVVVERPQP ILYRNLDIVN SSQSPTKKGD NQTEWYFGNN NDTEGVANNN NNTGGSEQWN NGVQAWTDLN HYNALP
001: MSSHTNLPSP KPVPKPDHRI SGTSQTKKPP SSSVAQDQQN LKCPRCNSPN TKFCYYNNYS LSQPRHFCKS CRRYWTRGGA LRNVPIGGGC RKTKKSIKPN
101: SSMNTLPSSS SSQRFFSSIM EDSSKFFPPP TTMDFQLAGL SLNKMNDLQL LNNQEVLDLR PMMSSGRENT PVDVGSGLSL MGFGDFNNNH SPTGFTTAGA
201: SDGNLASSIE TLSCLNQDLH WRLQQQRMAM LFGNSKEETV VVERPQPILY RNLEIVNSSS PSSPTKKGDN QTEWYFGNNS DNEGVISNNA NTGGGGSEWN
301: NGIQAWTDLN HYNALP
101: SSMNTLPSSS SSQRFFSSIM EDSSKFFPPP TTMDFQLAGL SLNKMNDLQL LNNQEVLDLR PMMSSGRENT PVDVGSGLSL MGFGDFNNNH SPTGFTTAGA
201: SDGNLASSIE TLSCLNQDLH WRLQQQRMAM LFGNSKEETV VVERPQPILY RNLEIVNSSS PSSPTKKGDN QTEWYFGNNS DNEGVISNNA NTGGGGSEWN
301: NGIQAWTDLN HYNALP
Arabidopsis Description
DOF5.7SCAP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UIB2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.